RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 A8MUN3 132 aa12.23□□□□□ -0.45
GABPB1-212ENST00000615671 A0A1B0GVX0 72 aa12.22□□□□□ -0.45
GABPB1-212ENST00000615671 IGLV7-43P04211 117 aa12.22□□□□□ -0.45
GABPB1-212ENST00000615671 CRIPTQ9P021 101 aa12.22□□□□□ -0.45
GABPB1-212ENST00000615671 PSORS1C2Q9UIG4 136 aa12.22□□□□□ -0.45
GABPB1-212ENST00000615671 Q8N1X5 172 aa12.21□□□□□ -0.45
GABPB1-212ENST00000615671 EIF4EBP3O60516 100 aaPredicted RBP12.2□□□□□ -0.46
GABPB1-212ENST00000615671 Q8N377 158 aa12.18□□□□□ -0.46
GABPB1-212ENST00000615671 PRR15Q8IV56 129 aa12.18□□□□□ -0.46
GABPB1-212ENST00000615671 UQCR11O14957 56 aa12.15□□□□□ -0.46
GABPB1-212ENST00000615671 MIR22HGQ0VDD5 57 aa12.15□□□□□ -0.46
GABPB1-212ENST00000615671 GIG44P09565 113 aaPredicted RBP12.14□□□□□ -0.47
GABPB1-212ENST00000615671 ZNF462Q96JM2 2506 aa12.14□□□□□ -0.47
GABPB1-212ENST00000615671 ZNF575Q86XF7 245 aa12.14□□□□□ -0.47
GABPB1-212ENST00000615671 IGLV5-48A0A075B6I7 105 aa12.14□□□□□ -0.47
GABPB1-212ENST00000615671 M0R2T5 61 aa12.12□□□□□ -0.47
GABPB1-212ENST00000615671 ERC2-IT1O76042 136 aa12.12□□□□□ -0.47
GABPB1-212ENST00000615671 SETD2Q9BYW2 2564 aaPredicted RBP12.12□□□□□ -0.47
GABPB1-212ENST00000615671 LINC00336Q6ZUF6 198 aa12.11□□□□□ -0.47
GABPB1-212ENST00000615671 USP9XQ93008 2570 aaPredicted RBP12.11□□□□□ -0.47
GABPB1-212ENST00000615671 C9orf163Q8N9P6 203 aa12.11□□□□□ -0.47
GABPB1-212ENST00000615671 PRR34Q9NV39 138 aa12.11□□□□□ -0.47
GABPB1-212ENST00000615671 ANKRD17O75179 2603 aaKnown RBP12.1□□□□□ -0.47
GABPB1-212ENST00000615671 ANKRD11Q6UB99 2663 aaPredicted RBP12.07□□□□□ -0.48
GABPB1-212ENST00000615671 A0A096LNT2 108 aa12.07□□□□□ -0.48
GABPB1-212ENST00000615671 TNP2Q05952 138 aa12.06□□□□□ -0.48
GABPB1-212ENST00000615671 SPRR4Q96PI1 79 aa12.05□□□□□ -0.48
GABPB1-212ENST00000615671 Q6ZSA8 131 aa12.03□□□□□ -0.48
GABPB1-212ENST00000615671 LINC00612Q8N6U2 182 aa12□□□□□ -0.49
GABPB1-212ENST00000615671 TLX1NBP0CAT3 122 aa11.98□□□□□ -0.49
GABPB1-212ENST00000615671 PRR26Q8N8Z3 221 aa11.97□□□□□ -0.49
GABPB1-212ENST00000615671 PKD1L2Q7Z442 2459 aa11.97□□□□□ -0.49
GABPB1-212ENST00000615671 KLK9Q2XQG4 91 aa11.96□□□□□ -0.49
GABPB1-212ENST00000615671 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
GABPB1-212ENST00000615671 RPS28P62857 69 aaKnown RBP11.95□□□□□ -0.5
GABPB1-212ENST00000615671 CHD8Q9HCK8 2581 aa11.95□□□□□ -0.5
GABPB1-212ENST00000615671 POLQO75417 2590 aa11.95□□□□□ -0.5
GABPB1-212ENST00000615671 SPTBN4Q9H254 2564 aa11.95□□□□□ -0.5
GABPB1-212ENST00000615671 PLA2G2DQ9UNK4 145 aa11.94□□□□□ -0.5
GABPB1-212ENST00000615671 IGLV7-46A0A075B6I9 117 aa11.94□□□□□ -0.5
GABPB1-212ENST00000615671 FAM104AQ969W3 186 aa11.94□□□□□ -0.5
GABPB1-212ENST00000615671 ACANP16112 2415 aa11.92□□□□□ -0.5
GABPB1-212ENST00000615671 CEP295Q9C0D2 2601 aa11.9□□□□□ -0.5
GABPB1-212ENST00000615671 CNBPP62633 177 aaKnown RBP11.9□□□□□ -0.5
GABPB1-212ENST00000615671 CYP4F30PQ9H0H9 118 aa11.9□□□□□ -0.5
GABPB1-212ENST00000615671 CDC42SE1Q9NRR8 79 aa11.9□□□□□ -0.5
GABPB1-212ENST00000615671 MTORP42345 2549 aa11.89□□□□□ -0.51
GABPB1-212ENST00000615671 A0A1W2PNM2 257 aa11.88□□□□□ -0.51
GABPB1-212ENST00000615671 F8P00451 2351 aa11.88□□□□□ -0.51
GABPB1-212ENST00000615671 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.87□□□□□ -0.51
GABPB1-212ENST00000615671 KRTAP1-1Q07627 177 aa11.87□□□□□ -0.51
GABPB1-212ENST00000615671 USP9YO00507 2555 aaPredicted RBP11.86□□□□□ -0.51
GABPB1-212ENST00000615671 CAMK2N1Q7Z7J9 78 aa11.86□□□□□ -0.51
GABPB1-212ENST00000615671 FASNP49327 2511 aaKnown RBP11.77□□□□□ -0.53
GABPB1-212ENST00000615671 H7BZZ5 65 aa11.73□□□□□ -0.53
GABPB1-212ENST00000615671 KLKP1Q107X0 134 aa11.72□□□□□ -0.53
GABPB1-212ENST00000615671 UTRNP46939 3433 aa11.7□□□□□ -0.54
GABPB1-212ENST00000615671 CD164Q04900 197 aa11.7□□□□□ -0.54
GABPB1-212ENST00000615671 LUZP6Q538Z0 58 aa11.65□□□□□ -0.54
GABPB1-212ENST00000615671 S4R3F8 94 aa11.64□□□□□ -0.55
GABPB1-212ENST00000615671 CR1P17927 2039 aa11.62□□□□□ -0.55
GABPB1-212ENST00000615671 HRES1P13985 223 aa11.61□□□□□ -0.55
GABPB1-212ENST00000615671 LINC00483Q53H64 154 aa11.61□□□□□ -0.55
GABPB1-212ENST00000615671 DNAH12Q6ZR08 3092 aa11.59□□□□□ -0.55
GABPB1-212ENST00000615671 A0A1B0GU33 70 aa11.59□□□□□ -0.55
GABPB1-212ENST00000615671 KTN1-AS1Q86SY8 53 aa11.58□□□□□ -0.56
GABPB1-212ENST00000615671 Q5VSD8 79 aa11.58□□□□□ -0.56
GABPB1-212ENST00000615671 SPANXA2-OT1Q8N9U9 137 aa11.56□□□□□ -0.56
GABPB1-212ENST00000615671 LCA10Q71F78 164 aa11.53□□□□□ -0.56
GABPB1-212ENST00000615671 Q1T7F1 81 aa11.53□□□□□ -0.56
GABPB1-212ENST00000615671 ZCCHC13Q8WW36 166 aaKnown RBP11.52□□□□□ -0.57
GABPB1-212ENST00000615671 Q8N9P0 234 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-212ENST00000615671 CSAG1Q6PB30 78 aa11.5□□□□□ -0.57
GABPB1-212ENST00000615671 BPTFQ12830 3046 aa11.49□□□□□ -0.57
GABPB1-212ENST00000615671 PLAC8Q9NZF1 115 aa11.48□□□□□ -0.57
GABPB1-212ENST00000615671 HECTD1Q9ULT8 2610 aa11.45□□□□□ -0.58
GABPB1-212ENST00000615671 USP24Q9UPU5 2620 aa11.45□□□□□ -0.58
GABPB1-212ENST00000615671 OCR1Q9BZK8 76 aa11.44□□□□□ -0.58
GABPB1-212ENST00000615671 FAM229BQ4G0N7 80 aa11.43□□□□□ -0.58
GABPB1-212ENST00000615671 WIPF1O43516 503 aa11.43□□□□□ -0.58
GABPB1-212ENST00000615671 R4GN34 69 aa11.42□□□□□ -0.58
GABPB1-212ENST00000615671 C5orf42Q9H799 3197 aa11.4□□□□□ -0.58
GABPB1-212ENST00000615671 Q8NDZ9 215 aa11.39□□□□□ -0.59
GABPB1-212ENST00000615671 MMP24-AS1A0A0U1RRL7 71 aa11.39□□□□□ -0.59
GABPB1-212ENST00000615671 SPINK7P58062 85 aa11.38□□□□□ -0.59
GABPB1-212ENST00000615671 KRTAP10-2P60368 255 aa11.38□□□□□ -0.59
GABPB1-212ENST00000615671 MGAM2Q2M2H8 2515 aa11.37□□□□□ -0.59
GABPB1-212ENST00000615671 KRTAP10-1P60331 282 aa11.37□□□□□ -0.59
GABPB1-212ENST00000615671 SEC61BP60468 96 aaKnown RBP11.35□□□□□ -0.59
GABPB1-212ENST00000615671 Q5W150 140 aa11.35□□□□□ -0.59
GABPB1-212ENST00000615671 KRTAP1-5Q9BYS1 174 aa11.35□□□□□ -0.59
GABPB1-212ENST00000615671 EPG5Q9HCE0 2579 aa11.31□□□□□ -0.6
GABPB1-212ENST00000615671 DMAC1Q96GE9 116 aa11.3□□□□□ -0.6
GABPB1-212ENST00000615671 PRAC1Q96KF2 57 aa11.28□□□□□ -0.6
GABPB1-212ENST00000615671 LCE6AA0A183 80 aa11.28□□□□□ -0.6
GABPB1-212ENST00000615671 CEP350Q5VT06 3117 aa11.27□□□□□ -0.61
GABPB1-212ENST00000615671 M0QZ58 72 aa11.25□□□□□ -0.61
GABPB1-212ENST00000615671 FLNBO75369 2602 aaKnown RBP11.24□□□□□ -0.61
GABPB1-212ENST00000615671 Q75L30 129 aa11.2□□□□□ -0.62
GABPB1-212ENST00000615671 CYSTM1Q9H1C7 97 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms