RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 IGLV6-57P01721 117 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 UBE2AP49459 152 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 DEFB116Q30KQ4 102 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 C22orf24Q9Y442 160 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 C7orf33Q8WU49 177 aa4.6□□□□□ -1.67
SYNPO2-206ENST00000610556 DHRS4-AS1Q9P1J3 65 aa4.6□□□□□ -1.67
SYNPO2-206ENST00000610556 ANK3Q12955 4377 aaKnown RBP4.6□□□□□ -1.67
SYNPO2-206ENST00000610556 COL6A5A8TX70 2615 aa4.6□□□□□ -1.67
SYNPO2-206ENST00000610556 ELOF1P60002 83 aaKnown RBP4.59□□□□□ -1.67
SYNPO2-206ENST00000610556 Q8NDZ9 215 aa4.59□□□□□ -1.67
SYNPO2-206ENST00000610556 C2orf48Q96LS8 159 aa4.59□□□□□ -1.67
SYNPO2-206ENST00000610556 TM2D3Q9BRN9 247 aa4.59□□□□□ -1.67
SYNPO2-206ENST00000610556 CDK2AP2O75956 126 aa4.59□□□□□ -1.67
SYNPO2-206ENST00000610556 VPREB1P12018 145 aa4.59□□□□□ -1.67
SYNPO2-206ENST00000610556 C4orf26Q17RF5 130 aa4.59□□□□□ -1.67
SYNPO2-206ENST00000610556 Q6ZRP5 223 aa4.59□□□□□ -1.67
SYNPO2-206ENST00000610556 MP68P56378 58 aa4.59□□□□□ -1.68
SYNPO2-206ENST00000610556 TMEM254Q8TBM7 123 aa4.59□□□□□ -1.68
SYNPO2-206ENST00000610556 CMYA5Q8N3K9 4069 aa4.59□□□□□ -1.68
SYNPO2-206ENST00000610556 LOC110117498A0A087WWA1 95 aa4.58□□□□□ -1.68
SYNPO2-206ENST00000610556 H0Y9J4 135 aa4.58□□□□□ -1.68
SYNPO2-206ENST00000610556 NDUFS5O43920 106 aa4.58□□□□□ -1.68
SYNPO2-206ENST00000610556 CXCL6P80162 114 aa4.58□□□□□ -1.68
SYNPO2-206ENST00000610556 HIVEP1P15822 2718 aa4.58□□□□□ -1.68
SYNPO2-206ENST00000610556 NIPBLQ6KC79 2804 aaeCLIP4.58□□□□□ -1.68
SYNPO2-206ENST00000610556 A0A0U1RQV1 116 aa4.58□□□□□ -1.68
SYNPO2-206ENST00000610556 PRR34Q9NV39 138 aa4.58□□□□□ -1.68
SYNPO2-206ENST00000610556 NDUFC1O43677 76 aa4.57□□□□□ -1.68
SYNPO2-206ENST00000610556 OBSCN-AS1Q96MR7 158 aa4.57□□□□□ -1.68
SYNPO2-206ENST00000610556 PRLHP81277 87 aa4.57□□□□□ -1.68
SYNPO2-206ENST00000610556 ST20-AS1Q8NBB2 130 aa4.57□□□□□ -1.68
SYNPO2-206ENST00000610556 CYSTM1Q9H1C7 97 aa4.57□□□□□ -1.68
SYNPO2-206ENST00000610556 PKIGQ9Y2B9 76 aa4.57□□□□□ -1.68
SYNPO2-206ENST00000610556 SERP1Q9Y6X1 66 aa4.57□□□□□ -1.68
SYNPO2-206ENST00000610556 PDZD2O15018 2839 aa4.57□□□□□ -1.68
SYNPO2-206ENST00000610556 FAM168BA1KXE4 195 aa4.56□□□□□ -1.68
SYNPO2-206ENST00000610556 LINC01556Q5JQF7 62 aa4.56□□□□□ -1.68
SYNPO2-206ENST00000610556 MRPL55Q7Z7F7 128 aaKnown RBP4.56□□□□□ -1.68
SYNPO2-206ENST00000610556 LINC00167Q96N53 147 aa4.56□□□□□ -1.68
SYNPO2-206ENST00000610556 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
SYNPO2-206ENST00000610556 GVQW2A0A096LPI5 108 aaPredicted RBP4.56□□□□□ -1.68
SYNPO2-206ENST00000610556 SERTAD4-AS1Q5TG53 156 aa4.56□□□□□ -1.68
SYNPO2-206ENST00000610556 BAHCC1Q9P281 2608 aa4.55□□□□□ -1.68
SYNPO2-206ENST00000610556 A0A087WSZ3 146 aa4.55□□□□□ -1.68
SYNPO2-206ENST00000610556 PRYO14603 147 aa4.55□□□□□ -1.68
SYNPO2-206ENST00000610556 REG3GQ6UW15 175 aa4.55□□□□□ -1.68
SYNPO2-206ENST00000610556 SMIM29Q86T20 159 aa4.55□□□□□ -1.68
SYNPO2-206ENST00000610556 C15orf56Q8N910 161 aa4.54□□□□□ -1.68
SYNPO2-206ENST00000610556 NDUFB1O75438 58 aa4.54□□□□□ -1.68
SYNPO2-206ENST00000610556 LINC00528Q8N1L1 170 aa4.54□□□□□ -1.68
SYNPO2-206ENST00000610556 NSD1Q96L73 2696 aaPredicted RBP4.54□□□□□ -1.68
SYNPO2-206ENST00000610556 TRBV7-6A0A0J9YX20 115 aa4.54□□□□□ -1.68
SYNPO2-206ENST00000610556 A0A0G2JQZ4 141 aa4.53□□□□□ -1.68
SYNPO2-206ENST00000610556 A0A1W2PNN7 141 aa4.53□□□□□ -1.68
SYNPO2-206ENST00000610556 KRTAP10-11P60412 298 aa4.53□□□□□ -1.68
SYNPO2-206ENST00000610556 B9D2Q9BPU9 175 aa4.53□□□□□ -1.69
SYNPO2-206ENST00000610556 TRBV7-4A0A0J9YYF1 115 aa4.52□□□□□ -1.69
SYNPO2-206ENST00000610556 Q6ZRX8 168 aa4.52□□□□□ -1.69
SYNPO2-206ENST00000610556 LINC00208Q96KT6 92 aa4.52□□□□□ -1.69
SYNPO2-206ENST00000610556 KRTAP24-1Q3LI83 254 aa4.52□□□□□ -1.69
SYNPO2-206ENST00000610556 LINC00588Q9Y4M8 146 aa4.52□□□□□ -1.69
SYNPO2-206ENST00000610556 IGLV9-49A0A0B4J1Y8 123 aa4.52□□□□□ -1.69
SYNPO2-206ENST00000610556 H3BNG1 76 aa4.52□□□□□ -1.69
SYNPO2-206ENST00000610556 ATP5EP56381 51 aaPredicted RBP4.52□□□□□ -1.69
SYNPO2-206ENST00000610556 H7BZZ5 65 aa4.51□□□□□ -1.69
SYNPO2-206ENST00000610556 CASC10Q5T4H9 136 aa4.51□□□□□ -1.69
SYNPO2-206ENST00000610556 Q8N377 158 aa4.51□□□□□ -1.69
SYNPO2-206ENST00000610556 Q9BRP9 147 aa4.51□□□□□ -1.69
SYNPO2-206ENST00000610556 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
SYNPO2-206ENST00000610556 C14orf177Q52M58 125 aa4.5□□□□□ -1.69
SYNPO2-206ENST00000610556 Q8NBF4 154 aa4.5□□□□□ -1.69
SYNPO2-206ENST00000610556 BCE1O60756 84 aa4.5□□□□□ -1.69
SYNPO2-206ENST00000610556 LINC00474Q9P2X8 69 aa4.49□□□□□ -1.69
SYNPO2-206ENST00000610556 LINC00476Q8WZB0 136 aa4.49□□□□□ -1.69
SYNPO2-206ENST00000610556 KCNQ1DNQ9H478 68 aa4.49□□□□□ -1.69
SYNPO2-206ENST00000610556 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
SYNPO2-206ENST00000610556 PSPHP1O15172 72 aa4.48□□□□□ -1.69
SYNPO2-206ENST00000610556 IGKV4-1P06312 121 aa4.48□□□□□ -1.69
SYNPO2-206ENST00000610556 HCG22E2RYF7 251 aa4.48□□□□□ -1.69
SYNPO2-206ENST00000610556 SPINK6Q6UWN8 80 aa4.48□□□□□ -1.69
SYNPO2-206ENST00000610556 ERC2-IT1O76042 136 aa4.48□□□□□ -1.69
SYNPO2-206ENST00000610556 DNAH10OSP0CZ25 163 aa4.48□□□□□ -1.69
SYNPO2-206ENST00000610556 RPL37AP61513 92 aaKnown RBP4.48□□□□□ -1.69
SYNPO2-206ENST00000610556 KLKP1Q107X0 134 aa4.48□□□□□ -1.69
SYNPO2-206ENST00000610556 K7EQZ3 153 aa4.47□□□□□ -1.69
SYNPO2-206ENST00000610556 DNAH3Q8TD57 4116 aa4.47□□□□□ -1.69
SYNPO2-206ENST00000610556 SEC61GP60059 68 aa4.47□□□□□ -1.69
SYNPO2-206ENST00000610556 IGLV1-50A0A075B6I6 118 aa4.47□□□□□ -1.69
SYNPO2-206ENST00000610556 CASC2Q6XLA1 102 aa4.47□□□□□ -1.69
SYNPO2-206ENST00000610556 PHF5AQ7RTV0 110 aaKnown RBP4.47□□□□□ -1.69
SYNPO2-206ENST00000610556 V9GYY9 64 aa4.47□□□□□ -1.69
SYNPO2-206ENST00000610556 A0A1W2PNM2 257 aa4.46□□□□□ -1.7
SYNPO2-206ENST00000610556 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
SYNPO2-206ENST00000610556 PCOTHQ58A44 107 aa4.45□□□□□ -1.7
SYNPO2-206ENST00000610556 VWFP04275 2813 aa4.44□□□□□ -1.7
SYNPO2-206ENST00000610556 H0Y9P7 68 aa4.44□□□□□ -1.7
SYNPO2-206ENST00000610556 EPM2AB3EWF7 344 aa4.43□□□□□ -1.7
SYNPO2-206ENST00000610556 OXTP01178 125 aa4.43□□□□□ -1.7
SYNPO2-206ENST00000610556 LINC00336Q6ZUF6 198 aa4.43□□□□□ -1.7
SYNPO2-206ENST00000610556 ANK2Q01484 3957 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms