RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PCSK5Q92824 1860 aa11.51□□□□□ -0.57
HMGXB3-206ENST00000613459 A0A1B0GVX0 72 aa11.51□□□□□ -0.57
HMGXB3-206ENST00000613459 KTN1-AS1Q86SY8 53 aa11.5□□□□□ -0.57
HMGXB3-206ENST00000613459 C19orf73Q9NVV2 129 aa11.49□□□□□ -0.57
HMGXB3-206ENST00000613459 CRIPTQ9P021 101 aa11.49□□□□□ -0.57
HMGXB3-206ENST00000613459 MUC4Q99102 2169 aa11.49□□□□□ -0.57
HMGXB3-206ENST00000613459 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
HMGXB3-206ENST00000613459 ZNF861PO60384 105 aa11.48□□□□□ -0.57
HMGXB3-206ENST00000613459 LCA10Q71F78 164 aa11.46□□□□□ -0.58
HMGXB3-206ENST00000613459 Q8N377 158 aa11.45□□□□□ -0.58
HMGXB3-206ENST00000613459 POLQO75417 2590 aa11.44□□□□□ -0.58
HMGXB3-206ENST00000613459 DSCR10P59022 87 aa11.44□□□□□ -0.58
HMGXB3-206ENST00000613459 ANKRD17O75179 2603 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-206ENST00000613459 LINC00304Q8N9R0 145 aa11.43□□□□□ -0.58
HMGXB3-206ENST00000613459 SPANXA2-OT1Q8N9U9 137 aa11.42□□□□□ -0.58
HMGXB3-206ENST00000613459 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
HMGXB3-206ENST00000613459 APLNQ9ULZ1 77 aa11.4□□□□□ -0.58
HMGXB3-206ENST00000613459 C9orf163Q8N9P6 203 aa11.39□□□□□ -0.59
HMGXB3-206ENST00000613459 GIG44P09565 113 aaPredicted RBP11.36□□□□□ -0.59
HMGXB3-206ENST00000613459 ACANP16112 2415 aa11.35□□□□□ -0.59
HMGXB3-206ENST00000613459 A0A096LNT2 108 aa11.35□□□□□ -0.59
HMGXB3-206ENST00000613459 CDC42SE1Q9NRR8 79 aa11.35□□□□□ -0.59
HMGXB3-206ENST00000613459 A0A087WTM6 91 aa11.34□□□□□ -0.59
HMGXB3-206ENST00000613459 K7EIL1 84 aa11.34□□□□□ -0.59
HMGXB3-206ENST00000613459 CNBPP62633 177 aaKnown RBP11.34□□□□□ -0.59
HMGXB3-206ENST00000613459 IGLV5-37A0A075B6J1 123 aa11.33□□□□□ -0.6
HMGXB3-206ENST00000613459 KRTAP10-11P60412 298 aa11.33□□□□□ -0.6
HMGXB3-206ENST00000613459 BPTFQ12830 3046 aa11.31□□□□□ -0.6
HMGXB3-206ENST00000613459 FASNP49327 2511 aaKnown RBP11.31□□□□□ -0.6
HMGXB3-206ENST00000613459 J3QL48 77 aa11.31□□□□□ -0.6
HMGXB3-206ENST00000613459 IGLV7-43P04211 117 aa11.3□□□□□ -0.6
HMGXB3-206ENST00000613459 Q5XG85 94 aa11.3□□□□□ -0.6
HMGXB3-206ENST00000613459 SPRR4Q96PI1 79 aa11.29□□□□□ -0.6
HMGXB3-206ENST00000613459 GOLGB1Q14789 3259 aaKnown RBP11.29□□□□□ -0.6
HMGXB3-206ENST00000613459 OBSCN-AS1Q96MR7 158 aa11.29□□□□□ -0.6
HMGXB3-206ENST00000613459 IGLV5-48A0A075B6I7 105 aa11.26□□□□□ -0.61
HMGXB3-206ENST00000613459 COX6B2Q6YFQ2 88 aa11.26□□□□□ -0.61
HMGXB3-206ENST00000613459 FAM104AQ969W3 186 aa11.25□□□□□ -0.61
HMGXB3-206ENST00000613459 Q1T7F1 81 aa11.25□□□□□ -0.61
HMGXB3-206ENST00000613459 A0A1W2PNM2 257 aa11.25□□□□□ -0.61
HMGXB3-206ENST00000613459 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
HMGXB3-206ENST00000613459 RBM12B-AS1Q9P1G2 102 aa11.22□□□□□ -0.61
HMGXB3-206ENST00000613459 CYSTM1Q9H1C7 97 aa11.21□□□□□ -0.61
HMGXB3-206ENST00000613459 A0A0G2JQZ4 141 aa11.2□□□□□ -0.62
HMGXB3-206ENST00000613459 A0A1W2PNN7 141 aa11.2□□□□□ -0.62
HMGXB3-206ENST00000613459 PSORS1C2Q9UIG4 136 aa11.19□□□□□ -0.62
HMGXB3-206ENST00000613459 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
HMGXB3-206ENST00000613459 C9orf92A6NGG3 77 aa11.18□□□□□ -0.62
HMGXB3-206ENST00000613459 OCR1Q9BZK8 76 aa11.15□□□□□ -0.62
HMGXB3-206ENST00000613459 EPG5Q9HCE0 2579 aa11.12□□□□□ -0.63
HMGXB3-206ENST00000613459 F8P00451 2351 aa11.09□□□□□ -0.63
HMGXB3-206ENST00000613459 FP248Q71RG6 208 aaPredicted RBP11.09□□□□□ -0.63
HMGXB3-206ENST00000613459 Q75L30 129 aa11.08□□□□□ -0.64
HMGXB3-206ENST00000613459 ANAPC11Q9NYG5 84 aa11.06□□□□□ -0.64
HMGXB3-206ENST00000613459 IGLV7-46A0A075B6I9 117 aa11.06□□□□□ -0.64
HMGXB3-206ENST00000613459 PRRC2CQ9Y520 2896 aaKnown RBP11.06□□□□□ -0.64
HMGXB3-206ENST00000613459 A0A0D9SG42 100 aa11.06□□□□□ -0.64
HMGXB3-206ENST00000613459 Q8N1X5 172 aa11.06□□□□□ -0.64
HMGXB3-206ENST00000613459 DNAH12Q6ZR08 3092 aa11.06□□□□□ -0.64
HMGXB3-206ENST00000613459 OXTP01178 125 aa11.06□□□□□ -0.64
HMGXB3-206ENST00000613459 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
HMGXB3-206ENST00000613459 LUZP6Q538Z0 58 aa11.03□□□□□ -0.64
HMGXB3-206ENST00000613459 FAM229BQ4G0N7 80 aa11.03□□□□□ -0.64
HMGXB3-206ENST00000613459 KRTAP1-3Q8IUG1 177 aa11.01□□□□□ -0.65
HMGXB3-206ENST00000613459 PRR26Q8N8Z3 221 aa10.97□□□□□ -0.65
HMGXB3-206ENST00000613459 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.65
HMGXB3-206ENST00000613459 LINC01558Q9Y6Z2 57 aa10.95□□□□□ -0.66
HMGXB3-206ENST00000613459 KRTAP1-1Q07627 177 aa10.95□□□□□ -0.66
HMGXB3-206ENST00000613459 LINC01554Q52M75 96 aa10.95□□□□□ -0.66
HMGXB3-206ENST00000613459 A0A1B0GU33 70 aa10.93□□□□□ -0.66
HMGXB3-206ENST00000613459 HRES1P13985 223 aa10.91□□□□□ -0.66
HMGXB3-206ENST00000613459 A0A0C4DFX4 3053 aa10.89□□□□□ -0.67
HMGXB3-206ENST00000613459 HECTD1Q9ULT8 2610 aa10.87□□□□□ -0.67
HMGXB3-206ENST00000613459 Q6ZSA8 131 aa10.86□□□□□ -0.67
HMGXB3-206ENST00000613459 Q8N9P0 234 aaPredicted RBP10.86□□□□□ -0.67
HMGXB3-206ENST00000613459 LINC00483Q53H64 154 aa10.86□□□□□ -0.67
HMGXB3-206ENST00000613459 FLNBO75369 2602 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-206ENST00000613459 SPRR1AP35321 89 aa10.86□□□□□ -0.67
HMGXB3-206ENST00000613459 USP24Q9UPU5 2620 aa10.85□□□□□ -0.67
HMGXB3-206ENST00000613459 MMP24-AS1A0A0U1RRL7 71 aa10.84□□□□□ -0.67
HMGXB3-206ENST00000613459 PLAC8Q9NZF1 115 aa10.82□□□□□ -0.68
HMGXB3-206ENST00000613459 SPRR1BP22528 89 aa10.82□□□□□ -0.68
HMGXB3-206ENST00000613459 DMAC1Q96GE9 116 aa10.81□□□□□ -0.68
HMGXB3-206ENST00000613459 CEP350Q5VT06 3117 aa10.81□□□□□ -0.68
HMGXB3-206ENST00000613459 MGAM2Q2M2H8 2515 aa10.81□□□□□ -0.68
HMGXB3-206ENST00000613459 ZCCHC13Q8WW36 166 aaKnown RBP10.8□□□□□ -0.68
HMGXB3-206ENST00000613459 TNP2Q05952 138 aa10.8□□□□□ -0.68
HMGXB3-206ENST00000613459 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.78□□□□□ -0.68
HMGXB3-206ENST00000613459 PCNTO95613 3336 aa10.78□□□□□ -0.68
HMGXB3-206ENST00000613459 Q5VV11 94 aa10.76□□□□□ -0.69
HMGXB3-206ENST00000613459 CAMK2N1Q7Z7J9 78 aa10.74□□□□□ -0.69
HMGXB3-206ENST00000613459 H3BS24 57 aa10.73□□□□□ -0.69
HMGXB3-206ENST00000613459 FLNAP21333 2647 aaKnown RBP10.72□□□□□ -0.69
HMGXB3-206ENST00000613459 CSAG1Q6PB30 78 aa10.7□□□□□ -0.7
HMGXB3-206ENST00000613459 LINC00472Q9H8W2 130 aa10.69□□□□□ -0.7
HMGXB3-206ENST00000613459 PRAC1Q96KF2 57 aa10.69□□□□□ -0.7
HMGXB3-206ENST00000613459 S4R3F8 94 aa10.67□□□□□ -0.7
HMGXB3-206ENST00000613459 CHD7Q9P2D1 2997 aa10.66□□□□□ -0.7
HMGXB3-206ENST00000613459 Q5W150 140 aa10.66□□□□□ -0.7
HMGXB3-206ENST00000613459 CR1P17927 2039 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms