RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 UBE2AP49459 152 aa11.83□□□□□ -0.52
PPFIA3-204ENST00000602492 MIR7-3HGQ8N6C7 128 aa11.83□□□□□ -0.52
PPFIA3-204ENST00000602492 ADAMTSL4-AS1Q5T5F5 129 aa11.82□□□□□ -0.52
PPFIA3-204ENST00000602492 NKAPP1Q8N9T2 125 aa11.82□□□□□ -0.52
PPFIA3-204ENST00000602492 HIST1H4GQ99525 98 aa11.82□□□□□ -0.52
PPFIA3-204ENST00000602492 IGLV5-37A0A075B6J1 123 aa11.81□□□□□ -0.52
PPFIA3-204ENST00000602492 KRTAP13-2Q52LG2 175 aa11.8□□□□□ -0.52
PPFIA3-204ENST00000602492 KRTAP13-1Q8IUC0 172 aa11.8□□□□□ -0.52
PPFIA3-204ENST00000602492 KRTAP9-2Q9BYQ4 174 aa11.8□□□□□ -0.52
PPFIA3-204ENST00000602492 FAM229BQ4G0N7 80 aa11.79□□□□□ -0.52
PPFIA3-204ENST00000602492 LINC00308Q8TCZ7 52 aa11.79□□□□□ -0.52
PPFIA3-204ENST00000602492 SND1-IT1Q9HBX3 110 aa11.79□□□□□ -0.52
PPFIA3-204ENST00000602492 M0R143 59 aa11.78□□□□□ -0.52
PPFIA3-204ENST00000602492 RPL24P83731 157 aaKnown RBP11.78□□□□□ -0.52
PPFIA3-204ENST00000602492 LINC00304Q8N9R0 145 aa11.78□□□□□ -0.52
PPFIA3-204ENST00000602492 RETNLBQ9BQ08 111 aa11.78□□□□□ -0.52
PPFIA3-204ENST00000602492 A0A0U1RRA0 63 aa11.77□□□□□ -0.53
PPFIA3-204ENST00000602492 CEND1Q8N111 149 aa11.77□□□□□ -0.53
PPFIA3-204ENST00000602492 MUC17Q685J3 4493 aa11.77□□□□□ -0.53
PPFIA3-204ENST00000602492 TMEM238LA0A1B0GVL6 79 aa11.76□□□□□ -0.53
PPFIA3-204ENST00000602492 A6NJY4 79 aa11.76□□□□□ -0.53
PPFIA3-204ENST00000602492 CTAG1AP78358 180 aa11.76□□□□□ -0.53
PPFIA3-204ENST00000602492 DAND5Q8N907 189 aa11.76□□□□□ -0.53
PPFIA3-204ENST00000602492 IGKV2-28A0A075B6P5 120 aa11.75□□□□□ -0.53
PPFIA3-204ENST00000602492 NDUFC2O95298 119 aa11.75□□□□□ -0.53
PPFIA3-204ENST00000602492 IGKV2D-28P01615 120 aa11.75□□□□□ -0.53
PPFIA3-204ENST00000602492 LCE2AQ5TA79 106 aaPredicted RBP11.74□□□□□ -0.53
PPFIA3-204ENST00000602492 MUSTN1Q8IVN3 82 aa11.74□□□□□ -0.53
PPFIA3-204ENST00000602492 SOSTDC1Q6X4U4 206 aa11.73□□□□□ -0.53
PPFIA3-204ENST00000602492 CDIP1Q9H305 208 aa11.72□□□□□ -0.53
PPFIA3-204ENST00000602492 PRLHP81277 87 aa11.71□□□□□ -0.53
PPFIA3-204ENST00000602492 TPRXLQ17RH7 258 aa11.71□□□□□ -0.53
PPFIA3-204ENST00000602492 BVES-AS1Q5T3Y7 98 aa11.71□□□□□ -0.53
PPFIA3-204ENST00000602492 FAM19A1Q7Z5A9 133 aa11.7□□□□□ -0.54
PPFIA3-204ENST00000602492 IGLV7-46A0A075B6I9 117 aa11.69□□□□□ -0.54
PPFIA3-204ENST00000602492 PCP4L1A6NKN8 68 aa11.69□□□□□ -0.54
PPFIA3-204ENST00000602492 TRBV10-2A0A0K0K1G8 114 aa11.68□□□□□ -0.54
PPFIA3-204ENST00000602492 A4D1N5 150 aa11.68□□□□□ -0.54
PPFIA3-204ENST00000602492 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
PPFIA3-204ENST00000602492 FXYD2P54710 66 aa11.68□□□□□ -0.54
PPFIA3-204ENST00000602492 TMEM126AQ9H061 195 aa11.68□□□□□ -0.54
PPFIA3-204ENST00000602492 A0A0B4J2C4 111 aa11.67□□□□□ -0.54
PPFIA3-204ENST00000602492 VPREB1P12018 145 aa11.67□□□□□ -0.54
PPFIA3-204ENST00000602492 NPC2P61916 151 aa11.67□□□□□ -0.54
PPFIA3-204ENST00000602492 A0A1B0GWB2 263 aa11.66□□□□□ -0.54
PPFIA3-204ENST00000602492 A6NDN8 102 aa11.65□□□□□ -0.54
PPFIA3-204ENST00000602492 HINT1P49773 126 aaPredicted RBP11.65□□□□□ -0.54
PPFIA3-204ENST00000602492 TRAV13-2A0A0B4J235 113 aa11.63□□□□□ -0.55
PPFIA3-204ENST00000602492 M0R378 163 aa11.63□□□□□ -0.55
PPFIA3-204ENST00000602492 CFC1BP0CG36 223 aa11.61□□□□□ -0.55
PPFIA3-204ENST00000602492 CFC1P0CG37 223 aa11.61□□□□□ -0.55
PPFIA3-204ENST00000602492 C3orf22Q8N5N4 141 aa11.61□□□□□ -0.55
PPFIA3-204ENST00000602492 CBY1Q9Y3M2 126 aa11.61□□□□□ -0.55
PPFIA3-204ENST00000602492 Q8NDZ9 215 aa11.6□□□□□ -0.55
PPFIA3-204ENST00000602492 SNHG12Q9BXW3 62 aa11.6□□□□□ -0.55
PPFIA3-204ENST00000602492 NHP2Q9NX24 153 aaKnown RBP11.6□□□□□ -0.55
PPFIA3-204ENST00000602492 RAB37Q96AX2 223 aa11.59□□□□□ -0.55
PPFIA3-204ENST00000602492 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
PPFIA3-204ENST00000602492 SPAG11AQ6PDA7 123 aa11.58□□□□□ -0.56
PPFIA3-204ENST00000602492 PRO1854Q9UHT4 67 aa11.58□□□□□ -0.56
PPFIA3-204ENST00000602492 LINC00337Q8N6G1 96 aa11.57□□□□□ -0.56
PPFIA3-204ENST00000602492 IGLV6-57P01721 117 aa11.56□□□□□ -0.56
PPFIA3-204ENST00000602492 BATFQ16520 125 aa11.56□□□□□ -0.56
PPFIA3-204ENST00000602492 NCR3O14931 201 aa11.55□□□□□ -0.56
PPFIA3-204ENST00000602492 COL5A1-AS1Q5SY13 56 aa11.54□□□□□ -0.56
PPFIA3-204ENST00000602492 S100A7L2Q5SY68 101 aa11.54□□□□□ -0.56
PPFIA3-204ENST00000602492 SPRR4Q96PI1 79 aa11.54□□□□□ -0.56
PPFIA3-204ENST00000602492 C4orf48Q5BLP8 95 aa11.53□□□□□ -0.56
PPFIA3-204ENST00000602492 FP248Q71RG6 208 aaPredicted RBP11.53□□□□□ -0.56
PPFIA3-204ENST00000602492 KRTAP9-6A0A140TA67 174 aa11.52□□□□□ -0.57
PPFIA3-204ENST00000602492 ZNF706Q9Y5V0 76 aaPredicted RBP11.52□□□□□ -0.57
PPFIA3-204ENST00000602492 OR13C6PQ8NH95 151 aa11.51□□□□□ -0.57
PPFIA3-204ENST00000602492 TRBV10-3A0A0K0K1G6 114 aa11.5□□□□□ -0.57
PPFIA3-204ENST00000602492 K7ERJ3 54 aa11.5□□□□□ -0.57
PPFIA3-204ENST00000602492 KCNQ1DNQ9H478 68 aa11.49□□□□□ -0.57
PPFIA3-204ENST00000602492 PRYO14603 147 aa11.48□□□□□ -0.57
PPFIA3-204ENST00000602492 Q8NBF4 154 aa11.47□□□□□ -0.57
PPFIA3-204ENST00000602492 TRAV23DV6A0A075B6W5 121 aa11.46□□□□□ -0.57
PPFIA3-204ENST00000602492 Q1RN00 199 aa11.45□□□□□ -0.58
PPFIA3-204ENST00000602492 TRBV7-6A0A0J9YX20 115 aa11.44□□□□□ -0.58
PPFIA3-204ENST00000602492 TAX1BP3O14907 124 aa11.44□□□□□ -0.58
PPFIA3-204ENST00000602492 KRTAP13-3Q3SY46 172 aa11.44□□□□□ -0.58
PPFIA3-204ENST00000602492 SMIM11BQ8TCY0 68 aa11.44□□□□□ -0.58
PPFIA3-204ENST00000602492 SPRR1AP35321 89 aa11.43□□□□□ -0.58
PPFIA3-204ENST00000602492 C9orf118A6NHY6 69 aa11.42□□□□□ -0.58
PPFIA3-204ENST00000602492 ZNF73O43830 326 aaPredicted RBP11.42□□□□□ -0.58
PPFIA3-204ENST00000602492 ASB16-AS1Q495Z4 193 aa11.42□□□□□ -0.58
PPFIA3-204ENST00000602492 LYRM7Q5U5X0 104 aa11.42□□□□□ -0.58
PPFIA3-204ENST00000602492 SMCR5Q8TEV8 140 aa11.42□□□□□ -0.58
PPFIA3-204ENST00000602492 ETDCA0A1B0GVM5 59 aa11.41□□□□□ -0.58
PPFIA3-204ENST00000602492 H7C2G1 150 aa11.41□□□□□ -0.58
PPFIA3-204ENST00000602492 SPINK1P00995 79 aa11.41□□□□□ -0.58
PPFIA3-204ENST00000602492 COX6CP09669 75 aa11.41□□□□□ -0.58
PPFIA3-204ENST00000602492 H0YGX0 51 aa11.39□□□□□ -0.59
PPFIA3-204ENST00000602492 VAMP3Q15836 100 aa11.39□□□□□ -0.59
PPFIA3-204ENST00000602492 C6orf99Q4VX62 202 aa11.39□□□□□ -0.59
PPFIA3-204ENST00000602492 PSMB2P49721 201 aa11.38□□□□□ -0.59
PPFIA3-204ENST00000602492 KRTAP4-16G5E9R7 235 aaPredicted RBP11.37□□□□□ -0.59
PPFIA3-204ENST00000602492 TRIAP1O43715 76 aa11.37□□□□□ -0.59
PPFIA3-204ENST00000602492 LINC01547P58512 204 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 228.5 ms