RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 PSCAO43653 123 aa3.57□□□□□ -1.84
NEK3-211ENST00000629912 PDE6GP18545 87 aa3.57□□□□□ -1.84
NEK3-211ENST00000629912 GAGE2BQ13066 116 aa3.57□□□□□ -1.84
NEK3-211ENST00000629912 IMUPQ9GZP8 106 aa3.57□□□□□ -1.84
NEK3-211ENST00000629912 PKIGQ9Y2B9 76 aa3.57□□□□□ -1.84
NEK3-211ENST00000629912 PRKDCP78527 4128 aaKnown RBP3.57□□□□□ -1.84
NEK3-211ENST00000629912 CSMD3Q7Z407 3707 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 LOC110117498A0A087WWA1 95 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 TRBV7-7A0A0K0K1E9 115 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 B5MCH6 92 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 RBM3P98179 157 aaKnown RBP3.56□□□□□ -1.84
NEK3-211ENST00000629912 C21orf62-AS1Q17RA5 79 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
NEK3-211ENST00000629912 GAGE2AQ6NT46 116 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 Q6ZQY7 126 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 Q6ZRN7 208 aaPredicted RBP3.56□□□□□ -1.84
NEK3-211ENST00000629912 C9orf163Q8N9P6 203 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 C14orf132Q9NPU4 83 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 DHRS4-AS1Q9P1J3 65 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 DNHD1Q96M86 4753 aa3.56□□□□□ -1.84
NEK3-211ENST00000629912 DNAH17Q9UFH2 4485 aa3.55□□□□□ -1.84
NEK3-211ENST00000629912 STARD9Q9P2P6 4700 aa3.55□□□□□ -1.84
NEK3-211ENST00000629912 FAM168BA1KXE4 195 aa3.55□□□□□ -1.84
NEK3-211ENST00000629912 MRPL55Q7Z7F7 128 aaKnown RBP3.55□□□□□ -1.84
NEK3-211ENST00000629912 SMCR5Q8TEV8 140 aa3.55□□□□□ -1.84
NEK3-211ENST00000629912 DNAH2Q9P225 4427 aa3.55□□□□□ -1.84
NEK3-211ENST00000629912 DNAH6Q9C0G6 4158 aa3.55□□□□□ -1.84
NEK3-211ENST00000629912 A0A096LNI7 61 aa3.54□□□□□ -1.84
NEK3-211ENST00000629912 RPL37AP8A6NKH3 93 aa3.54□□□□□ -1.84
NEK3-211ENST00000629912 NDUFV3P56181 108 aaKnown RBP3.54□□□□□ -1.84
NEK3-211ENST00000629912 Q6ZQT0 140 aa3.54□□□□□ -1.84
NEK3-211ENST00000629912 Q6ZRX8 168 aa3.54□□□□□ -1.84
NEK3-211ENST00000629912 DSCR8Q96T75 97 aa3.54□□□□□ -1.84
NEK3-211ENST00000629912 LINC00846Q9NV44 126 aa3.54□□□□□ -1.84
NEK3-211ENST00000629912 LAMTOR3Q9UHA4 124 aa3.54□□□□□ -1.84
NEK3-211ENST00000629912 TENM2Q9NT68 2774 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 TRBV7-4A0A0J9YYF1 115 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 ETDCA0A1B0GVM5 59 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 A0A1W2PNN7 141 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 EPM2AB3EWF7 344 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 LINC01547P58512 204 aaPredicted RBP3.53□□□□□ -1.84
NEK3-211ENST00000629912 Q6JHZ5 121 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 REG3GQ6UW15 175 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 Q6ZR54 194 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 FAM19A5Q7Z5A7 132 aaPredicted RBP3.53□□□□□ -1.84
NEK3-211ENST00000629912 LINC00474Q9P2X8 69 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 LYSTQ99698 3801 aa3.53□□□□□ -1.84
NEK3-211ENST00000629912 IGLV5-48A0A075B6I7 105 aa3.52□□□□□ -1.85
NEK3-211ENST00000629912 LOC100996750A0A140TA64 210 aa3.52□□□□□ -1.85
NEK3-211ENST00000629912 Q8N377 158 aa3.52□□□□□ -1.85
NEK3-211ENST00000629912 Q9BRP9 147 aa3.52□□□□□ -1.85
NEK3-211ENST00000629912 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
NEK3-211ENST00000629912 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.51□□□□□ -1.85
NEK3-211ENST00000629912 A0A087WTM6 91 aa3.51□□□□□ -1.85
NEK3-211ENST00000629912 H0Y9J4 135 aa3.51□□□□□ -1.85
NEK3-211ENST00000629912 MEGF8Q7Z7M0 2845 aa3.5□□□□□ -1.85
NEK3-211ENST00000629912 IGKV2-24A0A0C4DH68 120 aa3.5□□□□□ -1.85
NEK3-211ENST00000629912 A0A1B0GW54 56 aa3.5□□□□□ -1.85
NEK3-211ENST00000629912 ATP5EP2Q5VTU8 51 aa3.5□□□□□ -1.85
NEK3-211ENST00000629912 UBL5Q9BZL1 73 aa3.5□□□□□ -1.85
NEK3-211ENST00000629912 A0A1B0GV72 72 aa3.49□□□□□ -1.85
NEK3-211ENST00000629912 M0R2N4 97 aa3.49□□□□□ -1.85
NEK3-211ENST00000629912 ERC2-IT1O76042 136 aa3.49□□□□□ -1.85
NEK3-211ENST00000629912 TNP2Q05952 138 aa3.49□□□□□ -1.85
NEK3-211ENST00000629912 DEFB105AQ8NG35 78 aa3.49□□□□□ -1.85
NEK3-211ENST00000629912 HECTD4Q9Y4D8 3996 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 IGKV3D-7A0A0C4DH55 119 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 CHTF8P0CG12 524 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 HIST1H4AP62805 103 aaKnown RBP3.48□□□□□ -1.85
NEK3-211ENST00000629912 UBE2BP63146 152 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 C1orf134Q5TEV5 83 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 PHF5AQ7RTV0 110 aaKnown RBP3.48□□□□□ -1.85
NEK3-211ENST00000629912 FAM19A1Q7Z5A9 133 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 ST20-AS1Q8NBB2 130 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 WWC2-AS2Q96NR7 200 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 ANAPC13Q9BS18 74 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
NEK3-211ENST00000629912 SPRR1BP22528 89 aa3.47□□□□□ -1.85
NEK3-211ENST00000629912 Q6ZVQ6 151 aa3.47□□□□□ -1.85
NEK3-211ENST00000629912 SMIM29Q86T20 159 aa3.47□□□□□ -1.85
NEK3-211ENST00000629912 KRTAP11-1Q8IUC1 163 aa3.47□□□□□ -1.85
NEK3-211ENST00000629912 SPACA4Q8TDM5 124 aa3.47□□□□□ -1.85
NEK3-211ENST00000629912 ALMS1Q8TCU4 4167 aa3.47□□□□□ -1.85
NEK3-211ENST00000629912 KMT2AQ03164 3969 aa3.46□□□□□ -1.85
NEK3-211ENST00000629912 DNAH11Q96DT5 4516 aa3.46□□□□□ -1.86
NEK3-211ENST00000629912 IGLV8-61A0A075B6I0 122 aa3.46□□□□□ -1.86
NEK3-211ENST00000629912 C3orf84H3BNL1 204 aa3.46□□□□□ -1.86
NEK3-211ENST00000629912 PANO1I0J062 215 aa3.46□□□□□ -1.86
NEK3-211ENST00000629912 BCE1O60756 84 aa3.46□□□□□ -1.86
NEK3-211ENST00000629912 CXCL6P80162 114 aa3.46□□□□□ -1.86
NEK3-211ENST00000629912 DPH3Q96FX2 82 aa3.46□□□□□ -1.86
NEK3-211ENST00000629912 FAM236AA0A1B0GUQ0 79 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 FAM236BA0A1B0GV22 79 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 A0A1W2PNM2 257 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 RTL8CO15255 209 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 LY6G6CO95867 125 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 PRLHP81277 87 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 C1orf137Q5JT78 98 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 LINC00476Q8WZB0 136 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms