RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
CLN6-221ENST00000637494 LINC00483Q53H64 154 aa10.89□□□□□ -0.67
CLN6-221ENST00000637494 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
CLN6-221ENST00000637494 SPINK1P00995 79 aa10.87□□□□□ -0.67
CLN6-221ENST00000637494 LINC01545Q5VT33 79 aa10.87□□□□□ -0.67
CLN6-221ENST00000637494 IGLV9-49A0A0B4J1Y8 123 aa10.86□□□□□ -0.67
CLN6-221ENST00000637494 ZNF73O43830 326 aaPredicted RBP10.86□□□□□ -0.67
CLN6-221ENST00000637494 SOSTDC1Q6X4U4 206 aa10.86□□□□□ -0.67
CLN6-221ENST00000637494 FP248Q71RG6 208 aaPredicted RBP10.86□□□□□ -0.67
CLN6-221ENST00000637494 Q9BRP9 147 aa10.86□□□□□ -0.67
CLN6-221ENST00000637494 TIMM17BO60830 172 aa10.85□□□□□ -0.67
CLN6-221ENST00000637494 ERC2-IT1O76042 136 aa10.85□□□□□ -0.67
CLN6-221ENST00000637494 SPANXCQ9NY87 97 aa10.85□□□□□ -0.67
CLN6-221ENST00000637494 ZNF815PA8K554 130 aa10.84□□□□□ -0.67
CLN6-221ENST00000637494 MOBPQ13875 183 aa10.84□□□□□ -0.67
CLN6-221ENST00000637494 SSBP3-AS1Q7Z2R9 100 aa10.84□□□□□ -0.67
CLN6-221ENST00000637494 OR13C6PQ8NH95 151 aa10.84□□□□□ -0.67
CLN6-221ENST00000637494 LINC00308Q8TCZ7 52 aa10.83□□□□□ -0.68
CLN6-221ENST00000637494 C20orf202A1L168 122 aa10.81□□□□□ -0.68
CLN6-221ENST00000637494 EIF4EBP3O60516 100 aaPredicted RBP10.81□□□□□ -0.68
CLN6-221ENST00000637494 C3orf79P0CE67 100 aa10.8□□□□□ -0.68
CLN6-221ENST00000637494 KRTDAPP60985 99 aa10.8□□□□□ -0.68
CLN6-221ENST00000637494 C5orf52A6NGY3 159 aa10.79□□□□□ -0.68
CLN6-221ENST00000637494 C9orf153Q5TBE3 101 aa10.79□□□□□ -0.68
CLN6-221ENST00000637494 LINC00518Q8N0U6 118 aa10.79□□□□□ -0.68
CLN6-221ENST00000637494 LITAFQ99732 161 aa10.79□□□□□ -0.68
CLN6-221ENST00000637494 RPS29P62273 56 aaKnown RBP10.78□□□□□ -0.68
CLN6-221ENST00000637494 SPANXDQ9BXN6 97 aa10.78□□□□□ -0.68
CLN6-221ENST00000637494 SCGB1D4Q6XE38 83 aa10.77□□□□□ -0.69
CLN6-221ENST00000637494 COPS9Q8WXC6 57 aa10.77□□□□□ -0.69
CLN6-221ENST00000637494 COA6Q5JTJ3 125 aaKnown RBP10.76□□□□□ -0.69
CLN6-221ENST00000637494 DHRS4-AS1Q9P1J3 65 aa10.76□□□□□ -0.69
CLN6-221ENST00000637494 AKR1D1P51857 326 aa10.75□□□□□ -0.69
CLN6-221ENST00000637494 SLC25A34Q6PIV7 304 aa10.75□□□□□ -0.69
CLN6-221ENST00000637494 TTTY13Q9BZ97 58 aa10.74□□□□□ -0.69
CLN6-221ENST00000637494 SLC25A20O43772 301 aa10.73□□□□□ -0.69
CLN6-221ENST00000637494 ST20-AS1Q8NBB2 130 aa10.73□□□□□ -0.69
CLN6-221ENST00000637494 COX7BP24311 80 aa10.71□□□□□ -0.69
CLN6-221ENST00000637494 Q8N377 158 aa10.7□□□□□ -0.7
CLN6-221ENST00000637494 IFITM1P13164 125 aa10.69□□□□□ -0.7
CLN6-221ENST00000637494 KRTAP13-3Q3SY46 172 aa10.69□□□□□ -0.7
CLN6-221ENST00000637494 LAMTOR3Q9UHA4 124 aa10.69□□□□□ -0.7
CLN6-221ENST00000637494 ELOF1P60002 83 aaKnown RBP10.68□□□□□ -0.7
CLN6-221ENST00000637494 C6orf99Q4VX62 202 aa10.68□□□□□ -0.7
CLN6-221ENST00000637494 Q6ZVH6 145 aa10.68□□□□□ -0.7
CLN6-221ENST00000637494 SPRR1BP22528 89 aa10.67□□□□□ -0.7
CLN6-221ENST00000637494 ATOH7Q8N100 152 aa10.67□□□□□ -0.7
CLN6-221ENST00000637494 TAL2Q16559 108 aa10.66□□□□□ -0.7
CLN6-221ENST00000637494 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
CLN6-221ENST00000637494 MUC2Q02817 5179 aa10.66□□□□□ -0.7
CLN6-221ENST00000637494 A6NDN8 102 aa10.65□□□□□ -0.7
CLN6-221ENST00000637494 SNRPEP62304 92 aaKnown RBP10.65□□□□□ -0.7
CLN6-221ENST00000637494 TRBV7-6A0A0J9YX20 115 aa10.64□□□□□ -0.71
CLN6-221ENST00000637494 LIMD2Q9BT23 127 aa10.64□□□□□ -0.71
CLN6-221ENST00000637494 DEFB105AQ8NG35 78 aa10.62□□□□□ -0.71
CLN6-221ENST00000637494 A0A1B0GWB2 263 aa10.61□□□□□ -0.71
CLN6-221ENST00000637494 S100A2P29034 98 aa10.61□□□□□ -0.71
CLN6-221ENST00000637494 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
CLN6-221ENST00000637494 MUSTN1Q8IVN3 82 aa10.61□□□□□ -0.71
CLN6-221ENST00000637494 TEX49A0A1B0GTD5 131 aa10.6□□□□□ -0.71
CLN6-221ENST00000637494 PCP2Q8IVA1 136 aa10.6□□□□□ -0.71
CLN6-221ENST00000637494 TRAV13-2A0A0B4J235 113 aa10.59□□□□□ -0.71
CLN6-221ENST00000637494 ASB16-AS1Q495Z4 193 aa10.59□□□□□ -0.71
CLN6-221ENST00000637494 HRCT1Q6UXD1 115 aa10.59□□□□□ -0.71
CLN6-221ENST00000637494 A4D1N5 150 aa10.58□□□□□ -0.72
CLN6-221ENST00000637494 HSBP1L1C9JCN9 74 aa10.58□□□□□ -0.72
CLN6-221ENST00000637494 Q1RN00 199 aa10.57□□□□□ -0.72
CLN6-221ENST00000637494 PRO1933Q9H354 126 aa10.57□□□□□ -0.72
CLN6-221ENST00000637494 NHP2Q9NX24 153 aaKnown RBP10.57□□□□□ -0.72
CLN6-221ENST00000637494 CD164Q04900 197 aa10.54□□□□□ -0.72
CLN6-221ENST00000637494 MUC17Q685J3 4493 aa10.54□□□□□ -0.72
CLN6-221ENST00000637494 H7C2G1 150 aa10.53□□□□□ -0.72
CLN6-221ENST00000637494 S100A6P06703 90 aa10.53□□□□□ -0.72
CLN6-221ENST00000637494 HIST3H2BBQ8N257 126 aa10.53□□□□□ -0.72
CLN6-221ENST00000637494 S100A1P23297 94 aa10.52□□□□□ -0.73
CLN6-221ENST00000637494 VAMP3Q15836 100 aa10.52□□□□□ -0.73
CLN6-221ENST00000637494 HIST1H2BLQ99880 126 aa10.52□□□□□ -0.73
CLN6-221ENST00000637494 XP32Q5T750 250 aa10.5□□□□□ -0.73
CLN6-221ENST00000637494 LCE2AQ5TA79 106 aaPredicted RBP10.5□□□□□ -0.73
CLN6-221ENST00000637494 SMIM11BQ8TCY0 68 aa10.5□□□□□ -0.73
CLN6-221ENST00000637494 IGLV5-48A0A075B6I7 105 aa10.49□□□□□ -0.73
CLN6-221ENST00000637494 SMIM29Q86T20 159 aa10.46□□□□□ -0.73
CLN6-221ENST00000637494 F8WEM9 126 aa10.45□□□□□ -0.74
CLN6-221ENST00000637494 LINC01547P58512 204 aaPredicted RBP10.45□□□□□ -0.74
CLN6-221ENST00000637494 FAT4Q6V0I7 4981 aa10.43□□□□□ -0.74
CLN6-221ENST00000637494 SCGB1D1O95968 90 aa10.42□□□□□ -0.74
CLN6-221ENST00000637494 Q5XG85 94 aa10.42□□□□□ -0.74
CLN6-221ENST00000637494 C9orf92A6NGG3 77 aa10.41□□□□□ -0.74
CLN6-221ENST00000637494 hADV29S1A0JD25 119 aa10.4□□□□□ -0.74
CLN6-221ENST00000637494 LINC00575Q6W349 94 aa10.4□□□□□ -0.74
CLN6-221ENST00000637494 HIST1H4GQ99525 98 aa10.4□□□□□ -0.74
CLN6-221ENST00000637494 TCL1BO95988 128 aa10.39□□□□□ -0.75
CLN6-221ENST00000637494 KRTAP4-1Q9BYQ7 146 aa10.37□□□□□ -0.75
CLN6-221ENST00000637494 BVES-AS1Q5T3Y7 98 aa10.36□□□□□ -0.75
CLN6-221ENST00000637494 Q6ZQY7 126 aa10.36□□□□□ -0.75
CLN6-221ENST00000637494 A0A0G2JQZ4 141 aa10.35□□□□□ -0.75
CLN6-221ENST00000637494 C1orf195Q5TG92 126 aa10.35□□□□□ -0.75
CLN6-221ENST00000637494 COX8AP10176 69 aa10.34□□□□□ -0.75
CLN6-221ENST00000637494 C12orf57Q99622 126 aa10.34□□□□□ -0.75
CLN6-221ENST00000637494 KRTAP9-2Q9BYQ4 174 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms