RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 TMEM258P61165 79 aa7.78□□□□□ -1.16
C11orf54-215ENST00000617482 TENM3Q9P273 2699 aa7.77□□□□□ -1.17
C11orf54-215ENST00000617482 TRBV7-4A0A0J9YYF1 115 aa7.77□□□□□ -1.17
C11orf54-215ENST00000617482 SCXQ7RTU7 201 aa7.77□□□□□ -1.17
C11orf54-215ENST00000617482 F8P00451 2351 aa7.76□□□□□ -1.17
C11orf54-215ENST00000617482 FBN1P35555 2871 aaKnown RBP7.76□□□□□ -1.17
C11orf54-215ENST00000617482 DEFB131BA0A096LNP1 70 aa7.76□□□□□ -1.17
C11orf54-215ENST00000617482 TRBV7-6A0A0J9YX20 115 aa7.76□□□□□ -1.17
C11orf54-215ENST00000617482 STAB1Q9NY15 2570 aa7.75□□□□□ -1.17
C11orf54-215ENST00000617482 PMAIP1Q13794 54 aa7.75□□□□□ -1.17
C11orf54-215ENST00000617482 C20orf197Q8N268 126 aa7.75□□□□□ -1.17
C11orf54-215ENST00000617482 TRAV10A0A0B4J240 114 aa7.74□□□□□ -1.17
C11orf54-215ENST00000617482 SYCNQ0VAF6 134 aa7.74□□□□□ -1.17
C11orf54-215ENST00000617482 LINC01556Q5JQF7 62 aa7.73□□□□□ -1.17
C11orf54-215ENST00000617482 C11orf45Q8TAV5 145 aa7.73□□□□□ -1.17
C11orf54-215ENST00000617482 CXCL6P80162 114 aa7.72□□□□□ -1.17
C11orf54-215ENST00000617482 SERTAD4-AS1Q5TG53 156 aa7.72□□□□□ -1.17
C11orf54-215ENST00000617482 DEFB105AQ8NG35 78 aa7.72□□□□□ -1.17
C11orf54-215ENST00000617482 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.17
C11orf54-215ENST00000617482 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.17
C11orf54-215ENST00000617482 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.17
C11orf54-215ENST00000617482 A0A0U1RQV1 116 aa7.71□□□□□ -1.18
C11orf54-215ENST00000617482 FLNBO75369 2602 aaKnown RBP7.71□□□□□ -1.18
C11orf54-215ENST00000617482 TRAV7A0A075B6U4 112 aa7.7□□□□□ -1.18
C11orf54-215ENST00000617482 KRTAP24-1Q3LI83 254 aa7.7□□□□□ -1.18
C11orf54-215ENST00000617482 MDFIQ99750 246 aa7.7□□□□□ -1.18
C11orf54-215ENST00000617482 RPL37AP8A6NKH3 93 aa7.69□□□□□ -1.18
C11orf54-215ENST00000617482 C7orf33Q8WU49 177 aa7.69□□□□□ -1.18
C11orf54-215ENST00000617482 CMYA5Q8N3K9 4069 aa7.69□□□□□ -1.18
C11orf54-215ENST00000617482 KCNQ1DNQ9H478 68 aa7.69□□□□□ -1.18
C11orf54-215ENST00000617482 FAM168BA1KXE4 195 aa7.68□□□□□ -1.18
C11orf54-215ENST00000617482 PRB2P02812 416 aaPredicted RBP7.68□□□□□ -1.18
C11orf54-215ENST00000617482 CASC10Q5T4H9 136 aa7.68□□□□□ -1.18
C11orf54-215ENST00000617482 Q8N9L7 120 aa7.68□□□□□ -1.18
C11orf54-215ENST00000617482 NOTCH1P46531 2555 aa7.67□□□□□ -1.18
C11orf54-215ENST00000617482 SNURFQ9Y675 71 aa7.67□□□□□ -1.18
C11orf54-215ENST00000617482 C3orf84H3BNL1 204 aa7.67□□□□□ -1.18
C11orf54-215ENST00000617482 H3BS24 57 aa7.67□□□□□ -1.18
C11orf54-215ENST00000617482 DNAH10OSP0CZ25 163 aa7.67□□□□□ -1.18
C11orf54-215ENST00000617482 Q8N377 158 aa7.67□□□□□ -1.18
C11orf54-215ENST00000617482 MAST4O15021 2626 aa7.66□□□□□ -1.18
C11orf54-215ENST00000617482 BCE1O60756 84 aa7.66□□□□□ -1.18
C11orf54-215ENST00000617482 NREPQ16612 68 aa7.65□□□□□ -1.18
C11orf54-215ENST00000617482 TM2D3Q9BRN9 247 aa7.65□□□□□ -1.18
C11orf54-215ENST00000617482 LINC00588Q9Y4M8 146 aa7.64□□□□□ -1.19
C11orf54-215ENST00000617482 H7BZZ5 65 aa7.64□□□□□ -1.19
C11orf54-215ENST00000617482 RMI2Q96E14 147 aa7.63□□□□□ -1.19
C11orf54-215ENST00000617482 BRK1Q8WUW1 75 aa7.63□□□□□ -1.19
C11orf54-215ENST00000617482 Q9BRP9 147 aa7.63□□□□□ -1.19
C11orf54-215ENST00000617482 EPM2AB3EWF7 344 aa7.62□□□□□ -1.19
C11orf54-215ENST00000617482 BPY2O14599 106 aa7.62□□□□□ -1.19
C11orf54-215ENST00000617482 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
C11orf54-215ENST00000617482 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
C11orf54-215ENST00000617482 Q6ZRX8 168 aa7.62□□□□□ -1.19
C11orf54-215ENST00000617482 IGLV1-50A0A075B6I6 118 aa7.61□□□□□ -1.19
C11orf54-215ENST00000617482 MRPL55Q7Z7F7 128 aaKnown RBP7.61□□□□□ -1.19
C11orf54-215ENST00000617482 KRTAP7-1Q8IUC3 87 aa7.61□□□□□ -1.19
C11orf54-215ENST00000617482 ST20-AS1Q8NBB2 130 aa7.61□□□□□ -1.19
C11orf54-215ENST00000617482 ETDCA0A1B0GVM5 59 aa7.61□□□□□ -1.19
C11orf54-215ENST00000617482 KLKP1Q107X0 134 aa7.61□□□□□ -1.19
C11orf54-215ENST00000617482 IGKV4-1P06312 121 aa7.6□□□□□ -1.19
C11orf54-215ENST00000617482 DHRS4-AS1Q9P1J3 65 aa7.6□□□□□ -1.19
C11orf54-215ENST00000617482 IGLV5-48A0A075B6I7 105 aa7.6□□□□□ -1.19
C11orf54-215ENST00000617482 KRTAP4-16G5E9R7 235 aaPredicted RBP7.6□□□□□ -1.19
C11orf54-215ENST00000617482 PLA2G2DQ9UNK4 145 aa7.59□□□□□ -1.19
C11orf54-215ENST00000617482 F8WEM9 126 aa7.59□□□□□ -1.19
C11orf54-215ENST00000617482 ERC2-IT1O76042 136 aa7.58□□□□□ -1.2
C11orf54-215ENST00000617482 A0A1W2PNM2 257 aa7.57□□□□□ -1.2
C11orf54-215ENST00000617482 PRYO14603 147 aa7.57□□□□□ -1.2
C11orf54-215ENST00000617482 COL6A5A8TX70 2615 aa7.57□□□□□ -1.2
C11orf54-215ENST00000617482 SPRR1AP35321 89 aa7.57□□□□□ -1.2
C11orf54-215ENST00000617482 FUSP35637 526 aaKnown RBP eCLIP7.57□□□□□ -1.2
C11orf54-215ENST00000617482 C1orf137Q5JT78 98 aa7.57□□□□□ -1.2
C11orf54-215ENST00000617482 NBEAL1Q6ZS30 2694 aa7.56□□□□□ -1.2
C11orf54-215ENST00000617482 DNAH3Q8TD57 4116 aa7.56□□□□□ -1.2
C11orf54-215ENST00000617482 IGLV5-37A0A075B6J1 123 aa7.56□□□□□ -1.2
C11orf54-215ENST00000617482 UBE2BP63146 152 aa7.56□□□□□ -1.2
C11orf54-215ENST00000617482 BAHCC1Q9P281 2608 aa7.55□□□□□ -1.2
C11orf54-215ENST00000617482 DNAH1Q9P2D7 4330 aa7.55□□□□□ -1.2
C11orf54-215ENST00000617482 SMIM26A0A096LP01 95 aa7.54□□□□□ -1.2
C11orf54-215ENST00000617482 SERP1Q9Y6X1 66 aa7.54□□□□□ -1.2
C11orf54-215ENST00000617482 TMEM254Q8TBM7 123 aa7.54□□□□□ -1.2
C11orf54-215ENST00000617482 PRR15Q8IV56 129 aa7.52□□□□□ -1.2
C11orf54-215ENST00000617482 OCR1Q9BZK8 76 aa7.52□□□□□ -1.2
C11orf54-215ENST00000617482 LYSTQ99698 3801 aa7.52□□□□□ -1.21
C11orf54-215ENST00000617482 A0A0G2JQZ4 141 aa7.51□□□□□ -1.21
C11orf54-215ENST00000617482 A0A1W2PNN7 141 aa7.51□□□□□ -1.21
C11orf54-215ENST00000617482 REG3GQ6UW15 175 aa7.51□□□□□ -1.21
C11orf54-215ENST00000617482 Q8NBF4 154 aa7.51□□□□□ -1.21
C11orf54-215ENST00000617482 IGKV2-24A0A0C4DH68 120 aa7.51□□□□□ -1.21
C11orf54-215ENST00000617482 HUWE1Q7Z6Z7 4374 aaKnown RBP7.51□□□□□ -1.21
C11orf54-215ENST00000617482 NDUFC1O43677 76 aa7.5□□□□□ -1.21
C11orf54-215ENST00000617482 DNAH10Q8IVF4 4471 aa7.49□□□□□ -1.21
C11orf54-215ENST00000617482 K7EIL1 84 aa7.49□□□□□ -1.21
C11orf54-215ENST00000617482 SMIM29Q86T20 159 aa7.49□□□□□ -1.21
C11orf54-215ENST00000617482 PRR26Q8N8Z3 221 aa7.49□□□□□ -1.21
C11orf54-215ENST00000617482 FAM30AQ9NZY2 134 aa7.49□□□□□ -1.21
C11orf54-215ENST00000617482 FP248Q71RG6 208 aaPredicted RBP7.49□□□□□ -1.21
C11orf54-215ENST00000617482 A0A1B0GW54 56 aa7.48□□□□□ -1.21
C11orf54-215ENST00000617482 SPRR4Q96PI1 79 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms