RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 PSCAO43653 123 aa13.36□□□□□ -0.27
CNTNAP3B-212ENST00000617422 ATP5EP2Q5VTU8 51 aa13.36□□□□□ -0.27
CNTNAP3B-212ENST00000617422 DNAH2Q9P225 4427 aa13.36□□□□□ -0.27
CNTNAP3B-212ENST00000617422 VPREB1P12018 145 aa13.35□□□□□ -0.27
CNTNAP3B-212ENST00000617422 Q6ZRN7 208 aaPredicted RBP13.35□□□□□ -0.27
CNTNAP3B-212ENST00000617422 C6orf99Q4VX62 202 aa13.34□□□□□ -0.27
CNTNAP3B-212ENST00000617422 TLX1NBP0CAT3 122 aa13.33□□□□□ -0.28
CNTNAP3B-212ENST00000617422 IGLV6-57P01721 117 aa13.32□□□□□ -0.28
CNTNAP3B-212ENST00000617422 LINC00575Q6W349 94 aa13.32□□□□□ -0.28
CNTNAP3B-212ENST00000617422 LRCOL1A6NCL2 159 aa13.31□□□□□ -0.28
CNTNAP3B-212ENST00000617422 SERP2Q8N6R1 65 aa13.31□□□□□ -0.28
CNTNAP3B-212ENST00000617422 TRBV10-3A0A0K0K1G6 114 aa13.3□□□□□ -0.28
CNTNAP3B-212ENST00000617422 SERTAD4-AS1Q5TG53 156 aa13.3□□□□□ -0.28
CNTNAP3B-212ENST00000617422 A0A087WVE0 104 aa13.28□□□□□ -0.28
CNTNAP3B-212ENST00000617422 hADV29S1A0JD25 119 aa13.28□□□□□ -0.28
CNTNAP3B-212ENST00000617422 H3BQ85 93 aa13.28□□□□□ -0.28
CNTNAP3B-212ENST00000617422 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.27□□□□□ -0.28
CNTNAP3B-212ENST00000617422 FAM168BA1KXE4 195 aa13.27□□□□□ -0.28
CNTNAP3B-212ENST00000617422 CNBPP62633 177 aaKnown RBP13.27□□□□□ -0.29
CNTNAP3B-212ENST00000617422 KRTAP7-1Q8IUC3 87 aa13.27□□□□□ -0.29
CNTNAP3B-212ENST00000617422 UBL5Q9BZL1 73 aa13.27□□□□□ -0.29
CNTNAP3B-212ENST00000617422 Q6ZR54 194 aa13.26□□□□□ -0.29
CNTNAP3B-212ENST00000617422 WWC2-AS2Q96NR7 200 aa13.26□□□□□ -0.29
CNTNAP3B-212ENST00000617422 RBM3P98179 157 aaKnown RBP13.24□□□□□ -0.29
CNTNAP3B-212ENST00000617422 LOC110117498A0A087WWA1 95 aa13.24□□□□□ -0.29
CNTNAP3B-212ENST00000617422 DNAH6Q9C0G6 4158 aa13.23□□□□□ -0.29
CNTNAP3B-212ENST00000617422 M0R378 163 aa13.23□□□□□ -0.29
CNTNAP3B-212ENST00000617422 LOC107984640A0A0U1RRK4 108 aa13.22□□□□□ -0.29
CNTNAP3B-212ENST00000617422 Q6ZQT0 140 aa13.21□□□□□ -0.29
CNTNAP3B-212ENST00000617422 HECTD4Q9Y4D8 3996 aa13.21□□□□□ -0.29
CNTNAP3B-212ENST00000617422 TRAV23DV6A0A075B6W5 121 aa13.2□□□□□ -0.3
CNTNAP3B-212ENST00000617422 ALMS1Q8TCU4 4167 aa13.2□□□□□ -0.3
CNTNAP3B-212ENST00000617422 A0A096LNI7 61 aa13.2□□□□□ -0.3
CNTNAP3B-212ENST00000617422 C14orf177Q52M58 125 aa13.2□□□□□ -0.3
CNTNAP3B-212ENST00000617422 LAMTOR3Q9UHA4 124 aa13.2□□□□□ -0.3
CNTNAP3B-212ENST00000617422 PLA2G2DQ9UNK4 145 aa13.2□□□□□ -0.3
CNTNAP3B-212ENST00000617422 LY6G6CO95867 125 aa13.19□□□□□ -0.3
CNTNAP3B-212ENST00000617422 PDE6GP18545 87 aa13.19□□□□□ -0.3
CNTNAP3B-212ENST00000617422 C7orf33Q8WU49 177 aa13.19□□□□□ -0.3
CNTNAP3B-212ENST00000617422 J3KT08 172 aa13.18□□□□□ -0.3
CNTNAP3B-212ENST00000617422 TMEM258P61165 79 aa13.18□□□□□ -0.3
CNTNAP3B-212ENST00000617422 HYDINQ4G0P3 5121 aa13.18□□□□□ -0.3
CNTNAP3B-212ENST00000617422 RPS28P62857 69 aaKnown RBP13.17□□□□□ -0.3
CNTNAP3B-212ENST00000617422 GHRHP01286 108 aa13.17□□□□□ -0.3
CNTNAP3B-212ENST00000617422 NKAPP1Q8N9T2 125 aa13.17□□□□□ -0.3
CNTNAP3B-212ENST00000617422 DNAH17Q9UFH2 4485 aa13.16□□□□□ -0.3
CNTNAP3B-212ENST00000617422 ZNF73O43830 326 aaPredicted RBP13.16□□□□□ -0.3
CNTNAP3B-212ENST00000617422 LINC00476Q8WZB0 136 aa13.16□□□□□ -0.3
CNTNAP3B-212ENST00000617422 DIRC1Q969H9 104 aa13.16□□□□□ -0.3
CNTNAP3B-212ENST00000617422 DSCR8Q96T75 97 aa13.16□□□□□ -0.3
CNTNAP3B-212ENST00000617422 FAM19A5Q7Z5A7 132 aaPredicted RBP13.15□□□□□ -0.3
CNTNAP3B-212ENST00000617422 IGLV5-37A0A075B6J1 123 aa13.15□□□□□ -0.3
CNTNAP3B-212ENST00000617422 IGKV2-24A0A0C4DH68 120 aa13.15□□□□□ -0.3
CNTNAP3B-212ENST00000617422 Q6ZQY7 126 aa13.14□□□□□ -0.31
CNTNAP3B-212ENST00000617422 C16orf90A8MZG2 172 aa13.14□□□□□ -0.31
CNTNAP3B-212ENST00000617422 FAM19A1Q7Z5A9 133 aa13.14□□□□□ -0.31
CNTNAP3B-212ENST00000617422 A0A087WTM6 91 aa13.13□□□□□ -0.31
CNTNAP3B-212ENST00000617422 FUSP35637 526 aaKnown RBP eCLIP13.13□□□□□ -0.31
CNTNAP3B-212ENST00000617422 C9orf163Q8N9P6 203 aa13.13□□□□□ -0.31
CNTNAP3B-212ENST00000617422 FRAS1Q86XX4 4008 aa13.13□□□□□ -0.31
CNTNAP3B-212ENST00000617422 RPL37AP8A6NKH3 93 aa13.13□□□□□ -0.31
CNTNAP3B-212ENST00000617422 BCE1O60756 84 aa13.13□□□□□ -0.31
CNTNAP3B-212ENST00000617422 CHTF8P0CG12 524 aa13.13□□□□□ -0.31
CNTNAP3B-212ENST00000617422 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.13□□□□□ -0.31
CNTNAP3B-212ENST00000617422 CYSTM1Q9H1C7 97 aa13.13□□□□□ -0.31
CNTNAP3B-212ENST00000617422 TRBV7-6A0A0J9YX20 115 aa13.12□□□□□ -0.31
CNTNAP3B-212ENST00000617422 A0A1W2PNN7 141 aa13.11□□□□□ -0.31
CNTNAP3B-212ENST00000617422 KCNQ1DNQ9H478 68 aa13.1□□□□□ -0.31
CNTNAP3B-212ENST00000617422 COX7BP24311 80 aa13.1□□□□□ -0.31
CNTNAP3B-212ENST00000617422 ELOF1P60002 83 aaKnown RBP13.09□□□□□ -0.31
CNTNAP3B-212ENST00000617422 IGLV1-50A0A075B6I6 118 aa13.08□□□□□ -0.32
CNTNAP3B-212ENST00000617422 LINC01547P58512 204 aaPredicted RBP13.07□□□□□ -0.32
CNTNAP3B-212ENST00000617422 C1orf134Q5TEV5 83 aa13.07□□□□□ -0.32
CNTNAP3B-212ENST00000617422 Q6ZVQ6 151 aa13.07□□□□□ -0.32
CNTNAP3B-212ENST00000617422 MRPL55Q7Z7F7 128 aaKnown RBP13.07□□□□□ -0.32
CNTNAP3B-212ENST00000617422 PANO1I0J062 215 aa13.07□□□□□ -0.32
CNTNAP3B-212ENST00000617422 C3orf84H3BNL1 204 aa13.06□□□□□ -0.32
CNTNAP3B-212ENST00000617422 CXCL6P80162 114 aa13.05□□□□□ -0.32
CNTNAP3B-212ENST00000617422 LINC00528Q8N1L1 170 aa13.05□□□□□ -0.32
CNTNAP3B-212ENST00000617422 TRBV7-4A0A0J9YYF1 115 aa13.04□□□□□ -0.32
CNTNAP3B-212ENST00000617422 DPH3Q96FX2 82 aa13.04□□□□□ -0.32
CNTNAP3B-212ENST00000617422 HAMPP81172 84 aa13.03□□□□□ -0.32
CNTNAP3B-212ENST00000617422 DNAH11Q96DT5 4516 aa13.03□□□□□ -0.32
CNTNAP3B-212ENST00000617422 KRTAP4-16G5E9R7 235 aaPredicted RBP13.03□□□□□ -0.32
CNTNAP3B-212ENST00000617422 TRAV7A0A075B6U4 112 aa13.01□□□□□ -0.33
CNTNAP3B-212ENST00000617422 SPRR1AP35321 89 aa13□□□□□ -0.33
CNTNAP3B-212ENST00000617422 SACSQ9NZJ4 4579 aa13□□□□□ -0.33
CNTNAP3B-212ENST00000617422 PRYO14603 147 aa12.99□□□□□ -0.33
CNTNAP3B-212ENST00000617422 TNP2Q05952 138 aa12.99□□□□□ -0.33
CNTNAP3B-212ENST00000617422 FAT2Q9NYQ8 4349 aa12.99□□□□□ -0.33
CNTNAP3B-212ENST00000617422 KRTAP11-1Q8IUC1 163 aa12.98□□□□□ -0.33
CNTNAP3B-212ENST00000617422 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.98□□□□□ -0.33
CNTNAP3B-212ENST00000617422 RTL8CO15255 209 aa12.98□□□□□ -0.33
CNTNAP3B-212ENST00000617422 PHF5AQ7RTV0 110 aaKnown RBP12.97□□□□□ -0.33
CNTNAP3B-212ENST00000617422 C20orf197Q8N268 126 aa12.96□□□□□ -0.33
CNTNAP3B-212ENST00000617422 DNAH5Q8TE73 4624 aa12.96□□□□□ -0.33
CNTNAP3B-212ENST00000617422 Q9BRP9 147 aa12.95□□□□□ -0.34
CNTNAP3B-212ENST00000617422 Q6ZRX8 168 aa12.94□□□□□ -0.34
CNTNAP3B-212ENST00000617422 SPACA4Q8TDM5 124 aa12.93□□□□□ -0.34
CNTNAP3B-212ENST00000617422 PKD1P98161 4303 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms