RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LINC00575Q6W349 94 aa2.17□□□□□ -2.06
LINC00397-202ENST00000606785 C10orf55Q5SWW7 151 aa2.16□□□□□ -2.06
LINC00397-202ENST00000606785 SSBP3-AS1Q7Z2R9 100 aa2.16□□□□□ -2.06
LINC00397-202ENST00000606785 RPL39LQ96EH5 51 aaKnown RBP2.16□□□□□ -2.06
LINC00397-202ENST00000606785 BRWD1Q9NSI6 2320 aa2.16□□□□□ -2.06
LINC00397-202ENST00000606785 CACNA1CQ13936 2221 aa2.15□□□□□ -2.06
LINC00397-202ENST00000606785 LY6G6CO95867 125 aa2.15□□□□□ -2.07
LINC00397-202ENST00000606785 ANGP03950 147 aaKnown RBP2.15□□□□□ -2.07
LINC00397-202ENST00000606785 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
LINC00397-202ENST00000606785 SPTY2D1-AS1A0A0U1RR47 76 aa2.14□□□□□ -2.07
LINC00397-202ENST00000606785 KRTAP12-1P59990 96 aa2.14□□□□□ -2.07
LINC00397-202ENST00000606785 F5P12259 2224 aa2.14□□□□□ -2.07
LINC00397-202ENST00000606785 MED13LQ71F56 2210 aa2.14□□□□□ -2.07
LINC00397-202ENST00000606785 PRO3102Q9H379 93 aa2.13□□□□□ -2.07
LINC00397-202ENST00000606785 BPTFQ12830 3046 aa2.13□□□□□ -2.07
LINC00397-202ENST00000606785 KNTC1P50748 2209 aa2.12□□□□□ -2.07
LINC00397-202ENST00000606785 A0A096LNT2 108 aa2.12□□□□□ -2.07
LINC00397-202ENST00000606785 INE1O15225 51 aa2.12□□□□□ -2.07
LINC00397-202ENST00000606785 G3V318 75 aa2.11□□□□□ -2.07
LINC00397-202ENST00000606785 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
LINC00397-202ENST00000606785 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.11□□□□□ -2.07
LINC00397-202ENST00000606785 TP53AIP1Q9HCN2 124 aa2.11□□□□□ -2.07
LINC00397-202ENST00000606785 CADP27708 2225 aa2.1□□□□□ -2.07
LINC00397-202ENST00000606785 LYNX1G3V0Z9 82 aa2.1□□□□□ -2.07
LINC00397-202ENST00000606785 Q6ZRX8 168 aa2.1□□□□□ -2.07
LINC00397-202ENST00000606785 LEAP2Q969E1 77 aa2.1□□□□□ -2.07
LINC00397-202ENST00000606785 TECTAO75443 2155 aa2.09□□□□□ -2.07
LINC00397-202ENST00000606785 I3L2K1 104 aa2.09□□□□□ -2.07
LINC00397-202ENST00000606785 K7EQZ3 153 aa2.09□□□□□ -2.07
LINC00397-202ENST00000606785 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
LINC00397-202ENST00000606785 PLAC4Q8WY50 150 aa2.09□□□□□ -2.07
LINC00397-202ENST00000606785 SORL1Q92673 2214 aa2.09□□□□□ -2.08
LINC00397-202ENST00000606785 M0QY20 66 aa2.07□□□□□ -2.08
LINC00397-202ENST00000606785 MINOS1Q5TGZ0 78 aa2.07□□□□□ -2.08
LINC00397-202ENST00000606785 IGLV5-48A0A075B6I7 105 aa2.06□□□□□ -2.08
LINC00397-202ENST00000606785 GVQW2A0A096LPI5 108 aaPredicted RBP2.06□□□□□ -2.08
LINC00397-202ENST00000606785 TMEM167AQ8TBQ9 72 aa2.06□□□□□ -2.08
LINC00397-202ENST00000606785 PDE4DIPQ5VU43 2346 aa2.06□□□□□ -2.08
LINC00397-202ENST00000606785 J3QKU1 62 aa2.05□□□□□ -2.08
LINC00397-202ENST00000606785 WFDC13Q8IUB5 93 aa2.05□□□□□ -2.08
LINC00397-202ENST00000606785 C6orf48Q9UBA6 75 aa2.05□□□□□ -2.08
LINC00397-202ENST00000606785 ANKRD17O75179 2603 aaKnown RBP2.05□□□□□ -2.08
LINC00397-202ENST00000606785 PTPRQQ9UMZ3 2332 aa2.05□□□□□ -2.08
LINC00397-202ENST00000606785 URB1O60287 2271 aaKnown RBP2.04□□□□□ -2.08
LINC00397-202ENST00000606785 COX6A2Q02221 97 aa2.04□□□□□ -2.08
LINC00397-202ENST00000606785 WFDC10BQ8IUB3 73 aa2.04□□□□□ -2.08
LINC00397-202ENST00000606785 CRIPTQ9P021 101 aa2.04□□□□□ -2.08
LINC00397-202ENST00000606785 WT1-ASQ06250 92 aa2.03□□□□□ -2.08
LINC00397-202ENST00000606785 C10orf99Q6UWK7 81 aa2.03□□□□□ -2.08
LINC00397-202ENST00000606785 RPL39P5Q59GN2 51 aa2.02□□□□□ -2.09
LINC00397-202ENST00000606785 TRIOBPQ9H2D6 2365 aa2.02□□□□□ -2.09
LINC00397-202ENST00000606785 USF3Q68DE3 2245 aa2.01□□□□□ -2.09
LINC00397-202ENST00000606785 COX6B2Q6YFQ2 88 aa2.01□□□□□ -2.09
LINC00397-202ENST00000606785 ASXL3Q9C0F0 2248 aa2.01□□□□□ -2.09
LINC00397-202ENST00000606785 MRPL34Q9BQ48 92 aaKnown RBP2□□□□□ -2.09
LINC00397-202ENST00000606785 ABCA1O95477 2261 aa2□□□□□ -2.09
LINC00397-202ENST00000606785 DEFB108AA8MXU0 73 aa1.99□□□□□ -2.09
LINC00397-202ENST00000606785 H0YAA0 97 aa1.99□□□□□ -2.09
LINC00397-202ENST00000606785 K7EIM0 57 aa1.98□□□□□ -2.09
LINC00397-202ENST00000606785 DEFB131AP59861 70 aa1.97□□□□□ -2.09
LINC00397-202ENST00000606785 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
LINC00397-202ENST00000606785 UBE2DNLQ8IWF7 75 aa1.97□□□□□ -2.09
LINC00397-202ENST00000606785 DEFB104AQ8WTQ1 72 aa1.97□□□□□ -2.09
LINC00397-202ENST00000606785 USMG5Q96IX5 58 aa1.97□□□□□ -2.09
LINC00397-202ENST00000606785 TOMM7Q9P0U1 55 aa1.97□□□□□ -2.09
LINC00397-202ENST00000606785 KAAG1Q9UBP8 84 aa1.97□□□□□ -2.09
LINC00397-202ENST00000606785 DOPEY2Q9Y3R5 2298 aa1.96□□□□□ -2.1
LINC00397-202ENST00000606785 SPINK13Q1W4C9 94 aa1.96□□□□□ -2.1
LINC00397-202ENST00000606785 UNQ6190/PRO20217Q6UXQ8 127 aa1.96□□□□□ -2.1
LINC00397-202ENST00000606785 Q6ZSA8 131 aa1.96□□□□□ -2.1
LINC00397-202ENST00000606785 AHCTF1Q8WYP5 2266 aa1.96□□□□□ -2.1
LINC00397-202ENST00000606785 FBN1P35555 2871 aaKnown RBP1.96□□□□□ -2.1
LINC00397-202ENST00000606785 CNOT1A5YKK6 2376 aaKnown RBP1.95□□□□□ -2.1
LINC00397-202ENST00000606785 MMP24-AS1A0A0U1RRL7 71 aa1.95□□□□□ -2.1
LINC00397-202ENST00000606785 ALMS1Q8TCU4 4167 aa1.95□□□□□ -2.1
LINC00397-202ENST00000606785 KNL1Q8NG31 2342 aa1.94□□□□□ -2.1
LINC00397-202ENST00000606785 RPL37P61927 97 aaKnown RBP1.94□□□□□ -2.1
LINC00397-202ENST00000606785 ASCC3Q8N3C0 2202 aaKnown RBP1.94□□□□□ -2.1
LINC00397-202ENST00000606785 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.93□□□□□ -2.1
LINC00397-202ENST00000606785 A8MTW9 85 aa1.93□□□□□ -2.1
LINC00397-202ENST00000606785 H1FX-AS1Q4G0G2 97 aa1.93□□□□□ -2.1
LINC00397-202ENST00000606785 DEFB119Q8N690 84 aa1.93□□□□□ -2.1
LINC00397-202ENST00000606785 STATHP02808 62 aa1.92□□□□□ -2.1
LINC00397-202ENST00000606785 DEFB123Q8N688 67 aa1.92□□□□□ -2.1
LINC00397-202ENST00000606785 LYNX1P0DP58 116 aa1.91□□□□□ -2.1
LINC00397-202ENST00000606785 CACNA1EQ15878 2313 aa1.91□□□□□ -2.1
LINC00397-202ENST00000606785 DEFB130BP0DP73 79 aa1.9□□□□□ -2.11
LINC00397-202ENST00000606785 DEFB130AP0DP74 79 aa1.9□□□□□ -2.11
LINC00397-202ENST00000606785 C10orf95Q9H7T3 257 aa1.9□□□□□ -2.11
LINC00397-202ENST00000606785 CNTRLQ7Z7A1 2325 aa1.9□□□□□ -2.11
LINC00397-202ENST00000606785 CLPSL2Q6UWE3 100 aa1.89□□□□□ -2.11
LINC00397-202ENST00000606785 LELP1Q5T871 98 aa1.88□□□□□ -2.11
LINC00397-202ENST00000606785 PLCE1Q9P212 2302 aa1.88□□□□□ -2.11
LINC00397-202ENST00000606785 COL6A6A6NMZ7 2263 aa1.87□□□□□ -2.11
LINC00397-202ENST00000606785 H0YGG7 62 aa1.87□□□□□ -2.11
LINC00397-202ENST00000606785 KLK9Q2XQG4 91 aa1.87□□□□□ -2.11
LINC00397-202ENST00000606785 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
LINC00397-202ENST00000606785 DEFB105AQ8NG35 78 aa1.87□□□□□ -2.11
LINC00397-202ENST00000606785 H3BUA1 57 aa1.86□□□□□ -2.11
LINC00397-202ENST00000606785 DEFB109BQ30KR1 87 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms