RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 TNP2Q05952 138 aa12.06□□□□□ -0.48
LTBP4-201ENST00000204005 CYP4F30PQ9H0H9 118 aa12.06□□□□□ -0.48
LTBP4-201ENST00000204005 TNRC18O15417 2968 aaPredicted RBP12.06□□□□□ -0.48
LTBP4-201ENST00000204005 DMXL2Q8TDJ6 3036 aa12.04□□□□□ -0.48
LTBP4-201ENST00000204005 ITPR1Q14643 2758 aa12.04□□□□□ -0.48
LTBP4-201ENST00000204005 COL12A1Q99715 3063 aa12.03□□□□□ -0.48
LTBP4-201ENST00000204005 NBEAQ8NFP9 2946 aa12.02□□□□□ -0.48
LTBP4-201ENST00000204005 BOD1L1Q8NFC6 3051 aa12.02□□□□□ -0.48
LTBP4-201ENST00000204005 DSCR10P59022 87 aa12.01□□□□□ -0.49
LTBP4-201ENST00000204005 NBEAL2Q6ZNJ1 2754 aa12.01□□□□□ -0.49
LTBP4-201ENST00000204005 ADGRG4Q8IZF6 3080 aa12.01□□□□□ -0.49
LTBP4-201ENST00000204005 NBEAL1Q6ZS30 2694 aa12.01□□□□□ -0.49
LTBP4-201ENST00000204005 ATP11AUNQ6ZP68 121 aa12□□□□□ -0.49
LTBP4-201ENST00000204005 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.99□□□□□ -0.49
LTBP4-201ENST00000204005 SPANXA2-OT1Q8N9U9 137 aa11.97□□□□□ -0.49
LTBP4-201ENST00000204005 CYSTM1Q9H1C7 97 aa11.97□□□□□ -0.49
LTBP4-201ENST00000204005 ITPR2Q14571 2701 aa11.95□□□□□ -0.5
LTBP4-201ENST00000204005 TACC2O95359 2948 aa11.93□□□□□ -0.5
LTBP4-201ENST00000204005 J3QL48 77 aa11.92□□□□□ -0.5
LTBP4-201ENST00000204005 SPRR1AP35321 89 aa11.9□□□□□ -0.5
LTBP4-201ENST00000204005 KALRNO60229 2985 aa11.9□□□□□ -0.5
LTBP4-201ENST00000204005 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
LTBP4-201ENST00000204005 KRTAP1-5Q9BYS1 174 aa11.87□□□□□ -0.51
LTBP4-201ENST00000204005 PLAC8Q9NZF1 115 aa11.86□□□□□ -0.51
LTBP4-201ENST00000204005 UTP20O75691 2785 aaKnown RBP11.85□□□□□ -0.51
LTBP4-201ENST00000204005 NSD1Q96L73 2696 aaPredicted RBP11.84□□□□□ -0.51
LTBP4-201ENST00000204005 CD164Q04900 197 aa11.84□□□□□ -0.51
LTBP4-201ENST00000204005 C9orf92A6NGG3 77 aa11.83□□□□□ -0.52
LTBP4-201ENST00000204005 LRBAP50851 2863 aa11.82□□□□□ -0.52
LTBP4-201ENST00000204005 FREM2Q5SZK8 3169 aa11.82□□□□□ -0.52
LTBP4-201ENST00000204005 Q5XG85 94 aa11.82□□□□□ -0.52
LTBP4-201ENST00000204005 IGLV8-61A0A075B6I0 122 aa11.82□□□□□ -0.52
LTBP4-201ENST00000204005 Q1T7F1 81 aa11.81□□□□□ -0.52
LTBP4-201ENST00000204005 SPTBN5Q9NRC6 3674 aaKnown RBP11.8□□□□□ -0.52
LTBP4-201ENST00000204005 UQCR11O14957 56 aa11.79□□□□□ -0.52
LTBP4-201ENST00000204005 HIVEP1P15822 2718 aa11.78□□□□□ -0.52
LTBP4-201ENST00000204005 ZZEF1O43149 2961 aa11.75□□□□□ -0.53
LTBP4-201ENST00000204005 FAM229BQ4G0N7 80 aa11.75□□□□□ -0.53
LTBP4-201ENST00000204005 EYSQ5T1H1 3165 aa11.75□□□□□ -0.53
LTBP4-201ENST00000204005 REV3LO60673 3130 aa11.74□□□□□ -0.53
LTBP4-201ENST00000204005 DMXL1Q9Y485 3027 aa11.74□□□□□ -0.53
LTBP4-201ENST00000204005 APCP25054 2843 aa11.73□□□□□ -0.53
LTBP4-201ENST00000204005 FP248Q71RG6 208 aaPredicted RBP11.73□□□□□ -0.53
LTBP4-201ENST00000204005 SPRR1BP22528 89 aa11.72□□□□□ -0.53
LTBP4-201ENST00000204005 IGLV7-46A0A075B6I9 117 aa11.7□□□□□ -0.54
LTBP4-201ENST00000204005 MIR22HGQ0VDD5 57 aa11.68□□□□□ -0.54
LTBP4-201ENST00000204005 PRR26Q8N8Z3 221 aa11.68□□□□□ -0.54
LTBP4-201ENST00000204005 MMP24-AS1A0A0U1RRL7 71 aa11.68□□□□□ -0.54
LTBP4-201ENST00000204005 OXTP01178 125 aa11.66□□□□□ -0.54
LTBP4-201ENST00000204005 CDC42SE1Q9NRR8 79 aa11.66□□□□□ -0.54
LTBP4-201ENST00000204005 KTN1-AS1Q86SY8 53 aa11.65□□□□□ -0.54
LTBP4-201ENST00000204005 SPEGQ15772 3267 aa11.64□□□□□ -0.55
LTBP4-201ENST00000204005 KMT2BQ9UMN6 2715 aaPredicted RBP11.63□□□□□ -0.55
LTBP4-201ENST00000204005 LINC00472Q9H8W2 130 aa11.63□□□□□ -0.55
LTBP4-201ENST00000204005 STAB2Q8WWQ8 2551 aa11.61□□□□□ -0.55
LTBP4-201ENST00000204005 ZANQ9Y493 2812 aa11.6□□□□□ -0.55
LTBP4-201ENST00000204005 NIPBLQ6KC79 2804 aaeCLIP11.58□□□□□ -0.566e-7■□□□□ 10.3
LTBP4-201ENST00000204005 KRTAP4-16G5E9R7 235 aaPredicted RBP11.58□□□□□ -0.56
LTBP4-201ENST00000204005 COX6B2Q6YFQ2 88 aa11.57□□□□□ -0.56
LTBP4-201ENST00000204005 Q8N9P0 234 aaPredicted RBP11.56□□□□□ -0.56
LTBP4-201ENST00000204005 LCE6AA0A183 80 aa11.55□□□□□ -0.56
LTBP4-201ENST00000204005 Q6ZR54 194 aa11.55□□□□□ -0.56
LTBP4-201ENST00000204005 USP34Q70CQ2 3546 aa11.55□□□□□ -0.56
LTBP4-201ENST00000204005 Q75L30 129 aa11.54□□□□□ -0.56
LTBP4-201ENST00000204005 KRTAP10-2P60368 255 aa11.52□□□□□ -0.56
LTBP4-201ENST00000204005 KRTAP10-1P60331 282 aa11.52□□□□□ -0.56
LTBP4-201ENST00000204005 Q8N1X5 172 aa11.5□□□□□ -0.57
LTBP4-201ENST00000204005 RBM12B-AS1Q9P1G2 102 aa11.5□□□□□ -0.57
LTBP4-201ENST00000204005 HRES1P13985 223 aa11.49□□□□□ -0.57
LTBP4-201ENST00000204005 CFAP47Q6ZTR5 3102 aa11.49□□□□□ -0.57
LTBP4-201ENST00000204005 LINC01558Q9Y6Z2 57 aa11.48□□□□□ -0.57
LTBP4-201ENST00000204005 LCA10Q71F78 164 aa11.48□□□□□ -0.57
LTBP4-201ENST00000204005 PANO1I0J062 215 aa11.47□□□□□ -0.57
LTBP4-201ENST00000204005 LOC400499M0QZD8 3231 aa11.47□□□□□ -0.57
LTBP4-201ENST00000204005 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
LTBP4-201ENST00000204005 CELSR2Q9HCU4 2923 aa11.44□□□□□ -0.58
LTBP4-201ENST00000204005 ASH1LQ9NR48 2969 aaKnown RBP11.43□□□□□ -0.58
LTBP4-201ENST00000204005 Q5VV11 94 aa11.43□□□□□ -0.58
LTBP4-201ENST00000204005 LINC00483Q53H64 154 aa11.42□□□□□ -0.58
LTBP4-201ENST00000204005 TENM4Q6N022 2769 aa11.39□□□□□ -0.59
LTBP4-201ENST00000204005 KRTAP29-1A8MX34 341 aaPredicted RBP11.37□□□□□ -0.59
LTBP4-201ENST00000204005 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
LTBP4-201ENST00000204005 Q6ZRN7 208 aaPredicted RBP11.36□□□□□ -0.59
LTBP4-201ENST00000204005 Q6ZSA8 131 aa11.36□□□□□ -0.59
LTBP4-201ENST00000204005 Q5W150 140 aa11.33□□□□□ -0.6
LTBP4-201ENST00000204005 DCHS2Q6V1P9 2916 aa11.33□□□□□ -0.6
LTBP4-201ENST00000204005 Q5VSD8 79 aa11.3□□□□□ -0.6
LTBP4-201ENST00000204005 SPINT4Q6UDR6 99 aa11.27□□□□□ -0.61
LTBP4-201ENST00000204005 NF1P21359 2839 aa11.27□□□□□ -0.61
LTBP4-201ENST00000204005 KRTAP7-1Q8IUC3 87 aa11.26□□□□□ -0.61
LTBP4-201ENST00000204005 MYO15AQ9UKN7 3530 aa11.24□□□□□ -0.61
LTBP4-201ENST00000204005 CRYBG3Q68DQ2 2970 aa11.24□□□□□ -0.61
LTBP4-201ENST00000204005 SPINK7P58062 85 aa11.23□□□□□ -0.61
LTBP4-201ENST00000204005 KRTAP21-3Q3LHN1 58 aa11.23□□□□□ -0.61
LTBP4-201ENST00000204005 KRTAP11-1Q8IUC1 163 aa11.22□□□□□ -0.61
LTBP4-201ENST00000204005 FBN2P35556 2912 aa11.2□□□□□ -0.62
LTBP4-201ENST00000204005 CRIPTQ9P021 101 aa11.18□□□□□ -0.62
LTBP4-201ENST00000204005 FLG2Q5D862 2391 aaPredicted RBP11.18□□□□□ -0.62
LTBP4-201ENST00000204005 A0A087X002 238 aa11.18□□□□□ -0.62
LTBP4-201ENST00000204005 A0A1B0GU33 70 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms