RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 TRAV23DV6A0A075B6W5 121 aa13.47□□□□□ -0.25
CDKN3-211ENST00000611205 IGLV6-57P01721 117 aa13.47□□□□□ -0.25
CDKN3-211ENST00000611205 NDUFC2O95298 119 aa13.45□□□□□ -0.26
CDKN3-211ENST00000611205 LGALS3P17931 250 aaKnown RBP13.44□□□□□ -0.26
CDKN3-211ENST00000611205 HERVK_113P61574 105 aa13.44□□□□□ -0.26
CDKN3-211ENST00000611205 NPC2P61916 151 aa13.44□□□□□ -0.26
CDKN3-211ENST00000611205 ST20-AS1Q8NBB2 130 aa13.44□□□□□ -0.26
CDKN3-211ENST00000611205 DPM2O94777 84 aa13.43□□□□□ -0.26
CDKN3-211ENST00000611205 NMUP48645 174 aa13.43□□□□□ -0.26
CDKN3-211ENST00000611205 ZNF73O43830 326 aaPredicted RBP13.42□□□□□ -0.26
CDKN3-211ENST00000611205 COLCA2A8K830 154 aa13.41□□□□□ -0.26
CDKN3-211ENST00000611205 FABP4P15090 132 aa13.41□□□□□ -0.26
CDKN3-211ENST00000611205 PMCHL2Q9BQD1 86 aa13.41□□□□□ -0.26
CDKN3-211ENST00000611205 SOSTDC1Q6X4U4 206 aa13.4□□□□□ -0.26
CDKN3-211ENST00000611205 IGKCP01834 107 aa13.39□□□□□ -0.27
CDKN3-211ENST00000611205 EIF4EBP3O60516 100 aaPredicted RBP13.37□□□□□ -0.27
CDKN3-211ENST00000611205 HINT1P49773 126 aaPredicted RBP13.37□□□□□ -0.27
CDKN3-211ENST00000611205 LCE2CQ5TA81 110 aa13.37□□□□□ -0.27
CDKN3-211ENST00000611205 HRCT1Q6UXD1 115 aa13.36□□□□□ -0.27
CDKN3-211ENST00000611205 ADAMTSL4-AS1Q5T5F5 129 aa13.35□□□□□ -0.27
CDKN3-211ENST00000611205 A0A0J9YXY3 114 aa13.34□□□□□ -0.27
CDKN3-211ENST00000611205 LIMD2Q9BT23 127 aa13.34□□□□□ -0.27
CDKN3-211ENST00000611205 CRCT1Q9UGL9 99 aa13.34□□□□□ -0.27
CDKN3-211ENST00000611205 C5orf52A6NGY3 159 aa13.33□□□□□ -0.28
CDKN3-211ENST00000611205 PCOTHQ58A44 107 aa13.32□□□□□ -0.28
CDKN3-211ENST00000611205 CBY1Q9Y3M2 126 aa13.32□□□□□ -0.28
CDKN3-211ENST00000611205 FSIP2Q5CZC0 6907 aa13.31□□□□□ -0.28
CDKN3-211ENST00000611205 C9orf92A6NGG3 77 aa13.31□□□□□ -0.28
CDKN3-211ENST00000611205 IGLV8-61A0A075B6I0 122 aa13.3□□□□□ -0.28
CDKN3-211ENST00000611205 OR13C6PQ8NH95 151 aa13.3□□□□□ -0.28
CDKN3-211ENST00000611205 E9PLD3 99 aa13.29□□□□□ -0.28
CDKN3-211ENST00000611205 KRTAP19-2Q3LHN2 52 aa13.29□□□□□ -0.28
CDKN3-211ENST00000611205 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
CDKN3-211ENST00000611205 S100A6P06703 90 aa13.28□□□□□ -0.28
CDKN3-211ENST00000611205 SPRR1BP22528 89 aa13.28□□□□□ -0.28
CDKN3-211ENST00000611205 LINC00518Q8N0U6 118 aa13.28□□□□□ -0.28
CDKN3-211ENST00000611205 MT1HP80294 61 aa13.26□□□□□ -0.29
CDKN3-211ENST00000611205 DHRS4-AS1Q9P1J3 65 aa13.26□□□□□ -0.29
CDKN3-211ENST00000611205 LAMTOR3Q9UHA4 124 aa13.26□□□□□ -0.29
CDKN3-211ENST00000611205 SYS1-DBNDD2H3BUS1 97 aa13.25□□□□□ -0.29
CDKN3-211ENST00000611205 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
CDKN3-211ENST00000611205 LINC00308Q8TCZ7 52 aa13.24□□□□□ -0.29
CDKN3-211ENST00000611205 HIST1H2BKO60814 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST1H2BJP06899 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 SMIM6P0DI80 62 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST1H2BOP23527 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST1H2BBP33778 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST1H2BDP58876 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST1H2BCP62807 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST2H2BEQ16778 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST1H2BHQ93079 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST1H2BNQ99877 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 HIST1H2BMQ99879 126 aa13.23□□□□□ -0.29
CDKN3-211ENST00000611205 LINC01545Q5VT33 79 aa13.2□□□□□ -0.3
CDKN3-211ENST00000611205 LITAFQ99732 161 aa13.2□□□□□ -0.3
CDKN3-211ENST00000611205 CFC1BP0CG36 223 aa13.19□□□□□ -0.3
CDKN3-211ENST00000611205 AKR1D1P51857 326 aa13.19□□□□□ -0.3
CDKN3-211ENST00000611205 Q1RN00 199 aa13.19□□□□□ -0.3
CDKN3-211ENST00000611205 DEFB105AQ8NG35 78 aa13.19□□□□□ -0.3
CDKN3-211ENST00000611205 TIMM17BO60830 172 aa13.18□□□□□ -0.3
CDKN3-211ENST00000611205 COX7BP24311 80 aa13.18□□□□□ -0.3
CDKN3-211ENST00000611205 TAL2Q16559 108 aa13.18□□□□□ -0.3
CDKN3-211ENST00000611205 PET117Q6UWS5 81 aa13.18□□□□□ -0.3
CDKN3-211ENST00000611205 SPANXDQ9BXN6 97 aa13.18□□□□□ -0.3
CDKN3-211ENST00000611205 H7C2G1 150 aa13.16□□□□□ -0.3
CDKN3-211ENST00000611205 ELOF1P60002 83 aaKnown RBP13.16□□□□□ -0.3
CDKN3-211ENST00000611205 C6orf99Q4VX62 202 aa13.16□□□□□ -0.3
CDKN3-211ENST00000611205 PRO1933Q9H354 126 aa13.15□□□□□ -0.3
CDKN3-211ENST00000611205 SNRPEP62304 92 aaKnown RBP13.14□□□□□ -0.31
CDKN3-211ENST00000611205 CD164Q04900 197 aa13.14□□□□□ -0.31
CDKN3-211ENST00000611205 C12orf57Q99622 126 aa13.14□□□□□ -0.31
CDKN3-211ENST00000611205 TEX49A0A1B0GTD5 131 aa13.11□□□□□ -0.31
CDKN3-211ENST00000611205 ZNF815PA8K554 130 aa13.11□□□□□ -0.31
CDKN3-211ENST00000611205 C3orf79P0CE67 100 aa13.09□□□□□ -0.31
CDKN3-211ENST00000611205 COA6Q5JTJ3 125 aaKnown RBP13.09□□□□□ -0.31
CDKN3-211ENST00000611205 TTTY13Q9BZ97 58 aa13.08□□□□□ -0.32
CDKN3-211ENST00000611205 LORP23490 312 aaPredicted RBP13.07□□□□□ -0.32
CDKN3-211ENST00000611205 S100A2P29034 98 aa13.06□□□□□ -0.32
CDKN3-211ENST00000611205 KRTAP10-6P60371 365 aaPredicted RBP13.06□□□□□ -0.32
CDKN3-211ENST00000611205 C1orf195Q5TG92 126 aa13.06□□□□□ -0.32
CDKN3-211ENST00000611205 A0A0G2JQZ4 141 aa13.05□□□□□ -0.32
CDKN3-211ENST00000611205 M0R2T5 61 aa13.05□□□□□ -0.32
CDKN3-211ENST00000611205 Q5XG85 94 aa13.05□□□□□ -0.32
CDKN3-211ENST00000611205 SMIM29Q86T20 159 aa13.05□□□□□ -0.32
CDKN3-211ENST00000611205 KRTDAPP60985 99 aa13.02□□□□□ -0.33
CDKN3-211ENST00000611205 RPL37P61927 97 aaKnown RBP13.02□□□□□ -0.33
CDKN3-211ENST00000611205 TRBV7-6A0A0J9YX20 115 aa13.01□□□□□ -0.33
CDKN3-211ENST00000611205 COX6B2Q6YFQ2 88 aa13.01□□□□□ -0.33
CDKN3-211ENST00000611205 A0A1B0GWB2 263 aa13□□□□□ -0.33
CDKN3-211ENST00000611205 C20orf202A1L168 122 aa12.99□□□□□ -0.33
CDKN3-211ENST00000611205 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
CDKN3-211ENST00000611205 SCGB1D4Q6XE38 83 aa12.98□□□□□ -0.33
CDKN3-211ENST00000611205 HIST3H2BBQ8N257 126 aa12.98□□□□□ -0.33
CDKN3-211ENST00000611205 IGLV5-48A0A075B6I7 105 aa12.97□□□□□ -0.33
CDKN3-211ENST00000611205 A6NDN8 102 aa12.97□□□□□ -0.33
CDKN3-211ENST00000611205 IFITM1P13164 125 aa12.95□□□□□ -0.34
CDKN3-211ENST00000611205 PCP4L1A6NKN8 68 aa12.94□□□□□ -0.34
CDKN3-211ENST00000611205 ANKRD39Q53RE8 183 aa12.94□□□□□ -0.34
CDKN3-211ENST00000611205 Q6ZVH6 145 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms