RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 LINC01545Q5VT33 79 aa6.22□□□□□ -1.41
CHD2-217ENST00000629136 MIEN1Q9BRT3 115 aa6.22□□□□□ -1.41
CHD2-217ENST00000629136 SPANXB1Q9NS25 103 aaPredicted RBP6.22□□□□□ -1.41
CHD2-217ENST00000629136 ZNF706Q9Y5V0 76 aaPredicted RBP6.22□□□□□ -1.41
CHD2-217ENST00000629136 PCP4L1A6NKN8 68 aa6.21□□□□□ -1.42
CHD2-217ENST00000629136 B5MCH6 92 aa6.21□□□□□ -1.42
CHD2-217ENST00000629136 MUC2Q02817 5179 aa6.2□□□□□ -1.42
CHD2-217ENST00000629136 IGLV6-57P01721 117 aa6.2□□□□□ -1.42
CHD2-217ENST00000629136 LITAFQ99732 161 aa6.2□□□□□ -1.42
CHD2-217ENST00000629136 Q9BRP9 147 aa6.2□□□□□ -1.42
CHD2-217ENST00000629136 ERC2-IT1O76042 136 aa6.19□□□□□ -1.42
CHD2-217ENST00000629136 C3orf79P0CE67 100 aa6.19□□□□□ -1.42
CHD2-217ENST00000629136 S100A12P80511 92 aa6.19□□□□□ -1.42
CHD2-217ENST00000629136 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
CHD2-217ENST00000629136 Q6ZRX8 168 aa6.19□□□□□ -1.42
CHD2-217ENST00000629136 PPDPFQ9H3Y8 114 aa6.19□□□□□ -1.42
CHD2-217ENST00000629136 TRAV23DV6A0A075B6W5 121 aa6.18□□□□□ -1.42
CHD2-217ENST00000629136 COA6Q5JTJ3 125 aaKnown RBP6.18□□□□□ -1.42
CHD2-217ENST00000629136 TTTY13Q9BZ97 58 aa6.18□□□□□ -1.42
CHD2-217ENST00000629136 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
CHD2-217ENST00000629136 S100A7L2Q5SY68 101 aa6.17□□□□□ -1.42
CHD2-217ENST00000629136 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
CHD2-217ENST00000629136 TIMM17BO60830 172 aa6.16□□□□□ -1.42
CHD2-217ENST00000629136 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
CHD2-217ENST00000629136 GAGE2AQ6NT46 116 aa6.16□□□□□ -1.42
CHD2-217ENST00000629136 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
CHD2-217ENST00000629136 Q8NBF4 154 aa6.16□□□□□ -1.42
CHD2-217ENST00000629136 SPANXCQ9NY87 97 aa6.16□□□□□ -1.42
CHD2-217ENST00000629136 ZNF815PA8K554 130 aa6.15□□□□□ -1.42
CHD2-217ENST00000629136 ZNF73O43830 326 aaPredicted RBP6.15□□□□□ -1.42
CHD2-217ENST00000629136 KRTDAPP60985 99 aa6.15□□□□□ -1.42
CHD2-217ENST00000629136 IGLV7-46A0A075B6I9 117 aa6.13□□□□□ -1.43
CHD2-217ENST00000629136 IGLV9-49A0A0B4J1Y8 123 aa6.13□□□□□ -1.43
CHD2-217ENST00000629136 MOBPQ13875 183 aa6.13□□□□□ -1.43
CHD2-217ENST00000629136 JOSD1Q15040 202 aaPredicted RBP6.12□□□□□ -1.43
CHD2-217ENST00000629136 ATOH7Q8N100 152 aa6.11□□□□□ -1.43
CHD2-217ENST00000629136 ST20-AS1Q8NBB2 130 aa6.11□□□□□ -1.43
CHD2-217ENST00000629136 SPANXDQ9BXN6 97 aa6.11□□□□□ -1.43
CHD2-217ENST00000629136 SPINK1P00995 79 aa6.1□□□□□ -1.43
CHD2-217ENST00000629136 OR13C6PQ8NH95 151 aa6.1□□□□□ -1.43
CHD2-217ENST00000629136 C20orf202A1L168 122 aa6.09□□□□□ -1.43
CHD2-217ENST00000629136 FP248Q71RG6 208 aaPredicted RBP6.09□□□□□ -1.43
CHD2-217ENST00000629136 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
CHD2-217ENST00000629136 ELOF1P60002 83 aaKnown RBP6.08□□□□□ -1.44
CHD2-217ENST00000629136 RPS29P62273 56 aaKnown RBP6.08□□□□□ -1.44
CHD2-217ENST00000629136 SCGB1D4Q6XE38 83 aa6.08□□□□□ -1.44
CHD2-217ENST00000629136 Q8N377 158 aa6.08□□□□□ -1.44
CHD2-217ENST00000629136 HINT1P49773 126 aaPredicted RBP6.07□□□□□ -1.44
CHD2-217ENST00000629136 KRTAP13-3Q3SY46 172 aa6.07□□□□□ -1.44
CHD2-217ENST00000629136 C9orf153Q5TBE3 101 aa6.07□□□□□ -1.44
CHD2-217ENST00000629136 PCP2Q8IVA1 136 aa6.07□□□□□ -1.44
CHD2-217ENST00000629136 LINC00518Q8N0U6 118 aa6.07□□□□□ -1.44
CHD2-217ENST00000629136 SPRR1BP22528 89 aa6.06□□□□□ -1.44
CHD2-217ENST00000629136 C6orf99Q4VX62 202 aa6.06□□□□□ -1.44
CHD2-217ENST00000629136 HIST3H2BBQ8N257 126 aa6.06□□□□□ -1.44
CHD2-217ENST00000629136 IFITM1P13164 125 aa6.05□□□□□ -1.44
CHD2-217ENST00000629136 COX7BP24311 80 aa6.05□□□□□ -1.44
CHD2-217ENST00000629136 SEC61GP60059 68 aa6.05□□□□□ -1.44
CHD2-217ENST00000629136 HIST1H2BLQ99880 126 aa6.05□□□□□ -1.44
CHD2-217ENST00000629136 DHRS4-AS1Q9P1J3 65 aa6.05□□□□□ -1.44
CHD2-217ENST00000629136 H3BS24 57 aa6.04□□□□□ -1.44
CHD2-217ENST00000629136 AKR1D1P51857 326 aa6.04□□□□□ -1.44
CHD2-217ENST00000629136 Q6ZVH6 145 aa6.04□□□□□ -1.44
CHD2-217ENST00000629136 MUSTN1Q8IVN3 82 aa6.04□□□□□ -1.44
CHD2-217ENST00000629136 A0A0U1RQV1 116 aa6.03□□□□□ -1.44
CHD2-217ENST00000629136 COPS9Q8WXC6 57 aa6.03□□□□□ -1.44
CHD2-217ENST00000629136 SNRPEP62304 92 aaKnown RBP6.02□□□□□ -1.45
CHD2-217ENST00000629136 TRBV7-6A0A0J9YX20 115 aa6.01□□□□□ -1.45
CHD2-217ENST00000629136 A6NDN8 102 aa6.01□□□□□ -1.45
CHD2-217ENST00000629136 SLC25A20O43772 301 aa6.01□□□□□ -1.45
CHD2-217ENST00000629136 S100A1P23297 94 aa6.01□□□□□ -1.45
CHD2-217ENST00000629136 S100A2P29034 98 aa6.01□□□□□ -1.45
CHD2-217ENST00000629136 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
CHD2-217ENST00000629136 A0A1B0GWB2 263 aa6□□□□□ -1.45
CHD2-217ENST00000629136 LINC01547P58512 204 aaPredicted RBP6□□□□□ -1.45
CHD2-217ENST00000629136 SLC25A34Q6PIV7 304 aa6□□□□□ -1.45
CHD2-217ENST00000629136 VAMP3Q15836 100 aa5.99□□□□□ -1.45
CHD2-217ENST00000629136 Q1RN00 199 aa5.99□□□□□ -1.45
CHD2-217ENST00000629136 LCE2AQ5TA79 106 aaPredicted RBP5.99□□□□□ -1.45
CHD2-217ENST00000629136 LAMTOR3Q9UHA4 124 aa5.99□□□□□ -1.45
CHD2-217ENST00000629136 IGLV5-48A0A075B6I7 105 aa5.98□□□□□ -1.45
CHD2-217ENST00000629136 HRCT1Q6UXD1 115 aa5.98□□□□□ -1.45
CHD2-217ENST00000629136 SMIM29Q86T20 159 aa5.98□□□□□ -1.45
CHD2-217ENST00000629136 DEFB105AQ8NG35 78 aa5.98□□□□□ -1.45
CHD2-217ENST00000629136 SMIM11BQ8TCY0 68 aa5.98□□□□□ -1.45
CHD2-217ENST00000629136 TRAV13-2A0A0B4J235 113 aa5.97□□□□□ -1.45
CHD2-217ENST00000629136 TEX49A0A1B0GTD5 131 aa5.97□□□□□ -1.45
CHD2-217ENST00000629136 TAL2Q16559 108 aa5.97□□□□□ -1.45
CHD2-217ENST00000629136 ASB16-AS1Q495Z4 193 aa5.97□□□□□ -1.45
CHD2-217ENST00000629136 LIMD2Q9BT23 127 aa5.96□□□□□ -1.46
CHD2-217ENST00000629136 LOC105371267A0A1B0GV96 52 aa5.95□□□□□ -1.46
CHD2-217ENST00000629136 XP32Q5T750 250 aa5.95□□□□□ -1.46
CHD2-217ENST00000629136 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
CHD2-217ENST00000629136 CD164Q04900 197 aa5.94□□□□□ -1.46
CHD2-217ENST00000629136 PRO1933Q9H354 126 aa5.94□□□□□ -1.46
CHD2-217ENST00000629136 NHP2Q9NX24 153 aaKnown RBP5.93□□□□□ -1.46
CHD2-217ENST00000629136 A0A0G2JQZ4 141 aa5.92□□□□□ -1.46
CHD2-217ENST00000629136 H7C2G1 150 aa5.92□□□□□ -1.46
CHD2-217ENST00000629136 SEC61BP60468 96 aaKnown RBP5.92□□□□□ -1.46
CHD2-217ENST00000629136 TRIAP1O43715 76 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms