RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C4orf26Q17RF5 130 aa9.62□□□□□ -0.87
SCARB2-221ENST00000640341 HRCT1Q6UXD1 115 aa9.62□□□□□ -0.87
SCARB2-221ENST00000640341 C11orf45Q8TAV5 145 aa9.61□□□□□ -0.87
SCARB2-221ENST00000640341 SERTAD4-AS1Q5TG53 156 aa9.61□□□□□ -0.87
SCARB2-221ENST00000640341 MRAPQ8TCY5 172 aa9.61□□□□□ -0.87
SCARB2-221ENST00000640341 RMI2Q96E14 147 aa9.6□□□□□ -0.87
SCARB2-221ENST00000640341 OXTP01178 125 aa9.6□□□□□ -0.87
SCARB2-221ENST00000640341 PDE6GP18545 87 aa9.6□□□□□ -0.87
SCARB2-221ENST00000640341 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
SCARB2-221ENST00000640341 FAM168BA1KXE4 195 aa9.59□□□□□ -0.87
SCARB2-221ENST00000640341 TRBV7-4A0A0J9YYF1 115 aa9.59□□□□□ -0.87
SCARB2-221ENST00000640341 TM2D3Q9BRN9 247 aa9.59□□□□□ -0.87
SCARB2-221ENST00000640341 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
SCARB2-221ENST00000640341 RPS28P62857 69 aaKnown RBP9.57□□□□□ -0.88
SCARB2-221ENST00000640341 NREPQ16612 68 aa9.57□□□□□ -0.88
SCARB2-221ENST00000640341 CASC10Q5T4H9 136 aa9.57□□□□□ -0.88
SCARB2-221ENST00000640341 BPY2O14599 106 aa9.57□□□□□ -0.88
SCARB2-221ENST00000640341 C7orf33Q8WU49 177 aa9.57□□□□□ -0.88
SCARB2-221ENST00000640341 TRAV7A0A075B6U4 112 aa9.56□□□□□ -0.88
SCARB2-221ENST00000640341 FAM236DA0A1B0GTK5 79 aa9.54□□□□□ -0.88
SCARB2-221ENST00000640341 FAM236CP0DP71 79 aa9.54□□□□□ -0.88
SCARB2-221ENST00000640341 CXCL6P80162 114 aa9.54□□□□□ -0.88
SCARB2-221ENST00000640341 F8WEM9 126 aa9.53□□□□□ -0.88
SCARB2-221ENST00000640341 CSMD3Q7Z407 3707 aa9.53□□□□□ -0.88
SCARB2-221ENST00000640341 LINC01556Q5JQF7 62 aa9.53□□□□□ -0.88
SCARB2-221ENST00000640341 ST20-AS1Q8NBB2 130 aa9.53□□□□□ -0.88
SCARB2-221ENST00000640341 H3BQ85 93 aa9.52□□□□□ -0.89
SCARB2-221ENST00000640341 ETDCA0A1B0GVM5 59 aa9.52□□□□□ -0.89
SCARB2-221ENST00000640341 H7BZZ5 65 aa9.51□□□□□ -0.89
SCARB2-221ENST00000640341 H3BNG1 76 aa9.5□□□□□ -0.89
SCARB2-221ENST00000640341 Q8N377 158 aa9.5□□□□□ -0.89
SCARB2-221ENST00000640341 UBE2BP63146 152 aa9.5□□□□□ -0.89
SCARB2-221ENST00000640341 A0A0G2JQZ4 141 aa9.49□□□□□ -0.89
SCARB2-221ENST00000640341 TRBV7-6A0A0J9YX20 115 aa9.49□□□□□ -0.89
SCARB2-221ENST00000640341 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
SCARB2-221ENST00000640341 KRTAP24-1Q3LI83 254 aa9.49□□□□□ -0.89
SCARB2-221ENST00000640341 WIPF1O43516 503 aa9.48□□□□□ -0.89
SCARB2-221ENST00000640341 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
SCARB2-221ENST00000640341 LINC00588Q9Y4M8 146 aa9.47□□□□□ -0.89
SCARB2-221ENST00000640341 STAB2Q8WWQ8 2551 aa9.47□□□□□ -0.89
SCARB2-221ENST00000640341 KCNQ1DNQ9H478 68 aa9.46□□□□□ -0.89
SCARB2-221ENST00000640341 FUSP35637 526 aaKnown RBP eCLIP9.46□□□□□ -0.9
SCARB2-221ENST00000640341 Q9BRP9 147 aa9.46□□□□□ -0.9
SCARB2-221ENST00000640341 TENM2Q9NT68 2774 aa9.45□□□□□ -0.9
SCARB2-221ENST00000640341 ERC2-IT1O76042 136 aa9.44□□□□□ -0.9
SCARB2-221ENST00000640341 IGKV4-1P06312 121 aa9.44□□□□□ -0.9
SCARB2-221ENST00000640341 C1orf137Q5JT78 98 aa9.44□□□□□ -0.9
SCARB2-221ENST00000640341 Q6ZRX8 168 aa9.44□□□□□ -0.9
SCARB2-221ENST00000640341 Q5XG85 94 aa9.43□□□□□ -0.9
SCARB2-221ENST00000640341 SRRM2Q9UQ35 2752 aaKnown RBP9.43□□□□□ -0.9
SCARB2-221ENST00000640341 TMEM254Q8TBM7 123 aa9.43□□□□□ -0.9
SCARB2-221ENST00000640341 FAM30AQ9NZY2 134 aa9.43□□□□□ -0.9
SCARB2-221ENST00000640341 KLKP1Q107X0 134 aa9.43□□□□□ -0.9
SCARB2-221ENST00000640341 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
SCARB2-221ENST00000640341 DNAH10OSP0CZ25 163 aa9.42□□□□□ -0.9
SCARB2-221ENST00000640341 A0A1W2PNM2 257 aa9.4□□□□□ -0.9
SCARB2-221ENST00000640341 IGLV1-50A0A075B6I6 118 aa9.4□□□□□ -0.9
SCARB2-221ENST00000640341 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-221ENST00000640341 MRPL55Q7Z7F7 128 aaKnown RBP9.4□□□□□ -0.9
SCARB2-221ENST00000640341 DHRS4-AS1Q9P1J3 65 aa9.4□□□□□ -0.9
SCARB2-221ENST00000640341 SMIM29Q86T20 159 aa9.39□□□□□ -0.91
SCARB2-221ENST00000640341 HIGD2AQ9BW72 106 aa9.39□□□□□ -0.91
SCARB2-221ENST00000640341 PRLHP81277 87 aa9.38□□□□□ -0.91
SCARB2-221ENST00000640341 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
SCARB2-221ENST00000640341 PSCAO43653 123 aa9.37□□□□□ -0.91
SCARB2-221ENST00000640341 BCE1O60756 84 aa9.37□□□□□ -0.91
SCARB2-221ENST00000640341 SERP1Q9Y6X1 66 aa9.36□□□□□ -0.91
SCARB2-221ENST00000640341 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
SCARB2-221ENST00000640341 LYSTQ99698 3801 aa9.35□□□□□ -0.91
SCARB2-221ENST00000640341 IGLV5-48A0A075B6I7 105 aa9.35□□□□□ -0.91
SCARB2-221ENST00000640341 PRYO14603 147 aa9.34□□□□□ -0.91
SCARB2-221ENST00000640341 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
SCARB2-221ENST00000640341 LINC00336Q6ZUF6 198 aa9.33□□□□□ -0.92
SCARB2-221ENST00000640341 A0A096LNI7 61 aa9.33□□□□□ -0.92
SCARB2-221ENST00000640341 MPLKIPQ8TAP9 179 aa9.33□□□□□ -0.92
SCARB2-221ENST00000640341 K7EQZ3 153 aa9.32□□□□□ -0.92
SCARB2-221ENST00000640341 Q8NBF4 154 aa9.32□□□□□ -0.92
SCARB2-221ENST00000640341 OCR1Q9BZK8 76 aa9.32□□□□□ -0.92
SCARB2-221ENST00000640341 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
SCARB2-221ENST00000640341 KRTAP4-16G5E9R7 235 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-221ENST00000640341 TLX1NBP0CAT3 122 aa9.31□□□□□ -0.92
SCARB2-221ENST00000640341 F8WDY8 70 aa9.31□□□□□ -0.92
SCARB2-221ENST00000640341 DNAH10Q8IVF4 4471 aa9.31□□□□□ -0.92
SCARB2-221ENST00000640341 PRR4Q16378 134 aa9.31□□□□□ -0.92
SCARB2-221ENST00000640341 LRCOL1A6NCL2 159 aa9.3□□□□□ -0.92
SCARB2-221ENST00000640341 LINC00476Q8WZB0 136 aa9.3□□□□□ -0.92
SCARB2-221ENST00000640341 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
SCARB2-221ENST00000640341 CHTF8P0CG12 524 aa9.3□□□□□ -0.92
SCARB2-221ENST00000640341 UBE2DNLQ8IWF7 75 aa9.3□□□□□ -0.92
SCARB2-221ENST00000640341 NDUFC1O43677 76 aa9.29□□□□□ -0.92
SCARB2-221ENST00000640341 WFDC13Q8IUB5 93 aa9.29□□□□□ -0.92
SCARB2-221ENST00000640341 BRK1Q8WUW1 75 aa9.29□□□□□ -0.92
SCARB2-221ENST00000640341 EPM2AB3EWF7 344 aa9.28□□□□□ -0.92
SCARB2-221ENST00000640341 A0A087WSZ3 146 aa9.28□□□□□ -0.92
SCARB2-221ENST00000640341 SPRR1AP35321 89 aa9.28□□□□□ -0.92
SCARB2-221ENST00000640341 KRTAP1-5Q9BYS1 174 aa9.28□□□□□ -0.92
SCARB2-221ENST00000640341 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.92
SCARB2-221ENST00000640341 A0A0U1RQV1 116 aa9.27□□□□□ -0.92
SCARB2-221ENST00000640341 K7EIL1 84 aa9.27□□□□□ -0.93
SCARB2-221ENST00000640341 DSCR10P59022 87 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms