RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 XAGE1AQ9HD64 81 aa13.95□□□□□ -0.18
SGMS1-210ENST00000619438 VPREB1P12018 145 aa13.95□□□□□ -0.18
SGMS1-210ENST00000619438 LINC00575Q6W349 94 aa13.95□□□□□ -0.18
SGMS1-210ENST00000619438 SYCNQ0VAF6 134 aa13.94□□□□□ -0.18
SGMS1-210ENST00000619438 IGLV5-52A0A0A0MRZ9 124 aa13.92□□□□□ -0.18
SGMS1-210ENST00000619438 SLPIP03973 132 aa13.92□□□□□ -0.18
SGMS1-210ENST00000619438 Q6Q795 121 aa13.92□□□□□ -0.18
SGMS1-210ENST00000619438 SDIM1Q6ZPB5 146 aa13.92□□□□□ -0.18
SGMS1-210ENST00000619438 LRP1BQ9NZR2 4599 aa13.92□□□□□ -0.18
SGMS1-210ENST00000619438 TRBV10-3A0A0K0K1G6 114 aa13.91□□□□□ -0.18
SGMS1-210ENST00000619438 TMEM256-PLSCR3K7ERE1 68 aa13.91□□□□□ -0.18
SGMS1-210ENST00000619438 M0R378 163 aa13.91□□□□□ -0.18
SGMS1-210ENST00000619438 TRAV23DV6A0A075B6W5 121 aa13.9□□□□□ -0.18
SGMS1-210ENST00000619438 TRBV7-6A0A0J9YX20 115 aa13.9□□□□□ -0.18
SGMS1-210ENST00000619438 CDK2AP2O75956 126 aa13.9□□□□□ -0.18
SGMS1-210ENST00000619438 DNAH5Q8TE73 4624 aa13.9□□□□□ -0.18
SGMS1-210ENST00000619438 TLX1NBP0CAT3 122 aa13.89□□□□□ -0.19
SGMS1-210ENST00000619438 C9orf129Q5T035 196 aaKnown RBP13.89□□□□□ -0.19
SGMS1-210ENST00000619438 RYR1P21817 5038 aa13.89□□□□□ -0.19
SGMS1-210ENST00000619438 hADV29S1A0JD25 119 aa13.88□□□□□ -0.19
SGMS1-210ENST00000619438 Q6ZRP5 223 aa13.88□□□□□ -0.19
SGMS1-210ENST00000619438 DIRC1Q969H9 104 aa13.88□□□□□ -0.19
SGMS1-210ENST00000619438 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.87□□□□□ -0.19
SGMS1-210ENST00000619438 JMJD7-PLA2G4BH0Y9G9 81 aa13.87□□□□□ -0.19
SGMS1-210ENST00000619438 H3BQ85 93 aa13.87□□□□□ -0.19
SGMS1-210ENST00000619438 GAGE2BQ13066 116 aa13.86□□□□□ -0.19
SGMS1-210ENST00000619438 GAGE2EQ4V326 116 aa13.86□□□□□ -0.19
SGMS1-210ENST00000619438 GAGE2DQ9UEU5 116 aa13.86□□□□□ -0.19
SGMS1-210ENST00000619438 ZNF73O43830 326 aaPredicted RBP13.85□□□□□ -0.19
SGMS1-210ENST00000619438 KRTAP10-1P60331 282 aa13.85□□□□□ -0.19
SGMS1-210ENST00000619438 HSPG2P98160 4391 aa13.84□□□□□ -0.19
SGMS1-210ENST00000619438 PCLOQ9Y6V0 5065 aa13.84□□□□□ -0.19
SGMS1-210ENST00000619438 USP17L23D6RBM5 183 aa13.84□□□□□ -0.19
SGMS1-210ENST00000619438 GAGE2AQ6NT46 116 aa13.84□□□□□ -0.19
SGMS1-210ENST00000619438 LINC00643Q86TS7 51 aa13.84□□□□□ -0.19
SGMS1-210ENST00000619438 C14orf132Q9NPU4 83 aa13.84□□□□□ -0.19
SGMS1-210ENST00000619438 TRBV7-7A0A0K0K1E9 115 aa13.83□□□□□ -0.2
SGMS1-210ENST00000619438 C14orf177Q52M58 125 aa13.82□□□□□ -0.2
SGMS1-210ENST00000619438 PLA2G2DQ9UNK4 145 aa13.82□□□□□ -0.2
SGMS1-210ENST00000619438 ELOF1P60002 83 aaKnown RBP13.82□□□□□ -0.2
SGMS1-210ENST00000619438 SMCR5Q8TEV8 140 aa13.81□□□□□ -0.2
SGMS1-210ENST00000619438 APOBP04114 4563 aaKnown RBP13.81□□□□□ -0.2
SGMS1-210ENST00000619438 COX7BP24311 80 aa13.8□□□□□ -0.2
SGMS1-210ENST00000619438 IMUPQ9GZP8 106 aa13.8□□□□□ -0.2
SGMS1-210ENST00000619438 KRTAP17-1Q9BYP8 105 aa13.79□□□□□ -0.2
SGMS1-210ENST00000619438 A0A1B0GV72 72 aa13.78□□□□□ -0.2
SGMS1-210ENST00000619438 CCKP06307 115 aa13.78□□□□□ -0.2
SGMS1-210ENST00000619438 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.77□□□□□ -0.21
SGMS1-210ENST00000619438 GHRHP01286 108 aa13.76□□□□□ -0.21
SGMS1-210ENST00000619438 KRTAP4-5Q9BYR2 181 aa13.76□□□□□ -0.21
SGMS1-210ENST00000619438 IGLV5-37A0A075B6J1 123 aa13.75□□□□□ -0.21
SGMS1-210ENST00000619438 Q6ZQY7 126 aa13.74□□□□□ -0.21
SGMS1-210ENST00000619438 KCNQ1DNQ9H478 68 aa13.74□□□□□ -0.21
SGMS1-210ENST00000619438 LINC00528Q8N1L1 170 aa13.73□□□□□ -0.21
SGMS1-210ENST00000619438 NKAPP1Q8N9T2 125 aa13.73□□□□□ -0.21
SGMS1-210ENST00000619438 SERTAD4-AS1Q5TG53 156 aa13.72□□□□□ -0.21
SGMS1-210ENST00000619438 ABCA13Q86UQ4 5058 aa13.71□□□□□ -0.21
SGMS1-210ENST00000619438 Q8N1X5 172 aa13.71□□□□□ -0.21
SGMS1-210ENST00000619438 NDUFV3P56181 108 aaKnown RBP13.7□□□□□ -0.22
SGMS1-210ENST00000619438 C7orf33Q8WU49 177 aa13.7□□□□□ -0.22
SGMS1-210ENST00000619438 LOC110117498A0A087WWA1 95 aa13.69□□□□□ -0.22
SGMS1-210ENST00000619438 HAMPP81172 84 aa13.69□□□□□ -0.22
SGMS1-210ENST00000619438 LINC00846Q9NV44 126 aa13.69□□□□□ -0.22
SGMS1-210ENST00000619438 FAM30AQ9NZY2 134 aa13.69□□□□□ -0.22
SGMS1-210ENST00000619438 RBM3P98179 157 aaKnown RBP13.69□□□□□ -0.22
SGMS1-210ENST00000619438 LOC107984640A0A0U1RRK4 108 aa13.68□□□□□ -0.22
SGMS1-210ENST00000619438 ANAPC13Q9BS18 74 aa13.66□□□□□ -0.22
SGMS1-210ENST00000619438 SMR3BP02814 79 aaPredicted RBP13.66□□□□□ -0.22
SGMS1-210ENST00000619438 PDE6GP18545 87 aa13.66□□□□□ -0.22
SGMS1-210ENST00000619438 Q6JHZ5 121 aa13.66□□□□□ -0.22
SGMS1-210ENST00000619438 LAMTOR3Q9UHA4 124 aa13.66□□□□□ -0.22
SGMS1-210ENST00000619438 Q6ZQT0 140 aa13.65□□□□□ -0.22
SGMS1-210ENST00000619438 EPM2AB3EWF7 344 aa13.63□□□□□ -0.23
SGMS1-210ENST00000619438 PRYO14603 147 aa13.63□□□□□ -0.23
SGMS1-210ENST00000619438 CNBPP62633 177 aaKnown RBP13.63□□□□□ -0.23
SGMS1-210ENST00000619438 IGLV1-50A0A075B6I6 118 aa13.62□□□□□ -0.23
SGMS1-210ENST00000619438 C9orf163Q8N9P6 203 aa13.62□□□□□ -0.23
SGMS1-210ENST00000619438 SPRR1AP35321 89 aa13.61□□□□□ -0.23
SGMS1-210ENST00000619438 Q6ZSA8 131 aa13.61□□□□□ -0.23
SGMS1-210ENST00000619438 KRTAP7-1Q8IUC3 87 aa13.61□□□□□ -0.23
SGMS1-210ENST00000619438 DSCR8Q96T75 97 aa13.6□□□□□ -0.23
SGMS1-210ENST00000619438 KRTAP4-16G5E9R7 235 aaPredicted RBP13.59□□□□□ -0.23
SGMS1-210ENST00000619438 FAM168BA1KXE4 195 aa13.59□□□□□ -0.23
SGMS1-210ENST00000619438 FAM229AH3BQW9 127 aa13.59□□□□□ -0.23
SGMS1-210ENST00000619438 DHRS4-AS1Q9P1J3 65 aa13.57□□□□□ -0.24
SGMS1-210ENST00000619438 TRBV7-4A0A0J9YYF1 115 aa13.56□□□□□ -0.24
SGMS1-210ENST00000619438 ATP5EP2Q5VTU8 51 aa13.56□□□□□ -0.24
SGMS1-210ENST00000619438 MRPL55Q7Z7F7 128 aaKnown RBP13.56□□□□□ -0.24
SGMS1-210ENST00000619438 Q5VSD8 79 aa13.56□□□□□ -0.24
SGMS1-210ENST00000619438 Q6ZRX8 168 aa13.56□□□□□ -0.24
SGMS1-210ENST00000619438 B5MCH6 92 aa13.55□□□□□ -0.24
SGMS1-210ENST00000619438 SCXQ7RTU7 201 aa13.55□□□□□ -0.24
SGMS1-210ENST00000619438 DPH3Q96FX2 82 aa13.54□□□□□ -0.24
SGMS1-210ENST00000619438 SRRM2Q9UQ35 2752 aaKnown RBP13.54□□□□□ -0.24
SGMS1-210ENST00000619438 DNAH8Q96JB1 4490 aa13.54□□□□□ -0.24
SGMS1-210ENST00000619438 FAM236AA0A1B0GUQ0 79 aa13.53□□□□□ -0.24
SGMS1-210ENST00000619438 FAM236BA0A1B0GV22 79 aa13.53□□□□□ -0.24
SGMS1-210ENST00000619438 CIRBP-AS1Q8TBR5 109 aa13.53□□□□□ -0.24
SGMS1-210ENST00000619438 UBL5Q9BZL1 73 aa13.53□□□□□ -0.24
SGMS1-210ENST00000619438 FAT1Q14517 4588 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms