RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 DSCR10P59022 87 aa3.47□□□□□ -1.85
TCF4-290ENST00000638154 Q8N1X5 172 aa3.47□□□□□ -1.85
TCF4-290ENST00000638154 COL27A1Q8IZC6 1860 aaPredicted RBP3.47□□□□□ -1.85
TCF4-290ENST00000638154 LINC01556Q5JQF7 62 aa3.45□□□□□ -1.86
TCF4-290ENST00000638154 ZNF575Q86XF7 245 aa3.45□□□□□ -1.86
TCF4-290ENST00000638154 A0A087X002 238 aa3.45□□□□□ -1.86
TCF4-290ENST00000638154 Q96NJ1 140 aa3.45□□□□□ -1.86
TCF4-290ENST00000638154 MAPK1IP1LQ8NDC0 245 aa3.44□□□□□ -1.86
TCF4-290ENST00000638154 SPACA4Q8TDM5 124 aa3.43□□□□□ -1.86
TCF4-290ENST00000638154 NOTCH2NLQ7Z3S9 236 aa3.43□□□□□ -1.86
TCF4-290ENST00000638154 CNBPP62633 177 aaKnown RBP3.42□□□□□ -1.86
TCF4-290ENST00000638154 IGLV1-40P01703 118 aa3.41□□□□□ -1.86
TCF4-290ENST00000638154 ZNF861PO60384 105 aa3.41□□□□□ -1.86
TCF4-290ENST00000638154 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
TCF4-290ENST00000638154 PSORS1C2Q9UIG4 136 aa3.41□□□□□ -1.86
TCF4-290ENST00000638154 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
TCF4-290ENST00000638154 ANKRD17O75179 2603 aaKnown RBP3.39□□□□□ -1.87
TCF4-290ENST00000638154 LINC00612Q8N6U2 182 aa3.39□□□□□ -1.87
TCF4-290ENST00000638154 ABCA12Q86UK0 2595 aa3.38□□□□□ -1.87
TCF4-290ENST00000638154 MUC22E2RYF6 1773 aaPredicted RBP3.38□□□□□ -1.87
TCF4-290ENST00000638154 KLK9Q2XQG4 91 aa3.38□□□□□ -1.87
TCF4-290ENST00000638154 ZCCHC13Q8WW36 166 aaKnown RBP3.38□□□□□ -1.87
TCF4-290ENST00000638154 ZFHX2Q9C0A1 2572 aaPredicted RBP3.38□□□□□ -1.87
TCF4-290ENST00000638154 H1FX-AS1Q4G0G2 97 aa3.38□□□□□ -1.87
TCF4-290ENST00000638154 C15orf56Q8N910 161 aa3.37□□□□□ -1.87
TCF4-290ENST00000638154 FAM168BA1KXE4 195 aa3.37□□□□□ -1.87
TCF4-290ENST00000638154 Q8NDZ9 215 aa3.37□□□□□ -1.87
TCF4-290ENST00000638154 FN1P02751 2386 aaKnown RBP3.37□□□□□ -1.87
TCF4-290ENST00000638154 PKD1L2Q7Z442 2459 aa3.37□□□□□ -1.87
TCF4-290ENST00000638154 SPRR4Q96PI1 79 aa3.37□□□□□ -1.87
TCF4-290ENST00000638154 GVQW2A0A096LPI5 108 aaPredicted RBP3.36□□□□□ -1.87
TCF4-290ENST00000638154 LTBP2Q14767 1821 aa3.36□□□□□ -1.87
TCF4-290ENST00000638154 HIVEP2P31629 2446 aa3.35□□□□□ -1.87
TCF4-290ENST00000638154 A0A096LNT2 108 aa3.35□□□□□ -1.87
TCF4-290ENST00000638154 KRTAP4-16G5E9R7 235 aaPredicted RBP3.35□□□□□ -1.87
TCF4-290ENST00000638154 DEFB123Q8N688 67 aa3.35□□□□□ -1.87
TCF4-290ENST00000638154 COL4A1P02462 1669 aa3.33□□□□□ -1.88
TCF4-290ENST00000638154 KRTAP11-1Q8IUC1 163 aa3.33□□□□□ -1.88
TCF4-290ENST00000638154 MMP24-AS1A0A0U1RRL7 71 aa3.33□□□□□ -1.88
TCF4-290ENST00000638154 PANO1I0J062 215 aa3.32□□□□□ -1.88
TCF4-290ENST00000638154 C9orf92A6NGG3 77 aa3.32□□□□□ -1.88
TCF4-290ENST00000638154 Q5W150 140 aa3.31□□□□□ -1.88
TCF4-290ENST00000638154 R4GN34 69 aa3.3□□□□□ -1.88
TCF4-290ENST00000638154 CCDC168Q8NDH2 2452 aa3.3□□□□□ -1.88
TCF4-290ENST00000638154 PTPN13Q12923 2485 aa3.29□□□□□ -1.88
TCF4-290ENST00000638154 ANKHD1Q8IWZ3 2542 aaKnown RBP3.29□□□□□ -1.88
TCF4-290ENST00000638154 NBDYA0A0U1RRE5 68 aa3.29□□□□□ -1.88
TCF4-290ENST00000638154 RIF1Q5UIP0 2472 aaKnown RBP3.29□□□□□ -1.88
TCF4-290ENST00000638154 HIVEP3Q5T1R4 2406 aa3.28□□□□□ -1.88
TCF4-290ENST00000638154 NCOR2Q9Y618 2525 aa3.28□□□□□ -1.88
TCF4-290ENST00000638154 DMBT1Q9UGM3 2413 aaPredicted RBP3.28□□□□□ -1.88
TCF4-290ENST00000638154 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
TCF4-290ENST00000638154 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.27□□□□□ -1.89
TCF4-290ENST00000638154 LCE6AA0A183 80 aa3.27□□□□□ -1.89
TCF4-290ENST00000638154 ACANP16112 2415 aa3.27□□□□□ -1.89
TCF4-290ENST00000638154 POLQO75417 2590 aa3.26□□□□□ -1.89
TCF4-290ENST00000638154 DOPEY1Q5JWR5 2465 aa3.26□□□□□ -1.89
TCF4-290ENST00000638154 PRR34Q9NV39 138 aa3.26□□□□□ -1.89
TCF4-290ENST00000638154 MYO9AB2RTY4 2548 aa3.25□□□□□ -1.89
TCF4-290ENST00000638154 PIEZO1Q92508 2521 aa3.25□□□□□ -1.89
TCF4-290ENST00000638154 IGF2RP11717 2491 aa3.25□□□□□ -1.89
TCF4-290ENST00000638154 WDR87Q6ZQQ6 2873 aa3.24□□□□□ -1.89
TCF4-290ENST00000638154 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
TCF4-290ENST00000638154 P0C880 135 aa3.23□□□□□ -1.89
TCF4-290ENST00000638154 K7EIL1 84 aa3.23□□□□□ -1.89
TCF4-290ENST00000638154 TLN2Q9Y4G6 2542 aa3.22□□□□□ -1.89
TCF4-290ENST00000638154 COL4A6Q14031 1691 aa3.22□□□□□ -1.89
TCF4-290ENST00000638154 KRTAP26-1Q6PEX3 210 aa3.22□□□□□ -1.89
TCF4-290ENST00000638154 NAV2Q8IVL1 2488 aa3.22□□□□□ -1.89
TCF4-290ENST00000638154 LRRK2Q5S007 2527 aa3.22□□□□□ -1.89
TCF4-290ENST00000638154 ANAPC11Q9NYG5 84 aa3.21□□□□□ -1.89
TCF4-290ENST00000638154 A0A087WTM6 91 aa3.21□□□□□ -1.9
TCF4-290ENST00000638154 LINC00472Q9H8W2 130 aa3.21□□□□□ -1.9
TCF4-290ENST00000638154 U3KQA8 63 aa3.21□□□□□ -1.9
TCF4-290ENST00000638154 KRTAP29-1A8MX34 341 aaPredicted RBP3.2□□□□□ -1.9
TCF4-290ENST00000638154 GIG44P09565 113 aaPredicted RBP3.2□□□□□ -1.9
TCF4-290ENST00000638154 ACACBO00763 2458 aa3.19□□□□□ -1.9
TCF4-290ENST00000638154 COX6B2Q6YFQ2 88 aa3.19□□□□□ -1.9
TCF4-290ENST00000638154 S4R3F8 94 aa3.19□□□□□ -1.9
TCF4-290ENST00000638154 JMJD1CQ15652 2540 aa3.18□□□□□ -1.9
TCF4-290ENST00000638154 CACNA1AO00555 2505 aa3.18□□□□□ -1.9
TCF4-290ENST00000638154 TLN1Q9Y490 2541 aaKnown RBP3.17□□□□□ -1.9
TCF4-290ENST00000638154 KRTAP23-1A1A580 65 aa3.16□□□□□ -1.9
TCF4-290ENST00000638154 COL4A2P08572 1712 aa3.14□□□□□ -1.91
TCF4-290ENST00000638154 PLAC8Q9NZF1 115 aa3.14□□□□□ -1.91
TCF4-290ENST00000638154 A0A1W2PPR1 153 aa3.13□□□□□ -1.91
TCF4-290ENST00000638154 COL4A4P53420 1690 aaPredicted RBP3.13□□□□□ -1.91
TCF4-290ENST00000638154 M0QZ58 72 aa3.11□□□□□ -1.91
TCF4-290ENST00000638154 H0YAA0 97 aa3.11□□□□□ -1.91
TCF4-290ENST00000638154 H3BNG1 76 aa3.1□□□□□ -1.91
TCF4-290ENST00000638154 SRCAPQ6ZRS2 3230 aa3.1□□□□□ -1.91
TCF4-290ENST00000638154 Q6ZSA8 131 aa3.09□□□□□ -1.91
TCF4-290ENST00000638154 NOTCH2Q04721 2471 aa3.09□□□□□ -1.92
TCF4-290ENST00000638154 SPTBN4Q9H254 2564 aa3.08□□□□□ -1.92
TCF4-290ENST00000638154 PCNTO95613 3336 aa3.08□□□□□ -1.92
TCF4-290ENST00000638154 BPTFQ12830 3046 aa3.07□□□□□ -1.92
TCF4-290ENST00000638154 KRTAP10-8P60410 259 aa3.07□□□□□ -1.92
TCF4-290ENST00000638154 ZFYVE26Q68DK2 2539 aa3.07□□□□□ -1.92
TCF4-290ENST00000638154 MUC6Q6W4X9 2439 aa3.06□□□□□ -1.92
TCF4-290ENST00000638154 SPRR1BP22528 89 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms