RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 KRTAP4-16G5E9R7 235 aaPredicted RBP12.32□□□□□ -0.44
SF1-221ENST00000633899 OR13C6PQ8NH95 151 aa12.32□□□□□ -0.44
SF1-221ENST00000633899 COPS9Q8WXC6 57 aa12.32□□□□□ -0.44
SF1-221ENST00000633899 B5MCH6 92 aa12.3□□□□□ -0.44
SF1-221ENST00000633899 PCP2Q8IVA1 136 aa12.3□□□□□ -0.44
SF1-221ENST00000633899 SMCR5Q8TEV8 140 aa12.3□□□□□ -0.44
SF1-221ENST00000633899 SPRR4Q96PI1 79 aa12.3□□□□□ -0.44
SF1-221ENST00000633899 SPANXDQ9BXN6 97 aa12.3□□□□□ -0.44
SF1-221ENST00000633899 KRTAP13-2Q52LG2 175 aa12.29□□□□□ -0.44
SF1-221ENST00000633899 ZNF73O43830 326 aaPredicted RBP12.27□□□□□ -0.45
SF1-221ENST00000633899 HINT1P49773 126 aaPredicted RBP12.27□□□□□ -0.45
SF1-221ENST00000633899 JOSD1Q15040 202 aaPredicted RBP12.27□□□□□ -0.45
SF1-221ENST00000633899 Q6ZRX8 168 aa12.27□□□□□ -0.45
SF1-221ENST00000633899 LINC00518Q8N0U6 118 aa12.27□□□□□ -0.45
SF1-221ENST00000633899 TSPAN13O95857 204 aa12.26□□□□□ -0.45
SF1-221ENST00000633899 Q6ZVH6 145 aa12.26□□□□□ -0.45
SF1-221ENST00000633899 SCGB1D1O95968 90 aa12.25□□□□□ -0.45
SF1-221ENST00000633899 IFITM1P13164 125 aa12.25□□□□□ -0.45
SF1-221ENST00000633899 C5orf52A6NGY3 159 aa12.24□□□□□ -0.45
SF1-221ENST00000633899 LINC00304Q8N9R0 145 aa12.23□□□□□ -0.45
SF1-221ENST00000633899 PPDPFQ9H3Y8 114 aa12.23□□□□□ -0.45
SF1-221ENST00000633899 Q9BRP9 147 aa12.22□□□□□ -0.45
SF1-221ENST00000633899 GAGE2AQ6NT46 116 aa12.21□□□□□ -0.45
SF1-221ENST00000633899 C3orf22Q8N5N4 141 aa12.21□□□□□ -0.45
SF1-221ENST00000633899 MUSTN1Q8IVN3 82 aa12.2□□□□□ -0.46
SF1-221ENST00000633899 ERC2-IT1O76042 136 aa12.19□□□□□ -0.46
SF1-221ENST00000633899 PRR4Q16378 134 aa12.19□□□□□ -0.46
SF1-221ENST00000633899 A6NDN8 102 aa12.16□□□□□ -0.46
SF1-221ENST00000633899 LINC00483Q53H64 154 aa12.16□□□□□ -0.46
SF1-221ENST00000633899 LRP2P98164 4655 aa12.14□□□□□ -0.47
SF1-221ENST00000633899 C6orf99Q4VX62 202 aa12.14□□□□□ -0.47
SF1-221ENST00000633899 C4orf48Q5BLP8 95 aa12.13□□□□□ -0.47
SF1-221ENST00000633899 COX7BP24311 80 aa12.12□□□□□ -0.47
SF1-221ENST00000633899 SPAG11AQ6PDA7 123 aa12.12□□□□□ -0.47
SF1-221ENST00000633899 DHRS4-AS1Q9P1J3 65 aa12.12□□□□□ -0.47
SF1-221ENST00000633899 IGLV9-49A0A0B4J1Y8 123 aa12.11□□□□□ -0.47
SF1-221ENST00000633899 TRAV13-2A0A0B4J235 113 aa12.11□□□□□ -0.47
SF1-221ENST00000633899 UBR4Q5T4S7 5183 aa12.1□□□□□ -0.47
SF1-221ENST00000633899 ELOF1P60002 83 aaKnown RBP12.1□□□□□ -0.47
SF1-221ENST00000633899 Q8NBF4 154 aa12.1□□□□□ -0.47
SF1-221ENST00000633899 CTAG1AP78358 180 aa12.09□□□□□ -0.47
SF1-221ENST00000633899 COX8AP10176 69 aa12.08□□□□□ -0.48
SF1-221ENST00000633899 MOBPQ13875 183 aa12.08□□□□□ -0.48
SF1-221ENST00000633899 ST20-AS1Q8NBB2 130 aa12.08□□□□□ -0.48
SF1-221ENST00000633899 TRBV7-6A0A0J9YX20 115 aa12.06□□□□□ -0.48
SF1-221ENST00000633899 A0A1B0GWB2 263 aa12.05□□□□□ -0.48
SF1-221ENST00000633899 C9orf153Q5TBE3 101 aa12.05□□□□□ -0.48
SF1-221ENST00000633899 HIST1H4GQ99525 98 aa12.05□□□□□ -0.48
SF1-221ENST00000633899 RETNLBQ9BQ08 111 aa12.05□□□□□ -0.48
SF1-221ENST00000633899 VAMP8Q9BV40 100 aa12.05□□□□□ -0.48
SF1-221ENST00000633899 PAM16Q9Y3D7 125 aa12.05□□□□□ -0.48
SF1-221ENST00000633899 A4D1N5 150 aa12.04□□□□□ -0.48
SF1-221ENST00000633899 SPATA45Q537H7 98 aa12.04□□□□□ -0.48
SF1-221ENST00000633899 SLC25A34Q6PIV7 304 aa12.03□□□□□ -0.48
SF1-221ENST00000633899 SSBP3-AS1Q7Z2R9 100 aa12.03□□□□□ -0.48
SF1-221ENST00000633899 LPAP08519 4548 aa12.03□□□□□ -0.48
SF1-221ENST00000633899 DLEU1O43261 78 aa12.02□□□□□ -0.49
SF1-221ENST00000633899 SMIM11BQ8TCY0 68 aa12.01□□□□□ -0.49
SF1-221ENST00000633899 C14orf144Q96I85 54 aa12.01□□□□□ -0.49
SF1-221ENST00000633899 TAL2Q16559 108 aa12□□□□□ -0.49
SF1-221ENST00000633899 SPINK1P00995 79 aa11.99□□□□□ -0.49
SF1-221ENST00000633899 SPRR1BP22528 89 aa11.98□□□□□ -0.49
SF1-221ENST00000633899 VAMP3Q15836 100 aa11.98□□□□□ -0.49
SF1-221ENST00000633899 DEFB105AQ8NG35 78 aa11.98□□□□□ -0.49
SF1-221ENST00000633899 NHP2Q9NX24 153 aaKnown RBP11.98□□□□□ -0.49
SF1-221ENST00000633899 LAMTOR3Q9UHA4 124 aa11.98□□□□□ -0.49
SF1-221ENST00000633899 C12orf57Q99622 126 aa11.97□□□□□ -0.49
SF1-221ENST00000633899 TMA7Q9Y2S6 64 aaKnown RBP11.97□□□□□ -0.49
SF1-221ENST00000633899 SLC25A20O43772 301 aa11.95□□□□□ -0.5
SF1-221ENST00000633899 TEX49A0A1B0GTD5 131 aa11.94□□□□□ -0.5
SF1-221ENST00000633899 HIGD1BQ9P298 99 aa11.94□□□□□ -0.5
SF1-221ENST00000633899 IGLV7-46A0A075B6I9 117 aa11.93□□□□□ -0.5
SF1-221ENST00000633899 Q1RN00 199 aa11.91□□□□□ -0.5
SF1-221ENST00000633899 RPS29P62273 56 aaKnown RBP11.9□□□□□ -0.5
SF1-221ENST00000633899 RAB37Q96AX2 223 aa11.89□□□□□ -0.51
SF1-221ENST00000633899 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
SF1-221ENST00000633899 PYY3Q5JQD4 70 aa11.87□□□□□ -0.51
SF1-221ENST00000633899 C2orf91Q6ZV80 131 aa11.87□□□□□ -0.51
SF1-221ENST00000633899 IGLV5-48A0A075B6I7 105 aa11.86□□□□□ -0.51
SF1-221ENST00000633899 H7C2G1 150 aa11.86□□□□□ -0.51
SF1-221ENST00000633899 BVES-AS1Q5T3Y7 98 aa11.86□□□□□ -0.51
SF1-221ENST00000633899 TPRXLQ17RH7 258 aa11.85□□□□□ -0.51
SF1-221ENST00000633899 LINC00575Q6W349 94 aa11.85□□□□□ -0.51
SF1-221ENST00000633899 CDIP1Q9H305 208 aa11.85□□□□□ -0.51
SF1-221ENST00000633899 hADV29S1A0JD25 119 aa11.84□□□□□ -0.51
SF1-221ENST00000633899 CFC1BP0CG36 223 aa11.83□□□□□ -0.52
SF1-221ENST00000633899 CFC1P0CG37 223 aa11.83□□□□□ -0.52
SF1-221ENST00000633899 LINC01547P58512 204 aaPredicted RBP11.83□□□□□ -0.52
SF1-221ENST00000633899 HRCT1Q6UXD1 115 aa11.83□□□□□ -0.52
SF1-221ENST00000633899 CEND1Q8N111 149 aa11.83□□□□□ -0.52
SF1-221ENST00000633899 Q8N377 158 aa11.83□□□□□ -0.52
SF1-221ENST00000633899 PRO1933Q9H354 126 aa11.83□□□□□ -0.52
SF1-221ENST00000633899 A0A0B4J2C4 111 aa11.82□□□□□ -0.52
SF1-221ENST00000633899 TMEM238LA0A1B0GVL6 79 aa11.82□□□□□ -0.52
SF1-221ENST00000633899 A6NJY4 79 aa11.82□□□□□ -0.52
SF1-221ENST00000633899 SMIM29Q86T20 159 aa11.81□□□□□ -0.52
SF1-221ENST00000633899 LIMD2Q9BT23 127 aa11.81□□□□□ -0.52
SF1-221ENST00000633899 Q6ZQY7 126 aa11.8□□□□□ -0.52
SF1-221ENST00000633899 F8WEM9 126 aa11.79□□□□□ -0.52
SF1-221ENST00000633899 RNF213Q63HN8 5207 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms