RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
SRRM1-223ENST00000600523 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
SRRM1-223ENST00000600523 A6NDN8 102 aa7.84□□□□□ -1.15
SRRM1-223ENST00000600523 DLEU1O43261 78 aa7.84□□□□□ -1.15
SRRM1-223ENST00000600523 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
SRRM1-223ENST00000600523 ZNF73O43830 326 aaPredicted RBP7.83□□□□□ -1.16
SRRM1-223ENST00000600523 HIST1H4GQ99525 98 aa7.83□□□□□ -1.16
SRRM1-223ENST00000600523 PKHD1L1Q86WI1 4243 aa7.83□□□□□ -1.16
SRRM1-223ENST00000600523 TRAV13-2A0A0B4J235 113 aa7.82□□□□□ -1.16
SRRM1-223ENST00000600523 CRYGAP11844 174 aa7.82□□□□□ -1.16
SRRM1-223ENST00000600523 SLC25A34Q6PIV7 304 aa7.82□□□□□ -1.16
SRRM1-223ENST00000600523 C14orf144Q96I85 54 aa7.82□□□□□ -1.16
SRRM1-223ENST00000600523 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
SRRM1-223ENST00000600523 Q6ZRX8 168 aa7.81□□□□□ -1.16
SRRM1-223ENST00000600523 PRR26Q8N8Z3 221 aa7.81□□□□□ -1.16
SRRM1-223ENST00000600523 B5MCH6 92 aa7.8□□□□□ -1.16
SRRM1-223ENST00000600523 KRTAP1-4P0C5Y4 121 aa7.8□□□□□ -1.16
SRRM1-223ENST00000600523 KRTAP10-8P60410 259 aa7.8□□□□□ -1.16
SRRM1-223ENST00000600523 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
SRRM1-223ENST00000600523 KRTAP4-16G5E9R7 235 aaPredicted RBP7.79□□□□□ -1.16
SRRM1-223ENST00000600523 PYY3Q5JQD4 70 aa7.78□□□□□ -1.16
SRRM1-223ENST00000600523 SMCR5Q8TEV8 140 aa7.78□□□□□ -1.16
SRRM1-223ENST00000600523 HIGD1BQ9P298 99 aa7.78□□□□□ -1.16
SRRM1-223ENST00000600523 DHRS4-AS1Q9P1J3 65 aa7.77□□□□□ -1.17
SRRM1-223ENST00000600523 A4D1N5 150 aa7.76□□□□□ -1.17
SRRM1-223ENST00000600523 C6orf99Q4VX62 202 aa7.76□□□□□ -1.17
SRRM1-223ENST00000600523 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
SRRM1-223ENST00000600523 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
SRRM1-223ENST00000600523 TRBV7-6A0A0J9YX20 115 aa7.75□□□□□ -1.17
SRRM1-223ENST00000600523 COX7BP24311 80 aa7.75□□□□□ -1.17
SRRM1-223ENST00000600523 VAMP3Q15836 100 aa7.75□□□□□ -1.17
SRRM1-223ENST00000600523 SPRR4Q96PI1 79 aa7.75□□□□□ -1.17
SRRM1-223ENST00000600523 TMEM238LA0A1B0GVL6 79 aa7.74□□□□□ -1.17
SRRM1-223ENST00000600523 A0A1B0GWB2 263 aa7.74□□□□□ -1.17
SRRM1-223ENST00000600523 A6NJY4 79 aa7.74□□□□□ -1.17
SRRM1-223ENST00000600523 FAT3Q8TDW7 4589 aa7.74□□□□□ -1.17
SRRM1-223ENST00000600523 TAL2Q16559 108 aa7.73□□□□□ -1.17
SRRM1-223ENST00000600523 GAGE2AQ6NT46 116 aa7.73□□□□□ -1.17
SRRM1-223ENST00000600523 Q9BRP9 147 aa7.73□□□□□ -1.17
SRRM1-223ENST00000600523 ANAPC11Q9NYG5 84 aa7.73□□□□□ -1.17
SRRM1-223ENST00000600523 A0A087X002 238 aa7.72□□□□□ -1.17
SRRM1-223ENST00000600523 ELOF1P60002 83 aaKnown RBP7.72□□□□□ -1.17
SRRM1-223ENST00000600523 RAB37Q96AX2 223 aa7.72□□□□□ -1.17
SRRM1-223ENST00000600523 NHP2Q9NX24 153 aaKnown RBP7.72□□□□□ -1.17
SRRM1-223ENST00000600523 SLC25A20O43772 301 aa7.71□□□□□ -1.18
SRRM1-223ENST00000600523 C4orf48Q5BLP8 95 aa7.71□□□□□ -1.18
SRRM1-223ENST00000600523 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
SRRM1-223ENST00000600523 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
SRRM1-223ENST00000600523 C12orf57Q99622 126 aa7.7□□□□□ -1.18
SRRM1-223ENST00000600523 ERC2-IT1O76042 136 aa7.69□□□□□ -1.18
SRRM1-223ENST00000600523 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
SRRM1-223ENST00000600523 CEND1Q8N111 149 aa7.69□□□□□ -1.18
SRRM1-223ENST00000600523 LINC00483Q53H64 154 aa7.68□□□□□ -1.18
SRRM1-223ENST00000600523 BVES-AS1Q5T3Y7 98 aa7.68□□□□□ -1.18
SRRM1-223ENST00000600523 SNCGO76070 127 aa7.67□□□□□ -1.18
SRRM1-223ENST00000600523 HSD52Q0P140 79 aa7.67□□□□□ -1.18
SRRM1-223ENST00000600523 A0A0B4J2C4 111 aa7.66□□□□□ -1.18
SRRM1-223ENST00000600523 SMIM6P0DI80 62 aa7.66□□□□□ -1.18
SRRM1-223ENST00000600523 Q1RN00 199 aa7.66□□□□□ -1.18
SRRM1-223ENST00000600523 KRTAP13-2Q52LG2 175 aa7.66□□□□□ -1.18
SRRM1-223ENST00000600523 LINC00304Q8N9R0 145 aa7.66□□□□□ -1.18
SRRM1-223ENST00000600523 H7C2G1 150 aa7.65□□□□□ -1.18
SRRM1-223ENST00000600523 CFC1BP0CG36 223 aa7.65□□□□□ -1.18
SRRM1-223ENST00000600523 CFC1P0CG37 223 aa7.65□□□□□ -1.18
SRRM1-223ENST00000600523 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
SRRM1-223ENST00000600523 IGLV9-49A0A0B4J1Y8 123 aa7.64□□□□□ -1.19
SRRM1-223ENST00000600523 C3orf22Q8N5N4 141 aa7.64□□□□□ -1.19
SRRM1-223ENST00000600523 ST20-AS1Q8NBB2 130 aa7.64□□□□□ -1.19
SRRM1-223ENST00000600523 LAMTOR3Q9UHA4 124 aa7.64□□□□□ -1.19
SRRM1-223ENST00000600523 PRO1854Q9UHT4 67 aa7.64□□□□□ -1.19
SRRM1-223ENST00000600523 TSPAN13O95857 204 aa7.63□□□□□ -1.19
SRRM1-223ENST00000600523 CTAG1AP78358 180 aa7.63□□□□□ -1.19
SRRM1-223ENST00000600523 C9orf153Q5TBE3 101 aa7.63□□□□□ -1.19
SRRM1-223ENST00000600523 DEFB105AQ8NG35 78 aa7.63□□□□□ -1.19
SRRM1-223ENST00000600523 TNXBP22105 4242 aa7.62□□□□□ -1.19
SRRM1-223ENST00000600523 TEX49A0A1B0GTD5 131 aa7.62□□□□□ -1.19
SRRM1-223ENST00000600523 MOBPQ13875 183 aa7.62□□□□□ -1.19
SRRM1-223ENST00000600523 SSBP3-AS1Q7Z2R9 100 aa7.62□□□□□ -1.19
SRRM1-223ENST00000600523 SPRR1BP22528 89 aa7.61□□□□□ -1.19
SRRM1-223ENST00000600523 HERC1Q15751 4861 aa7.6□□□□□ -1.19
SRRM1-223ENST00000600523 hADV29S1A0JD25 119 aa7.6□□□□□ -1.19
SRRM1-223ENST00000600523 H0YGX0 51 aa7.6□□□□□ -1.19
SRRM1-223ENST00000600523 FXYD2P54710 66 aa7.6□□□□□ -1.19
SRRM1-223ENST00000600523 LINC00575Q6W349 94 aa7.6□□□□□ -1.19
SRRM1-223ENST00000600523 Q8NBF4 154 aa7.6□□□□□ -1.19
SRRM1-223ENST00000600523 LCE2DQ5TA82 110 aaPredicted RBP7.59□□□□□ -1.19
SRRM1-223ENST00000600523 PRO1933Q9H354 126 aa7.59□□□□□ -1.19
SRRM1-223ENST00000600523 TSTD3H0UI37 97 aa7.58□□□□□ -1.2
SRRM1-223ENST00000600523 F8WEM9 126 aa7.57□□□□□ -1.2
SRRM1-223ENST00000600523 M0R143 59 aa7.57□□□□□ -1.2
SRRM1-223ENST00000600523 SPINK1P00995 79 aa7.57□□□□□ -1.2
SRRM1-223ENST00000600523 GHRHP01286 108 aa7.57□□□□□ -1.2
SRRM1-223ENST00000600523 COX6CP09669 75 aa7.57□□□□□ -1.2
SRRM1-223ENST00000600523 IGLV5-48A0A075B6I7 105 aa7.56□□□□□ -1.2
SRRM1-223ENST00000600523 PSMB2P49721 201 aa7.56□□□□□ -1.2
SRRM1-223ENST00000600523 PRR4Q16378 134 aa7.56□□□□□ -1.2
SRRM1-223ENST00000600523 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.56□□□□□ -1.2
SRRM1-223ENST00000600523 Q6ZQY7 126 aa7.55□□□□□ -1.2
SRRM1-223ENST00000600523 OCIAD2Q56VL3 154 aa7.54□□□□□ -1.2
SRRM1-223ENST00000600523 PPDPFLQ8WWR9 84 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms