RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 MEGF8Q7Z7M0 2845 aa4.82□□□□□ -1.64
CTNNA1-244ENST00000627109 TMEM256-PLSCR3K7ERE1 68 aa4.82□□□□□ -1.64
CTNNA1-244ENST00000627109 SPTSSBQ8NFR3 76 aa4.82□□□□□ -1.64
CTNNA1-244ENST00000627109 IGKV2D-24A0A075B6R9 120 aa4.82□□□□□ -1.64
CTNNA1-244ENST00000627109 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
CTNNA1-244ENST00000627109 Q8N814 137 aa4.82□□□□□ -1.64
CTNNA1-244ENST00000627109 UBL5Q9BZL1 73 aa4.82□□□□□ -1.64
CTNNA1-244ENST00000627109 NKAPP1Q8N9T2 125 aa4.81□□□□□ -1.64
CTNNA1-244ENST00000627109 IGLV6-57P01721 117 aa4.81□□□□□ -1.64
CTNNA1-244ENST00000627109 hADV29S1A0JD25 119 aa4.81□□□□□ -1.64
CTNNA1-244ENST00000627109 JMJD7-PLA2G4BH0Y9G9 81 aa4.81□□□□□ -1.64
CTNNA1-244ENST00000627109 ENHOQ6UWT2 76 aa4.81□□□□□ -1.64
CTNNA1-244ENST00000627109 ANK2Q01484 3957 aa4.81□□□□□ -1.64
CTNNA1-244ENST00000627109 Q6ZQY7 126 aa4.8□□□□□ -1.64
CTNNA1-244ENST00000627109 TRAV23DV6A0A075B6W5 121 aa4.8□□□□□ -1.64
CTNNA1-244ENST00000627109 LYPD5Q6UWN5 251 aa4.8□□□□□ -1.64
CTNNA1-244ENST00000627109 Q75L30 129 aa4.8□□□□□ -1.64
CTNNA1-244ENST00000627109 KPRPQ5T749 579 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-244ENST00000627109 WFDC10BQ8IUB3 73 aa4.79□□□□□ -1.64
CTNNA1-244ENST00000627109 ATOX1O00244 68 aa4.79□□□□□ -1.64
CTNNA1-244ENST00000627109 Q6JHZ5 121 aa4.79□□□□□ -1.64
CTNNA1-244ENST00000627109 C3orf22Q8N5N4 141 aa4.79□□□□□ -1.64
CTNNA1-244ENST00000627109 B9D2Q9BPU9 175 aa4.79□□□□□ -1.64
CTNNA1-244ENST00000627109 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 TRBV10-3A0A0K0K1G6 114 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 DEFB105AQ8NG35 78 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 DIRC1Q969H9 104 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 UQCRQO14949 82 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 CCKP06307 115 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 LINC00575Q6W349 94 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 Q6ZTC4 211 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 TRBV7-6A0A0J9YX20 115 aa4.78□□□□□ -1.64
CTNNA1-244ENST00000627109 TENM2Q9NT68 2774 aa4.77□□□□□ -1.65
CTNNA1-244ENST00000627109 PLA2G1BP04054 148 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-244ENST00000627109 SCXQ7RTU7 201 aa4.77□□□□□ -1.65
CTNNA1-244ENST00000627109 H3BQ85 93 aa4.77□□□□□ -1.65
CTNNA1-244ENST00000627109 LOC110117498A0A087WWA1 95 aa4.76□□□□□ -1.65
CTNNA1-244ENST00000627109 COX7BP24311 80 aa4.76□□□□□ -1.65
CTNNA1-244ENST00000627109 C6orf48Q9UBA6 75 aa4.76□□□□□ -1.65
CTNNA1-244ENST00000627109 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-244ENST00000627109 DEFB131BA0A096LNP1 70 aa4.75□□□□□ -1.65
CTNNA1-244ENST00000627109 COX7CP15954 63 aa4.75□□□□□ -1.65
CTNNA1-244ENST00000627109 UPK3BQ9BT76 320 aa4.75□□□□□ -1.65
CTNNA1-244ENST00000627109 ZNF73O43830 326 aaPredicted RBP4.75□□□□□ -1.65
CTNNA1-244ENST00000627109 Q6ZRU5 148 aa4.75□□□□□ -1.65
CTNNA1-244ENST00000627109 CDK2AP2O75956 126 aa4.74□□□□□ -1.65
CTNNA1-244ENST00000627109 FUSP35637 526 aaKnown RBP eCLIP4.74□□□□□ -1.65
CTNNA1-244ENST00000627109 ATP5EP2Q5VTU8 51 aa4.74□□□□□ -1.65
CTNNA1-244ENST00000627109 C15orf56Q8N910 161 aa4.74□□□□□ -1.65
CTNNA1-244ENST00000627109 TMEM258P61165 79 aa4.73□□□□□ -1.65
CTNNA1-244ENST00000627109 Q6ZQT0 140 aa4.73□□□□□ -1.65
CTNNA1-244ENST00000627109 TM2D3Q9BRN9 247 aa4.73□□□□□ -1.65
CTNNA1-244ENST00000627109 LINC01556Q5JQF7 62 aa4.73□□□□□ -1.65
CTNNA1-244ENST00000627109 C20orf197Q8N268 126 aa4.73□□□□□ -1.65
CTNNA1-244ENST00000627109 SERP2Q8N6R1 65 aa4.73□□□□□ -1.65
CTNNA1-244ENST00000627109 ELOF1P60002 83 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-244ENST00000627109 ESRGQ1W209 222 aa4.72□□□□□ -1.65
CTNNA1-244ENST00000627109 A8MUN3 132 aa4.72□□□□□ -1.65
CTNNA1-244ENST00000627109 SYCNQ0VAF6 134 aa4.72□□□□□ -1.65
CTNNA1-244ENST00000627109 RPL37AP8A6NKH3 93 aa4.71□□□□□ -1.65
CTNNA1-244ENST00000627109 TLX1NBP0CAT3 122 aa4.71□□□□□ -1.66
CTNNA1-244ENST00000627109 CRYGAP11844 174 aa4.71□□□□□ -1.66
CTNNA1-244ENST00000627109 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 C3orf84H3BNL1 204 aa4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 M0R2N4 97 aa4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 M0R378 163 aa4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 DNAH10OSP0CZ25 163 aa4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 UBE2DNLQ8IWF7 75 aa4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 TRBV7-4A0A0J9YYF1 115 aa4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 WWC2-AS2Q96NR7 200 aa4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 PDE6GP18545 87 aa4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 DPH3Q96FX2 82 aa4.7□□□□□ -1.66
CTNNA1-244ENST00000627109 BCE1O60756 84 aa4.69□□□□□ -1.66
CTNNA1-244ENST00000627109 IGLV5-37A0A075B6J1 123 aa4.69□□□□□ -1.66
CTNNA1-244ENST00000627109 H0Y9J4 135 aa4.69□□□□□ -1.66
CTNNA1-244ENST00000627109 ETDCA0A1B0GVM5 59 aa4.68□□□□□ -1.66
CTNNA1-244ENST00000627109 LINC01547P58512 204 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-244ENST00000627109 UBE2BP63146 152 aa4.68□□□□□ -1.66
CTNNA1-244ENST00000627109 NREPQ16612 68 aa4.68□□□□□ -1.66
CTNNA1-244ENST00000627109 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
CTNNA1-244ENST00000627109 SNURFQ9Y675 71 aa4.68□□□□□ -1.66
CTNNA1-244ENST00000627109 LY6G6CO95867 125 aa4.68□□□□□ -1.66
CTNNA1-244ENST00000627109 Q6ZRP5 223 aa4.68□□□□□ -1.66
CTNNA1-244ENST00000627109 COL7A1Q02388 2944 aa4.67□□□□□ -1.66
CTNNA1-244ENST00000627109 TRAV10A0A0B4J240 114 aa4.67□□□□□ -1.66
CTNNA1-244ENST00000627109 Q8N9L7 120 aa4.67□□□□□ -1.66
CTNNA1-244ENST00000627109 HUWE1Q7Z6Z7 4374 aaKnown RBP4.67□□□□□ -1.66
CTNNA1-244ENST00000627109 IGKV2-24A0A0C4DH68 120 aa4.67□□□□□ -1.66
CTNNA1-244ENST00000627109 PSCAO43653 123 aa4.67□□□□□ -1.66
CTNNA1-244ENST00000627109 KCNQ1DNQ9H478 68 aa4.67□□□□□ -1.66
CTNNA1-244ENST00000627109 KRTAP4-16G5E9R7 235 aaPredicted RBP4.66□□□□□ -1.66
CTNNA1-244ENST00000627109 CXCL6P80162 114 aa4.66□□□□□ -1.66
CTNNA1-244ENST00000627109 CYSTM1Q9H1C7 97 aa4.66□□□□□ -1.66
CTNNA1-244ENST00000627109 SPRR1AP35321 89 aa4.65□□□□□ -1.66
CTNNA1-244ENST00000627109 Q5XG85 94 aa4.65□□□□□ -1.66
CTNNA1-244ENST00000627109 PRKDCP78527 4128 aaKnown RBP4.65□□□□□ -1.67
CTNNA1-244ENST00000627109 C7orf33Q8WU49 177 aa4.64□□□□□ -1.67
CTNNA1-244ENST00000627109 FAM168BA1KXE4 195 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms