RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ATP5EP2Q5VTU8 51 aa11.39□□□□□ -0.59
CNOT3-209ENST00000617930 LAMTOR3Q9UHA4 124 aa11.38□□□□□ -0.59
CNOT3-209ENST00000617930 SMIM20Q8N5G0 67 aa11.38□□□□□ -0.59
CNOT3-209ENST00000617930 TRAV23DV6A0A075B6W5 121 aa11.37□□□□□ -0.59
CNOT3-209ENST00000617930 RBM3P98179 157 aaKnown RBP11.37□□□□□ -0.59
CNOT3-209ENST00000617930 F8WDY8 70 aa11.36□□□□□ -0.59
CNOT3-209ENST00000617930 DIRC1Q969H9 104 aa11.36□□□□□ -0.59
CNOT3-209ENST00000617930 UBL5Q9BZL1 73 aa11.36□□□□□ -0.59
CNOT3-209ENST00000617930 KMT2AQ03164 3969 aa11.36□□□□□ -0.59
CNOT3-209ENST00000617930 Q6ZQY7 126 aa11.35□□□□□ -0.59
CNOT3-209ENST00000617930 UBE2DNLQ8IWF7 75 aa11.35□□□□□ -0.59
CNOT3-209ENST00000617930 SERTAD4-AS1Q5TG53 156 aa11.33□□□□□ -0.6
CNOT3-209ENST00000617930 Q6ZQT0 140 aa11.33□□□□□ -0.6
CNOT3-209ENST00000617930 H3BQ85 93 aa11.33□□□□□ -0.6
CNOT3-209ENST00000617930 CRYGAP11844 174 aa11.33□□□□□ -0.6
CNOT3-209ENST00000617930 DNAH2Q9P225 4427 aa11.32□□□□□ -0.6
CNOT3-209ENST00000617930 LOC110117498A0A087WWA1 95 aa11.32□□□□□ -0.6
CNOT3-209ENST00000617930 RMI2Q96E14 147 aa11.32□□□□□ -0.6
CNOT3-209ENST00000617930 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
CNOT3-209ENST00000617930 KRTAP7-1Q8IUC3 87 aa11.31□□□□□ -0.6
CNOT3-209ENST00000617930 SERP2Q8N6R1 65 aa11.31□□□□□ -0.6
CNOT3-209ENST00000617930 DSCR8Q96T75 97 aa11.31□□□□□ -0.6
CNOT3-209ENST00000617930 ZNF73O43830 326 aaPredicted RBP11.31□□□□□ -0.6
CNOT3-209ENST00000617930 COX7BP24311 80 aa11.31□□□□□ -0.6
CNOT3-209ENST00000617930 M0R378 163 aa11.3□□□□□ -0.6
CNOT3-209ENST00000617930 FAM168BA1KXE4 195 aa11.3□□□□□ -0.6
CNOT3-209ENST00000617930 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.27□□□□□ -0.61
CNOT3-209ENST00000617930 FAM19A1Q7Z5A9 133 aa11.27□□□□□ -0.61
CNOT3-209ENST00000617930 GHRHP01286 108 aa11.26□□□□□ -0.61
CNOT3-209ENST00000617930 ELOF1P60002 83 aaKnown RBP11.26□□□□□ -0.61
CNOT3-209ENST00000617930 PDE6GP18545 87 aa11.26□□□□□ -0.61
CNOT3-209ENST00000617930 C7orf33Q8WU49 177 aa11.25□□□□□ -0.61
CNOT3-209ENST00000617930 ALMS1Q8TCU4 4167 aa11.25□□□□□ -0.61
CNOT3-209ENST00000617930 TRBV7-6A0A0J9YX20 115 aa11.25□□□□□ -0.61
CNOT3-209ENST00000617930 NBDYA0A0U1RRE5 68 aa11.25□□□□□ -0.61
CNOT3-209ENST00000617930 M0R2N4 97 aa11.25□□□□□ -0.61
CNOT3-209ENST00000617930 HYDINQ4G0P3 5121 aa11.25□□□□□ -0.61
CNOT3-209ENST00000617930 WWC2-AS2Q96NR7 200 aa11.24□□□□□ -0.61
CNOT3-209ENST00000617930 DNAH6Q9C0G6 4158 aa11.24□□□□□ -0.61
CNOT3-209ENST00000617930 PLA2G2DQ9UNK4 145 aa11.22□□□□□ -0.61
CNOT3-209ENST00000617930 Q6ZVQ6 151 aa11.21□□□□□ -0.61
CNOT3-209ENST00000617930 HAMPP81172 84 aa11.21□□□□□ -0.62
CNOT3-209ENST00000617930 Q6ZRN7 208 aaPredicted RBP11.21□□□□□ -0.62
CNOT3-209ENST00000617930 CYSTM1Q9H1C7 97 aa11.21□□□□□ -0.62
CNOT3-209ENST00000617930 LINC01547P58512 204 aaPredicted RBP11.2□□□□□ -0.62
CNOT3-209ENST00000617930 KCNQ1DNQ9H478 68 aa11.2□□□□□ -0.62
CNOT3-209ENST00000617930 LINC00528Q8N1L1 170 aa11.19□□□□□ -0.62
CNOT3-209ENST00000617930 NKAPP1Q8N9T2 125 aa11.19□□□□□ -0.62
CNOT3-209ENST00000617930 IGLV5-37A0A075B6J1 123 aa11.18□□□□□ -0.62
CNOT3-209ENST00000617930 TRBV7-4A0A0J9YYF1 115 aa11.18□□□□□ -0.62
CNOT3-209ENST00000617930 RPL37AP8A6NKH3 93 aa11.18□□□□□ -0.62
CNOT3-209ENST00000617930 PSCAO43653 123 aa11.18□□□□□ -0.62
CNOT3-209ENST00000617930 LOC107984640A0A0U1RRK4 108 aa11.18□□□□□ -0.62
CNOT3-209ENST00000617930 TMEM258P61165 79 aa11.18□□□□□ -0.62
CNOT3-209ENST00000617930 CNBPP62633 177 aaKnown RBP11.18□□□□□ -0.62
CNOT3-209ENST00000617930 LRCOL1A6NCL2 159 aa11.17□□□□□ -0.62
CNOT3-209ENST00000617930 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.16□□□□□ -0.62
CNOT3-209ENST00000617930 J3KT08 172 aa11.16□□□□□ -0.62
CNOT3-209ENST00000617930 DNAH17Q9UFH2 4485 aa11.16□□□□□ -0.62
CNOT3-209ENST00000617930 IGLV1-50A0A075B6I6 118 aa11.16□□□□□ -0.62
CNOT3-209ENST00000617930 A0A096LNI7 61 aa11.16□□□□□ -0.62
CNOT3-209ENST00000617930 Q6ZR54 194 aa11.16□□□□□ -0.62
CNOT3-209ENST00000617930 FAM19A5Q7Z5A7 132 aaPredicted RBP11.16□□□□□ -0.62
CNOT3-209ENST00000617930 KRTAP4-16G5E9R7 235 aaPredicted RBP11.14□□□□□ -0.63
CNOT3-209ENST00000617930 CXCL6P80162 114 aa11.14□□□□□ -0.63
CNOT3-209ENST00000617930 SACSQ9NZJ4 4579 aa11.14□□□□□ -0.63
CNOT3-209ENST00000617930 LINC00476Q8WZB0 136 aa11.13□□□□□ -0.63
CNOT3-209ENST00000617930 A0A1W2PNN7 141 aa11.12□□□□□ -0.63
CNOT3-209ENST00000617930 LY6G6CO95867 125 aa11.12□□□□□ -0.63
CNOT3-209ENST00000617930 IGKV2-24A0A0C4DH68 120 aa11.11□□□□□ -0.63
CNOT3-209ENST00000617930 SPRR1AP35321 89 aa11.11□□□□□ -0.63
CNOT3-209ENST00000617930 MRPL55Q7Z7F7 128 aaKnown RBP11.11□□□□□ -0.63
CNOT3-209ENST00000617930 FRAS1Q86XX4 4008 aa11.11□□□□□ -0.63
CNOT3-209ENST00000617930 C16orf90A8MZG2 172 aa11.1□□□□□ -0.63
CNOT3-209ENST00000617930 BCE1O60756 84 aa11.1□□□□□ -0.63
CNOT3-209ENST00000617930 SCXQ7RTU7 201 aa11.09□□□□□ -0.63
CNOT3-209ENST00000617930 Q9BRP9 147 aa11.09□□□□□ -0.63
CNOT3-209ENST00000617930 CHTF8P0CG12 524 aa11.08□□□□□ -0.64
CNOT3-209ENST00000617930 C20orf197Q8N268 126 aa11.08□□□□□ -0.64
CNOT3-209ENST00000617930 HECTD4Q9Y4D8 3996 aa11.08□□□□□ -0.64
CNOT3-209ENST00000617930 TRAV7A0A075B6U4 112 aa11.08□□□□□ -0.64
CNOT3-209ENST00000617930 DNAH11Q96DT5 4516 aa11.07□□□□□ -0.64
CNOT3-209ENST00000617930 C3orf84H3BNL1 204 aa11.06□□□□□ -0.64
CNOT3-209ENST00000617930 PRYO14603 147 aa11.06□□□□□ -0.64
CNOT3-209ENST00000617930 RPS28P62857 69 aaKnown RBP11.06□□□□□ -0.64
CNOT3-209ENST00000617930 Q6ZRX8 168 aa11.06□□□□□ -0.64
CNOT3-209ENST00000617930 C9orf163Q8N9P6 203 aa11.05□□□□□ -0.64
CNOT3-209ENST00000617930 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
CNOT3-209ENST00000617930 C14orf177Q52M58 125 aa11.04□□□□□ -0.64
CNOT3-209ENST00000617930 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
CNOT3-209ENST00000617930 DEFB105AQ8NG35 78 aa11.04□□□□□ -0.64
CNOT3-209ENST00000617930 FAT2Q9NYQ8 4349 aa11.04□□□□□ -0.64
CNOT3-209ENST00000617930 PANO1I0J062 215 aa11.04□□□□□ -0.64
CNOT3-209ENST00000617930 FUSP35637 526 aaKnown RBP eCLIP11.03□□□□□ -0.64
CNOT3-209ENST00000617930 ERC2-IT1O76042 136 aa11.02□□□□□ -0.65
CNOT3-209ENST00000617930 Q8N377 158 aa11.01□□□□□ -0.65
CNOT3-209ENST00000617930 A0A087WTM6 91 aa11□□□□□ -0.65
CNOT3-209ENST00000617930 ST20-AS1Q8NBB2 130 aa11□□□□□ -0.65
CNOT3-209ENST00000617930 DHRS4-AS1Q9P1J3 65 aa11□□□□□ -0.65
CNOT3-209ENST00000617930 NREPQ16612 68 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms