RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 LINC01600Q96MT4 127 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 SETXQ7Z333 2677 aaKnown RBP0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 FBN2P35556 2912 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 CACNA1HO95180 2353 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 TPRP12270 2363 aaKnown RBP0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 MAP1BP46821 2468 aaKnown RBP0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 NAV2Q8IVL1 2488 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 TSC2P49815 1807 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 ZNF292O60281 2723 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 CACNA1CQ13936 2221 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 SPEGQ15772 3267 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 PTPRZ1P23471 2315 aaPredicted RBP0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 MYMXA0A1B0GTQ4 84 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 HAMPP81172 84 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 PLGLAQ15195 96 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 HMGN3Q15651 99 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 Q5BKY6 102 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 C6orf201Q7Z4U5 140 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 C18orf32Q8TCD1 76 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 CHD7Q9P2D1 2997 aa0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 RIF1Q5UIP0 2472 aaKnown RBP0.91□□□□□ -2.26
SCAMP1-205ENST00000614488 GVINP1Q7Z2Y8 2422 aa0.9□□□□□ -2.26
SCAMP1-205ENST00000614488 CHD9Q3L8U1 2897 aa0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 CEBPZOSA8MTT3 80 aa0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 SPINK7P58062 85 aa0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 C10orf113Q5VZT2 155 aa0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 Q6JHZ5 121 aa0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 TMEM263Q8WUH6 116 aaKnown RBP0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 LINC00846Q9NV44 126 aa0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 VPS13AQ96RL7 3174 aa0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 FLNBO75369 2602 aaKnown RBP0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 GCN1Q92616 2671 aaKnown RBP0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 TRIOO75962 3097 aa0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 DMDP11532 3685 aa0.9□□□□□ -2.27
SCAMP1-205ENST00000614488 LOC400499M0QZD8 3231 aa0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 ANKRD11Q6UB99 2663 aaPredicted RBP0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 USP9XQ93008 2570 aaPredicted RBP0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 SMIM31A0A1B0GVY4 71 aa0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 H0Y9P7 68 aa0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 SMIM13P0DJ93 91 aa0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 GNGT1P63211 74 aa0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 FRYQ5TBA9 3013 aa0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 ANKRD17O75179 2603 aaKnown RBP0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 BPTFQ12830 3046 aa0.89□□□□□ -2.27
SCAMP1-205ENST00000614488 NCOR2Q9Y618 2525 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 CNTRLQ7Z7A1 2325 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 ZZEF1O43149 2961 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 WDFY3Q8IZQ1 3526 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 KNTC1P50748 2209 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 ZNF469Q96JG9 3925 aaPredicted RBP0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 LOC730098B7Z3J9 87 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 SPATA8Q6RVD6 105 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 PLAC8Q9NZF1 115 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 UBE2D4Q9Y2X8 147 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 CEP250Q9BV73 2442 aa0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 SMG1Q96Q15 3661 aaKnown RBP0.88□□□□□ -2.27
SCAMP1-205ENST00000614488 MYO18BQ8IUG5 2567 aa0.87□□□□□ -2.27
SCAMP1-205ENST00000614488 PTPN13Q12923 2485 aa0.87□□□□□ -2.27
SCAMP1-205ENST00000614488 DOPEY1Q5JWR5 2465 aa0.87□□□□□ -2.27
SCAMP1-205ENST00000614488 K7EIL1 84 aa0.87□□□□□ -2.27
SCAMP1-205ENST00000614488 TEP1Q99973 2627 aaKnown RBP0.87□□□□□ -2.27
SCAMP1-205ENST00000614488 DMXL2Q8TDJ6 3036 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 DNHD1Q96M86 4753 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 RELNP78509 3460 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 TRBV6-1A0A0K0K1D8 114 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 DEFB121Q5J5C9 76 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 HEPN1Q6WQI6 88 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 SSBP3-AS1Q7Z2R9 100 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 UBE2DNLQ8IWF7 75 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 ASXL3Q9C0F0 2248 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 FREM2Q5SZK8 3169 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 CNOT1A5YKK6 2376 aaKnown RBP0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 C2CD3Q4AC94 2353 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 NBEAQ8NFP9 2946 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 WDR87Q6ZQQ6 2873 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 ROS1P08922 2347 aa0.86□□□□□ -2.27
SCAMP1-205ENST00000614488 SPTA1P02549 2419 aa0.85□□□□□ -2.27
SCAMP1-205ENST00000614488 EP300Q09472 2414 aaPredicted RBP0.85□□□□□ -2.27
SCAMP1-205ENST00000614488 FRYLO94915 3013 aa0.85□□□□□ -2.27
SCAMP1-205ENST00000614488 A0A087WXM4 84 aa0.85□□□□□ -2.27
SCAMP1-205ENST00000614488 A0A1B0GUT8 65 aa0.85□□□□□ -2.27
SCAMP1-205ENST00000614488 PIN1P1O15428 100 aa0.85□□□□□ -2.27
SCAMP1-205ENST00000614488 TENM4Q6N022 2769 aa0.85□□□□□ -2.27
SCAMP1-205ENST00000614488 IGSF10Q6WRI0 2623 aa0.85□□□□□ -2.27
SCAMP1-205ENST00000614488 MYO9AB2RTY4 2548 aa0.84□□□□□ -2.27
SCAMP1-205ENST00000614488 ABCA2Q9BZC7 2435 aa0.84□□□□□ -2.27
SCAMP1-205ENST00000614488 A0A1B0GU69 56 aa0.84□□□□□ -2.27
SCAMP1-205ENST00000614488 UMAD1C9J7I0 102 aa0.84□□□□□ -2.27
SCAMP1-205ENST00000614488 S100A3P33764 101 aa0.84□□□□□ -2.27
SCAMP1-205ENST00000614488 FXYD6P3P58550 94 aa0.84□□□□□ -2.27
SCAMP1-205ENST00000614488 PCNX1Q96RV3 2341 aa0.84□□□□□ -2.28
SCAMP1-205ENST00000614488 ZFYVE26Q68DK2 2539 aa0.84□□□□□ -2.28
SCAMP1-205ENST00000614488 ITPR1Q14643 2758 aa0.84□□□□□ -2.28
SCAMP1-205ENST00000614488 TEX15Q9BXT5 2789 aa0.84□□□□□ -2.28
SCAMP1-205ENST00000614488 LAMA5O15230 3695 aa0.83□□□□□ -2.28
SCAMP1-205ENST00000614488 UBR5O95071 2799 aaPredicted RBP0.83□□□□□ -2.28
SCAMP1-205ENST00000614488 KALRNO60229 2985 aa0.83□□□□□ -2.28
SCAMP1-205ENST00000614488 TRBV7-4A0A0J9YYF1 115 aa0.83□□□□□ -2.28
SCAMP1-205ENST00000614488 H3BVH4 76 aa0.83□□□□□ -2.28
SCAMP1-205ENST00000614488 DEFB112Q30KQ8 113 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms