RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 MOBPQ13875 183 aa9.29□□□□□ -0.92
COLCA2-207ENST00000639470 TPRXLQ17RH7 258 aa9.29□□□□□ -0.92
COLCA2-207ENST00000639470 CDIP1Q9H305 208 aa9.29□□□□□ -0.92
COLCA2-207ENST00000639470 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
COLCA2-207ENST00000639470 Q6ZRX8 168 aa9.28□□□□□ -0.92
COLCA2-207ENST00000639470 LITAFQ99732 161 aa9.28□□□□□ -0.92
COLCA2-207ENST00000639470 MIEN1Q9BRT3 115 aa9.28□□□□□ -0.92
COLCA2-207ENST00000639470 ST20-AS1Q8NBB2 130 aa9.27□□□□□ -0.93
COLCA2-207ENST00000639470 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
COLCA2-207ENST00000639470 HIST3H2BBQ8N257 126 aa9.26□□□□□ -0.93
COLCA2-207ENST00000639470 TRAV23DV6A0A075B6W5 121 aa9.25□□□□□ -0.93
COLCA2-207ENST00000639470 NDUFC2O95298 119 aa9.25□□□□□ -0.93
COLCA2-207ENST00000639470 SPAG11AQ6PDA7 123 aa9.25□□□□□ -0.93
COLCA2-207ENST00000639470 S100A2P29034 98 aa9.24□□□□□ -0.93
COLCA2-207ENST00000639470 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
COLCA2-207ENST00000639470 LINC01545Q5VT33 79 aa9.24□□□□□ -0.93
COLCA2-207ENST00000639470 PET117Q6UWS5 81 aa9.24□□□□□ -0.93
COLCA2-207ENST00000639470 C3orf79P0CE67 100 aa9.23□□□□□ -0.93
COLCA2-207ENST00000639470 ZNF73O43830 326 aaPredicted RBP9.22□□□□□ -0.93
COLCA2-207ENST00000639470 KRTDAPP60985 99 aa9.22□□□□□ -0.93
COLCA2-207ENST00000639470 S100A12P80511 92 aa9.22□□□□□ -0.93
COLCA2-207ENST00000639470 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
COLCA2-207ENST00000639470 HIST1H2BLQ99880 126 aa9.22□□□□□ -0.93
COLCA2-207ENST00000639470 SNRPEP62304 92 aaKnown RBP9.21□□□□□ -0.94
COLCA2-207ENST00000639470 KRTAP13-3Q3SY46 172 aa9.21□□□□□ -0.94
COLCA2-207ENST00000639470 C5orf52A6NGY3 159 aa9.2□□□□□ -0.94
COLCA2-207ENST00000639470 CTAG1AP78358 180 aa9.2□□□□□ -0.94
COLCA2-207ENST00000639470 C20orf202A1L168 122 aa9.19□□□□□ -0.94
COLCA2-207ENST00000639470 ZNF815PA8K554 130 aa9.19□□□□□ -0.94
COLCA2-207ENST00000639470 LCE2AQ5TA79 106 aaPredicted RBP9.19□□□□□ -0.94
COLCA2-207ENST00000639470 OR13C6PQ8NH95 151 aa9.19□□□□□ -0.94
COLCA2-207ENST00000639470 SPINK1P00995 79 aa9.18□□□□□ -0.94
COLCA2-207ENST00000639470 MUC17Q685J3 4493 aa9.18□□□□□ -0.94
COLCA2-207ENST00000639470 Q8N377 158 aa9.18□□□□□ -0.94
COLCA2-207ENST00000639470 C9orf153Q5TBE3 101 aa9.17□□□□□ -0.94
COLCA2-207ENST00000639470 FP248Q71RG6 208 aaPredicted RBP9.17□□□□□ -0.94
COLCA2-207ENST00000639470 ATOH7Q8N100 152 aa9.17□□□□□ -0.94
COLCA2-207ENST00000639470 KRTAP4-1Q9BYQ7 146 aa9.17□□□□□ -0.94
COLCA2-207ENST00000639470 AKR1D1P51857 326 aa9.16□□□□□ -0.94
COLCA2-207ENST00000639470 ANKRD39Q53RE8 183 aa9.16□□□□□ -0.94
COLCA2-207ENST00000639470 SPANXCQ9NY87 97 aa9.16□□□□□ -0.94
COLCA2-207ENST00000639470 SSBP3-AS1Q7Z2R9 100 aa9.15□□□□□ -0.94
COLCA2-207ENST00000639470 TIMM17BO60830 172 aa9.14□□□□□ -0.95
COLCA2-207ENST00000639470 FAT4Q6V0I7 4981 aa9.13□□□□□ -0.95
COLCA2-207ENST00000639470 A0A0U1RQV1 116 aa9.13□□□□□ -0.95
COLCA2-207ENST00000639470 JOSD1Q15040 202 aaPredicted RBP9.13□□□□□ -0.95
COLCA2-207ENST00000639470 TMA7Q9Y2S6 64 aaKnown RBP9.13□□□□□ -0.95
COLCA2-207ENST00000639470 HRCT1Q6UXD1 115 aa9.11□□□□□ -0.95
COLCA2-207ENST00000639470 C6orf99Q4VX62 202 aa9.1□□□□□ -0.95
COLCA2-207ENST00000639470 PCP2Q8IVA1 136 aa9.09□□□□□ -0.95
COLCA2-207ENST00000639470 SPANXDQ9BXN6 97 aa9.09□□□□□ -0.95
COLCA2-207ENST00000639470 A0A0G2JQZ4 141 aa9.07□□□□□ -0.96
COLCA2-207ENST00000639470 SPRR1BP22528 89 aa9.07□□□□□ -0.96
COLCA2-207ENST00000639470 COX7BP24311 80 aa9.07□□□□□ -0.96
COLCA2-207ENST00000639470 HINT1P49773 126 aaPredicted RBP9.07□□□□□ -0.96
COLCA2-207ENST00000639470 ELOF1P60002 83 aaKnown RBP9.07□□□□□ -0.96
COLCA2-207ENST00000639470 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
COLCA2-207ENST00000639470 ASB16-AS1Q495Z4 193 aa9.07□□□□□ -0.96
COLCA2-207ENST00000639470 SCGB1D4Q6XE38 83 aa9.07□□□□□ -0.96
COLCA2-207ENST00000639470 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
COLCA2-207ENST00000639470 SLC25A20O43772 301 aa9.06□□□□□ -0.96
COLCA2-207ENST00000639470 Q1RN00 199 aa9.06□□□□□ -0.96
COLCA2-207ENST00000639470 KRTAP9-2Q9BYQ4 174 aa9.06□□□□□ -0.96
COLCA2-207ENST00000639470 SCGB1D1O95968 90 aa9.05□□□□□ -0.96
COLCA2-207ENST00000639470 MUSTN1Q8IVN3 82 aa9.04□□□□□ -0.96
COLCA2-207ENST00000639470 DHRS4-AS1Q9P1J3 65 aa9.04□□□□□ -0.96
COLCA2-207ENST00000639470 XP32Q5T750 250 aa9.03□□□□□ -0.96
COLCA2-207ENST00000639470 HSBP1L1C9JCN9 74 aa9.02□□□□□ -0.97
COLCA2-207ENST00000639470 A6NDN8 102 aa9.01□□□□□ -0.97
COLCA2-207ENST00000639470 H7C2G1 150 aa9.01□□□□□ -0.97
COLCA2-207ENST00000639470 LINC01547P58512 204 aaPredicted RBP9.01□□□□□ -0.97
COLCA2-207ENST00000639470 LINC00518Q8N0U6 118 aa9.01□□□□□ -0.97
COLCA2-207ENST00000639470 CBY1Q9Y3M2 126 aa9.01□□□□□ -0.97
COLCA2-207ENST00000639470 TAL2Q16559 108 aa9□□□□□ -0.97
COLCA2-207ENST00000639470 SMIM29Q86T20 159 aa9□□□□□ -0.97
COLCA2-207ENST00000639470 LAMTOR3Q9UHA4 124 aa8.99□□□□□ -0.97
COLCA2-207ENST00000639470 C9orf92A6NGG3 77 aa8.98□□□□□ -0.97
COLCA2-207ENST00000639470 SMIM11BQ8TCY0 68 aa8.97□□□□□ -0.97
COLCA2-207ENST00000639470 IFITM1P13164 125 aa8.96□□□□□ -0.98
COLCA2-207ENST00000639470 SEC61BP60468 96 aaKnown RBP8.96□□□□□ -0.98
COLCA2-207ENST00000639470 TEX49A0A1B0GTD5 131 aa8.95□□□□□ -0.98
COLCA2-207ENST00000639470 A0A1B0GWB2 263 aa8.94□□□□□ -0.98
COLCA2-207ENST00000639470 SLC25A34Q6PIV7 304 aa8.94□□□□□ -0.98
COLCA2-207ENST00000639470 TRBV7-6A0A0J9YX20 115 aa8.93□□□□□ -0.98
COLCA2-207ENST00000639470 PYY3Q5JQD4 70 aa8.93□□□□□ -0.98
COLCA2-207ENST00000639470 VAMP8Q9BV40 100 aa8.93□□□□□ -0.98
COLCA2-207ENST00000639470 IGLV5-48A0A075B6I7 105 aa8.92□□□□□ -0.98
COLCA2-207ENST00000639470 LIMD2Q9BT23 127 aa8.92□□□□□ -0.98
COLCA2-207ENST00000639470 SPATA45Q537H7 98 aa8.91□□□□□ -0.98
COLCA2-207ENST00000639470 Q6ZVH6 145 aa8.91□□□□□ -0.98
COLCA2-207ENST00000639470 PRO1933Q9H354 126 aa8.91□□□□□ -0.98
COLCA2-207ENST00000639470 PAM16Q9Y3D7 125 aa8.91□□□□□ -0.98
COLCA2-207ENST00000639470 COX8AP10176 69 aa8.9□□□□□ -0.98
COLCA2-207ENST00000639470 PCOTHQ58A44 107 aa8.9□□□□□ -0.98
COLCA2-207ENST00000639470 LCE2CQ5TA81 110 aa8.89□□□□□ -0.99
COLCA2-207ENST00000639470 TRAV13-2A0A0B4J235 113 aa8.88□□□□□ -0.99
COLCA2-207ENST00000639470 A4D1N5 150 aa8.88□□□□□ -0.99
COLCA2-207ENST00000639470 KRTAP19-2Q3LHN2 52 aa8.88□□□□□ -0.99
COLCA2-207ENST00000639470 C1orf195Q5TG92 126 aa8.88□□□□□ -0.99
COLCA2-207ENST00000639470 COPS9Q8WXC6 57 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms