RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 TRBV7-6A0A0J9YX20 115 aa10.04□□□□□ -0.8
LINC00552-201ENST00000625151 M0R378 163 aa10.04□□□□□ -0.8
LINC00552-201ENST00000625151 TENM3Q9P273 2699 aa10.03□□□□□ -0.8
LINC00552-201ENST00000625151 H3BNG1 76 aa10.03□□□□□ -0.8
LINC00552-201ENST00000625151 C20orf197Q8N268 126 aa10.03□□□□□ -0.8
LINC00552-201ENST00000625151 ESRGQ1W209 222 aa10.03□□□□□ -0.8
LINC00552-201ENST00000625151 C1orf195Q5TG92 126 aa10.02□□□□□ -0.81
LINC00552-201ENST00000625151 LINC00528Q8N1L1 170 aa10.02□□□□□ -0.81
LINC00552-201ENST00000625151 TRAV10A0A0B4J240 114 aa10.02□□□□□ -0.81
LINC00552-201ENST00000625151 FAM236DA0A1B0GTK5 79 aa10.02□□□□□ -0.81
LINC00552-201ENST00000625151 FAM236CP0DP71 79 aa10.02□□□□□ -0.81
LINC00552-201ENST00000625151 KRTAP10-11P60412 298 aa10.02□□□□□ -0.81
LINC00552-201ENST00000625151 CXCL6P80162 114 aa10.02□□□□□ -0.81
LINC00552-201ENST00000625151 Q6ZRP5 223 aa10.02□□□□□ -0.81
LINC00552-201ENST00000625151 SCXQ7RTU7 201 aa10.01□□□□□ -0.81
LINC00552-201ENST00000625151 MDFIQ99750 246 aa10□□□□□ -0.81
LINC00552-201ENST00000625151 NOTCH1P46531 2555 aa10□□□□□ -0.81
LINC00552-201ENST00000625151 TRAV7A0A075B6U4 112 aa9.99□□□□□ -0.81
LINC00552-201ENST00000625151 SMIM26A0A096LP01 95 aa9.98□□□□□ -0.81
LINC00552-201ENST00000625151 IGKV2D-24A0A075B6R9 120 aa9.98□□□□□ -0.81
LINC00552-201ENST00000625151 BCE1O60756 84 aa9.98□□□□□ -0.81
LINC00552-201ENST00000625151 NBEAL1Q6ZS30 2694 aa9.97□□□□□ -0.81
LINC00552-201ENST00000625151 LINC01556Q5JQF7 62 aa9.95□□□□□ -0.82
LINC00552-201ENST00000625151 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
LINC00552-201ENST00000625151 SERTAD4-AS1Q5TG53 156 aa9.94□□□□□ -0.82
LINC00552-201ENST00000625151 H7BZZ5 65 aa9.93□□□□□ -0.82
LINC00552-201ENST00000625151 DEFB131BA0A096LNP1 70 aa9.92□□□□□ -0.82
LINC00552-201ENST00000625151 MGAM2Q2M2H8 2515 aa9.91□□□□□ -0.82
LINC00552-201ENST00000625151 C7orf33Q8WU49 177 aa9.91□□□□□ -0.82
LINC00552-201ENST00000625151 KCNQ1DNQ9H478 68 aa9.91□□□□□ -0.82
LINC00552-201ENST00000625151 SNURFQ9Y675 71 aa9.91□□□□□ -0.82
LINC00552-201ENST00000625151 DNHD1Q96M86 4753 aa9.91□□□□□ -0.82
LINC00552-201ENST00000625151 PRB2P02812 416 aaPredicted RBP9.91□□□□□ -0.82
LINC00552-201ENST00000625151 NKAPP1Q8N9T2 125 aa9.91□□□□□ -0.82
LINC00552-201ENST00000625151 TM2D3Q9BRN9 247 aa9.91□□□□□ -0.82
LINC00552-201ENST00000625151 KLKP1Q107X0 134 aa9.9□□□□□ -0.82
LINC00552-201ENST00000625151 Q8N9L7 120 aa9.9□□□□□ -0.82
LINC00552-201ENST00000625151 DEFB105AQ8NG35 78 aa9.89□□□□□ -0.83
LINC00552-201ENST00000625151 RMI2Q96E14 147 aa9.89□□□□□ -0.83
LINC00552-201ENST00000625151 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
LINC00552-201ENST00000625151 Q8N377 158 aa9.88□□□□□ -0.83
LINC00552-201ENST00000625151 C11orf45Q8TAV5 145 aa9.88□□□□□ -0.83
LINC00552-201ENST00000625151 C3orf84H3BNL1 204 aa9.87□□□□□ -0.83
LINC00552-201ENST00000625151 BRK1Q8WUW1 75 aa9.86□□□□□ -0.83
LINC00552-201ENST00000625151 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
LINC00552-201ENST00000625151 DNAH10OSP0CZ25 163 aa9.86□□□□□ -0.83
LINC00552-201ENST00000625151 FAM168BA1KXE4 195 aa9.85□□□□□ -0.83
LINC00552-201ENST00000625151 IGKV4-1P06312 121 aa9.85□□□□□ -0.83
LINC00552-201ENST00000625151 NREPQ16612 68 aa9.85□□□□□ -0.83
LINC00552-201ENST00000625151 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
LINC00552-201ENST00000625151 BPY2O14599 106 aa9.84□□□□□ -0.83
LINC00552-201ENST00000625151 CASC10Q5T4H9 136 aa9.84□□□□□ -0.83
LINC00552-201ENST00000625151 F8WEM9 126 aa9.83□□□□□ -0.84
LINC00552-201ENST00000625151 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
LINC00552-201ENST00000625151 ATP5EP56381 51 aaPredicted RBP9.83□□□□□ -0.84
LINC00552-201ENST00000625151 Q9BRP9 147 aa9.83□□□□□ -0.84
LINC00552-201ENST00000625151 IGLV5-48A0A075B6I7 105 aa9.83□□□□□ -0.84
LINC00552-201ENST00000625151 A0A0U1RQV1 116 aa9.83□□□□□ -0.84
LINC00552-201ENST00000625151 Q6ZRX8 168 aa9.82□□□□□ -0.84
LINC00552-201ENST00000625151 HUWE1Q7Z6Z7 4374 aaKnown RBP9.82□□□□□ -0.84
LINC00552-201ENST00000625151 KRTAP4-16G5E9R7 235 aaPredicted RBP9.82□□□□□ -0.84
LINC00552-201ENST00000625151 PLA2G2DQ9UNK4 145 aa9.81□□□□□ -0.84
LINC00552-201ENST00000625151 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
LINC00552-201ENST00000625151 IGLV1-50A0A075B6I6 118 aa9.8□□□□□ -0.84
LINC00552-201ENST00000625151 DHRS4-AS1Q9P1J3 65 aa9.8□□□□□ -0.84
LINC00552-201ENST00000625151 LINC00588Q9Y4M8 146 aa9.8□□□□□ -0.84
LINC00552-201ENST00000625151 ST20-AS1Q8NBB2 130 aa9.79□□□□□ -0.84
LINC00552-201ENST00000625151 PRYO14603 147 aa9.78□□□□□ -0.84
LINC00552-201ENST00000625151 NDUFC1O43677 76 aa9.78□□□□□ -0.84
LINC00552-201ENST00000625151 SPRR1AP35321 89 aa9.78□□□□□ -0.84
LINC00552-201ENST00000625151 IGLV5-37A0A075B6J1 123 aa9.78□□□□□ -0.84
LINC00552-201ENST00000625151 ETDCA0A1B0GVM5 59 aa9.78□□□□□ -0.84
LINC00552-201ENST00000625151 A0A1W2PNM2 257 aa9.78□□□□□ -0.84
LINC00552-201ENST00000625151 K7EIL1 84 aa9.77□□□□□ -0.84
LINC00552-201ENST00000625151 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.84
LINC00552-201ENST00000625151 TNP2Q05952 138 aa9.77□□□□□ -0.85
LINC00552-201ENST00000625151 OCR1Q9BZK8 76 aa9.76□□□□□ -0.85
LINC00552-201ENST00000625151 FUSP35637 526 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC00552-201ENST00000625151 DNAH9Q9NYC9 4486 aa9.75□□□□□ -0.85
LINC00552-201ENST00000625151 ERC2-IT1O76042 136 aa9.75□□□□□ -0.85
LINC00552-201ENST00000625151 C1orf137Q5JT78 98 aa9.75□□□□□ -0.85
LINC00552-201ENST00000625151 COL7A1Q02388 2944 aa9.75□□□□□ -0.85
LINC00552-201ENST00000625151 PMAIP1Q13794 54 aa9.74□□□□□ -0.85
LINC00552-201ENST00000625151 MRPL55Q7Z7F7 128 aaKnown RBP9.73□□□□□ -0.85
LINC00552-201ENST00000625151 DNAH10Q8IVF4 4471 aa9.72□□□□□ -0.85
LINC00552-201ENST00000625151 LINC00474Q9P2X8 69 aa9.72□□□□□ -0.85
LINC00552-201ENST00000625151 Q8NBF4 154 aa9.71□□□□□ -0.85
LINC00552-201ENST00000625151 PRR15Q8IV56 129 aa9.7□□□□□ -0.86
LINC00552-201ENST00000625151 LYSTQ99698 3801 aa9.7□□□□□ -0.86
LINC00552-201ENST00000625151 A0A1B0GW54 56 aa9.7□□□□□ -0.86
LINC00552-201ENST00000625151 UBE2BP63146 152 aa9.7□□□□□ -0.86
LINC00552-201ENST00000625151 SMIM29Q86T20 159 aa9.69□□□□□ -0.86
LINC00552-201ENST00000625151 PRKDCP78527 4128 aaKnown RBP9.69□□□□□ -0.86
LINC00552-201ENST00000625151 SPRR4Q96PI1 79 aa9.69□□□□□ -0.86
LINC00552-201ENST00000625151 CD164Q04900 197 aa9.68□□□□□ -0.86
LINC00552-201ENST00000625151 REG3GQ6UW15 175 aa9.67□□□□□ -0.86
LINC00552-201ENST00000625151 HIGD2AQ9BW72 106 aa9.67□□□□□ -0.86
LINC00552-201ENST00000625151 FAM30AQ9NZY2 134 aa9.67□□□□□ -0.86
LINC00552-201ENST00000625151 DSCR10P59022 87 aa9.66□□□□□ -0.86
LINC00552-201ENST00000625151 MEGF8Q7Z7M0 2845 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms