RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 IGFL1Q6UW32 110 aa11.25□□□□□ -0.61
CACNA1A-253ENST00000637927 LOC101927531A0A1B0GV80 90 aa11.24□□□□□ -0.61
CACNA1A-253ENST00000637927 LINC01546A6NGU7 62 aa11.24□□□□□ -0.61
CACNA1A-253ENST00000637927 LINC00528Q8N1L1 170 aa11.23□□□□□ -0.61
CACNA1A-253ENST00000637927 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.61
CACNA1A-253ENST00000637927 GVQW2A0A096LPI5 108 aaPredicted RBP11.21□□□□□ -0.62
CACNA1A-253ENST00000637927 H3BNG1 76 aa11.2□□□□□ -0.62
CACNA1A-253ENST00000637927 K7EIL1 84 aa11.2□□□□□ -0.62
CACNA1A-253ENST00000637927 KRTAP10-3P60369 221 aa11.18□□□□□ -0.62
CACNA1A-253ENST00000637927 PRR26Q8N8Z3 221 aa11.16□□□□□ -0.62
CACNA1A-253ENST00000637927 PRR15Q8IV56 129 aa11.16□□□□□ -0.62
CACNA1A-253ENST00000637927 LINC00483Q53H64 154 aa11.15□□□□□ -0.62
CACNA1A-253ENST00000637927 CASC10Q5T4H9 136 aa11.15□□□□□ -0.63
CACNA1A-253ENST00000637927 A0A1B0GVX0 72 aa11.13□□□□□ -0.63
CACNA1A-253ENST00000637927 ZNF861PO60384 105 aa11.12□□□□□ -0.63
CACNA1A-253ENST00000637927 LOC110117498A0A087WWA1 95 aa11.12□□□□□ -0.63
CACNA1A-253ENST00000637927 A0A087WTM6 91 aa11.12□□□□□ -0.63
CACNA1A-253ENST00000637927 USP9XQ93008 2570 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-253ENST00000637927 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
CACNA1A-253ENST00000637927 PKD1L2Q7Z442 2459 aa11.08□□□□□ -0.64
CACNA1A-253ENST00000637927 FAM104AQ969W3 186 aa11.07□□□□□ -0.64
CACNA1A-253ENST00000637927 Q5VSD8 79 aa11.07□□□□□ -0.64
CACNA1A-253ENST00000637927 CHD8Q9HCK8 2581 aa11.06□□□□□ -0.64
CACNA1A-253ENST00000637927 IGLV7-43P04211 117 aa11.06□□□□□ -0.64
CACNA1A-253ENST00000637927 DNAH12Q6ZR08 3092 aa11.06□□□□□ -0.64
CACNA1A-253ENST00000637927 H3BPC8 53 aa11.05□□□□□ -0.64
CACNA1A-253ENST00000637927 IGLV7-46A0A075B6I9 117 aa11.05□□□□□ -0.64
CACNA1A-253ENST00000637927 PRO0461Q9UI25 63 aa11.04□□□□□ -0.64
CACNA1A-253ENST00000637927 CD164Q04900 197 aa11.04□□□□□ -0.64
CACNA1A-253ENST00000637927 EIF4EBP3O60516 100 aaPredicted RBP11.02□□□□□ -0.64
CACNA1A-253ENST00000637927 ACANP16112 2415 aa11.02□□□□□ -0.65
CACNA1A-253ENST00000637927 ERC2-IT1O76042 136 aa11.02□□□□□ -0.65
CACNA1A-253ENST00000637927 LITAFQ99732 161 aa11.02□□□□□ -0.65
CACNA1A-253ENST00000637927 Q8N377 158 aa11□□□□□ -0.65
CACNA1A-253ENST00000637927 RPS28P62857 69 aaKnown RBP10.96□□□□□ -0.65
CACNA1A-253ENST00000637927 TNP2Q05952 138 aa10.96□□□□□ -0.66
CACNA1A-253ENST00000637927 KCNQ1DNQ9H478 68 aa10.94□□□□□ -0.66
CACNA1A-253ENST00000637927 POLQO75417 2590 aa10.94□□□□□ -0.66
CACNA1A-253ENST00000637927 LINC00612Q8N6U2 182 aa10.93□□□□□ -0.66
CACNA1A-253ENST00000637927 C9orf163Q8N9P6 203 aa10.93□□□□□ -0.66
CACNA1A-253ENST00000637927 SPTBN4Q9H254 2564 aa10.93□□□□□ -0.66
CACNA1A-253ENST00000637927 USP9YO00507 2555 aaPredicted RBP10.92□□□□□ -0.66
CACNA1A-253ENST00000637927 ANKRD11Q6UB99 2663 aaPredicted RBP10.92□□□□□ -0.66
CACNA1A-253ENST00000637927 MTORP42345 2549 aa10.92□□□□□ -0.66
CACNA1A-253ENST00000637927 C19orf73Q9NVV2 129 aa10.91□□□□□ -0.66
CACNA1A-253ENST00000637927 S4R3F8 94 aa10.91□□□□□ -0.66
CACNA1A-253ENST00000637927 C5orf42Q9H799 3197 aa10.9□□□□□ -0.66
CACNA1A-253ENST00000637927 A0A1B0GW54 56 aa10.89□□□□□ -0.67
CACNA1A-253ENST00000637927 FASNP49327 2511 aaKnown RBP10.88□□□□□ -0.67
CACNA1A-253ENST00000637927 GIG44P09565 113 aaPredicted RBP10.87□□□□□ -0.67
CACNA1A-253ENST00000637927 CEP295Q9C0D2 2601 aa10.86□□□□□ -0.67
CACNA1A-253ENST00000637927 ANKRD17O75179 2603 aaKnown RBP10.86□□□□□ -0.67
CACNA1A-253ENST00000637927 CYP4F30PQ9H0H9 118 aa10.86□□□□□ -0.67
CACNA1A-253ENST00000637927 Q1T7F1 81 aa10.85□□□□□ -0.67
CACNA1A-253ENST00000637927 CR1P17927 2039 aa10.85□□□□□ -0.67
CACNA1A-253ENST00000637927 KTN1-AS1Q86SY8 53 aa10.85□□□□□ -0.67
CACNA1A-253ENST00000637927 LCA10Q71F78 164 aa10.83□□□□□ -0.68
CACNA1A-253ENST00000637927 SPRR4Q96PI1 79 aa10.83□□□□□ -0.68
CACNA1A-253ENST00000637927 H1FX-AS1Q4G0G2 97 aa10.83□□□□□ -0.68
CACNA1A-253ENST00000637927 PLAC4Q8WY50 150 aa10.82□□□□□ -0.68
CACNA1A-253ENST00000637927 PRAC1Q96KF2 57 aa10.81□□□□□ -0.68
CACNA1A-253ENST00000637927 SPINK7P58062 85 aa10.81□□□□□ -0.68
CACNA1A-253ENST00000637927 A0A1B0GU33 70 aa10.8□□□□□ -0.68
CACNA1A-253ENST00000637927 PRR34Q9NV39 138 aa10.78□□□□□ -0.68
CACNA1A-253ENST00000637927 PCNTO95613 3336 aa10.77□□□□□ -0.68
CACNA1A-253ENST00000637927 R4GN34 69 aa10.75□□□□□ -0.69
CACNA1A-253ENST00000637927 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-253ENST00000637927 A0A096LNT2 108 aa10.73□□□□□ -0.69
CACNA1A-253ENST00000637927 HRES1P13985 223 aa10.69□□□□□ -0.7
CACNA1A-253ENST00000637927 KRTAP1-3Q8IUG1 177 aa10.67□□□□□ -0.7
CACNA1A-253ENST00000637927 H3BS24 57 aa10.67□□□□□ -0.7
CACNA1A-253ENST00000637927 A0A1W2PNM2 257 aa10.66□□□□□ -0.7
CACNA1A-253ENST00000637927 USP24Q9UPU5 2620 aa10.66□□□□□ -0.7
CACNA1A-253ENST00000637927 CSAG1Q6PB30 78 aa10.65□□□□□ -0.7
CACNA1A-253ENST00000637927 H7BZZ5 65 aa10.62□□□□□ -0.71
CACNA1A-253ENST00000637927 M0QZ58 72 aa10.61□□□□□ -0.71
CACNA1A-253ENST00000637927 Q8N9P0 234 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-253ENST00000637927 A0A0A0MQY5 61 aa10.59□□□□□ -0.71
CACNA1A-253ENST00000637927 KLK9Q2XQG4 91 aa10.58□□□□□ -0.72
CACNA1A-253ENST00000637927 CNBPP62633 177 aaKnown RBP10.58□□□□□ -0.72
CACNA1A-253ENST00000637927 BPTFQ12830 3046 aa10.57□□□□□ -0.72
CACNA1A-253ENST00000637927 KRTAP1-1Q07627 177 aa10.57□□□□□ -0.72
CACNA1A-253ENST00000637927 FAM229BQ4G0N7 80 aa10.57□□□□□ -0.72
CACNA1A-253ENST00000637927 CEP350Q5VT06 3117 aa10.55□□□□□ -0.72
CACNA1A-253ENST00000637927 MGAM2Q2M2H8 2515 aa10.51□□□□□ -0.73
CACNA1A-253ENST00000637927 KLKP1Q107X0 134 aa10.5□□□□□ -0.73
CACNA1A-253ENST00000637927 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
CACNA1A-253ENST00000637927 SPATA8Q6RVD6 105 aa10.5□□□□□ -0.73
CACNA1A-253ENST00000637927 ZCCHC13Q8WW36 166 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-253ENST00000637927 DMAC1Q96GE9 116 aa10.45□□□□□ -0.74
CACNA1A-253ENST00000637927 MKI67P46013 3256 aaKnown RBP10.44□□□□□ -0.74
CACNA1A-253ENST00000637927 C20orf166-AS1Q96NR2 134 aa10.43□□□□□ -0.74
CACNA1A-253ENST00000637927 FLNBO75369 2602 aaKnown RBP10.43□□□□□ -0.74
CACNA1A-253ENST00000637927 XIRP2A4UGR9 3374 aa10.41□□□□□ -0.74
CACNA1A-253ENST00000637927 FP248Q71RG6 208 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-253ENST00000637927 SEC61BP60468 96 aaKnown RBP10.38□□□□□ -0.75
CACNA1A-253ENST00000637927 HECTD1Q9ULT8 2610 aa10.37□□□□□ -0.75
CACNA1A-253ENST00000637927 EPG5Q9HCE0 2579 aa10.35□□□□□ -0.75
CACNA1A-253ENST00000637927 SPANXA2-OT1Q8N9U9 137 aa10.35□□□□□ -0.75
CACNA1A-253ENST00000637927 ATRQ13535 2644 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms