RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SMCR5Q8TEV8 140 aa16.62■□□□□ 0.25
SSBP4-206ENST00000599699 ZNF706Q9Y5V0 76 aaPredicted RBP16.62■□□□□ 0.25
SSBP4-206ENST00000599699 B5MCH6 92 aa16.61■□□□□ 0.25
SSBP4-206ENST00000599699 KRTAP13-2Q52LG2 175 aa16.61■□□□□ 0.25
SSBP4-206ENST00000599699 SPRR4Q96PI1 79 aa16.6■□□□□ 0.25
SSBP4-206ENST00000599699 SPANXDQ9BXN6 97 aa16.6■□□□□ 0.25
SSBP4-206ENST00000599699 CBY1Q9Y3M2 126 aa16.59■□□□□ 0.25
SSBP4-206ENST00000599699 C5orf52A6NGY3 159 aa16.57■□□□□ 0.24
SSBP4-206ENST00000599699 COPS9Q8WXC6 57 aa16.57■□□□□ 0.24
SSBP4-206ENST00000599699 ZNF73O43830 326 aaPredicted RBP16.56■□□□□ 0.24
SSBP4-206ENST00000599699 TSPAN13O95857 204 aa16.56■□□□□ 0.24
SSBP4-206ENST00000599699 SCGB1D1O95968 90 aa16.56■□□□□ 0.24
SSBP4-206ENST00000599699 Q6ZRX8 168 aa16.55■□□□□ 0.24
SSBP4-206ENST00000599699 LINC00518Q8N0U6 118 aa16.55■□□□□ 0.24
SSBP4-206ENST00000599699 IFITM1P13164 125 aa16.53■□□□□ 0.24
SSBP4-206ENST00000599699 HINT1P49773 126 aaPredicted RBP16.52■□□□□ 0.24
SSBP4-206ENST00000599699 JOSD1Q15040 202 aaPredicted RBP16.52■□□□□ 0.24
SSBP4-206ENST00000599699 Q6ZVH6 145 aa16.52■□□□□ 0.24
SSBP4-206ENST00000599699 PPDPFQ9H3Y8 114 aa16.52■□□□□ 0.24
SSBP4-206ENST00000599699 Q9BRP9 147 aa16.51■□□□□ 0.23
SSBP4-206ENST00000599699 ERC2-IT1O76042 136 aa16.49■□□□□ 0.23
SSBP4-206ENST00000599699 MUSTN1Q8IVN3 82 aa16.49■□□□□ 0.23
SSBP4-206ENST00000599699 C3orf22Q8N5N4 141 aa16.49■□□□□ 0.23
SSBP4-206ENST00000599699 LINC00304Q8N9R0 145 aa16.48■□□□□ 0.23
SSBP4-206ENST00000599699 GAGE2AQ6NT46 116 aa16.47■□□□□ 0.23
SSBP4-206ENST00000599699 PRR4Q16378 134 aa16.43■□□□□ 0.22
SSBP4-206ENST00000599699 UBR4Q5T4S7 5183 aa16.42■□□□□ 0.22
SSBP4-206ENST00000599699 A6NDN8 102 aa16.42■□□□□ 0.22
SSBP4-206ENST00000599699 LRP2P98164 4655 aa16.41■□□□□ 0.22
SSBP4-206ENST00000599699 LINC00483Q53H64 154 aa16.41■□□□□ 0.22
SSBP4-206ENST00000599699 C6orf99Q4VX62 202 aa16.38■□□□□ 0.21
SSBP4-206ENST00000599699 COX7BP24311 80 aa16.36■□□□□ 0.21
SSBP4-206ENST00000599699 DHRS4-AS1Q9P1J3 65 aa16.35■□□□□ 0.21
SSBP4-206ENST00000599699 IGLV9-49A0A0B4J1Y8 123 aa16.34■□□□□ 0.21
SSBP4-206ENST00000599699 ST20-AS1Q8NBB2 130 aa16.34■□□□□ 0.21
SSBP4-206ENST00000599699 TRAV13-2A0A0B4J235 113 aa16.33■□□□□ 0.2
SSBP4-206ENST00000599699 C4orf48Q5BLP8 95 aa16.33■□□□□ 0.2
SSBP4-206ENST00000599699 ELOF1P60002 83 aaKnown RBP16.32■□□□□ 0.2
SSBP4-206ENST00000599699 Q8NBF4 154 aa16.32■□□□□ 0.2
SSBP4-206ENST00000599699 COX8AP10176 69 aa16.31■□□□□ 0.2
SSBP4-206ENST00000599699 SPAG11AQ6PDA7 123 aa16.31■□□□□ 0.2
SSBP4-206ENST00000599699 MOBPQ13875 183 aa16.3■□□□□ 0.2
SSBP4-206ENST00000599699 PAM16Q9Y3D7 125 aa16.29■□□□□ 0.2
SSBP4-206ENST00000599699 TRBV7-6A0A0J9YX20 115 aa16.27■□□□□ 0.2
SSBP4-206ENST00000599699 CTAG1AP78358 180 aa16.27■□□□□ 0.2
SSBP4-206ENST00000599699 HIST1H4GQ99525 98 aa16.27■□□□□ 0.2
SSBP4-206ENST00000599699 RETNLBQ9BQ08 111 aa16.27■□□□□ 0.2
SSBP4-206ENST00000599699 A4D1N5 150 aa16.26■□□□□ 0.19
SSBP4-206ENST00000599699 SPATA45Q537H7 98 aa16.26■□□□□ 0.19
SSBP4-206ENST00000599699 VAMP8Q9BV40 100 aa16.26■□□□□ 0.19
SSBP4-206ENST00000599699 C14orf144Q96I85 54 aa16.25■□□□□ 0.19
SSBP4-206ENST00000599699 A0A1B0GWB2 263 aa16.24■□□□□ 0.19
SSBP4-206ENST00000599699 DLEU1O43261 78 aa16.24■□□□□ 0.19
SSBP4-206ENST00000599699 C9orf153Q5TBE3 101 aa16.23■□□□□ 0.19
SSBP4-206ENST00000599699 SSBP3-AS1Q7Z2R9 100 aa16.23■□□□□ 0.19
SSBP4-206ENST00000599699 SMIM11BQ8TCY0 68 aa16.23■□□□□ 0.19
SSBP4-206ENST00000599699 LPAP08519 4548 aa16.22■□□□□ 0.19
SSBP4-206ENST00000599699 TMA7Q9Y2S6 64 aaKnown RBP16.22■□□□□ 0.19
SSBP4-206ENST00000599699 SLC25A34Q6PIV7 304 aa16.19■□□□□ 0.18
SSBP4-206ENST00000599699 TAL2Q16559 108 aa16.18■□□□□ 0.18
SSBP4-206ENST00000599699 DEFB105AQ8NG35 78 aa16.18■□□□□ 0.18
SSBP4-206ENST00000599699 C12orf57Q99622 126 aa16.18■□□□□ 0.18
SSBP4-206ENST00000599699 SPINK1P00995 79 aa16.16■□□□□ 0.18
SSBP4-206ENST00000599699 SPRR1BP22528 89 aa16.16■□□□□ 0.18
SSBP4-206ENST00000599699 VAMP3Q15836 100 aa16.14■□□□□ 0.17
SSBP4-206ENST00000599699 LAMTOR3Q9UHA4 124 aa16.14■□□□□ 0.17
SSBP4-206ENST00000599699 NHP2Q9NX24 153 aaKnown RBP16.12■□□□□ 0.17
SSBP4-206ENST00000599699 HIGD1BQ9P298 99 aa16.12■□□□□ 0.17
SSBP4-206ENST00000599699 TEX49A0A1B0GTD5 131 aa16.1■□□□□ 0.17
SSBP4-206ENST00000599699 IGLV7-46A0A075B6I9 117 aa16.09■□□□□ 0.17
SSBP4-206ENST00000599699 SLC25A20O43772 301 aa16.09■□□□□ 0.17
SSBP4-206ENST00000599699 Q1RN00 199 aa16.08■□□□□ 0.16
SSBP4-206ENST00000599699 PYY3Q5JQD4 70 aa16.07■□□□□ 0.16
SSBP4-206ENST00000599699 C2orf91Q6ZV80 131 aa16.06■□□□□ 0.16
SSBP4-206ENST00000599699 RAB37Q96AX2 223 aa16.03■□□□□ 0.16
SSBP4-206ENST00000599699 H7C2G1 150 aa16.02■□□□□ 0.16
SSBP4-206ENST00000599699 RPS29P62273 56 aaKnown RBP16.02■□□□□ 0.16
SSBP4-206ENST00000599699 LINC00575Q6W349 94 aa16.02■□□□□ 0.16
SSBP4-206ENST00000599699 IGLV5-48A0A075B6I7 105 aa16.01■□□□□ 0.15
SSBP4-206ENST00000599699 CFC1BP0CG36 223 aa16.01■□□□□ 0.15
SSBP4-206ENST00000599699 CFC1P0CG37 223 aa16.01■□□□□ 0.15
SSBP4-206ENST00000599699 LINC01547P58512 204 aaPredicted RBP16■□□□□ 0.15
SSBP4-206ENST00000599699 FP248Q71RG6 208 aaPredicted RBP16■□□□□ 0.15
SSBP4-206ENST00000599699 RNF213Q63HN8 5207 aa16■□□□□ 0.15
SSBP4-206ENST00000599699 hADV29S1A0JD25 119 aa15.98■□□□□ 0.15
SSBP4-206ENST00000599699 BVES-AS1Q5T3Y7 98 aa15.98■□□□□ 0.15
SSBP4-206ENST00000599699 HRCT1Q6UXD1 115 aa15.98■□□□□ 0.15
SSBP4-206ENST00000599699 TPRXLQ17RH7 258 aa15.97■□□□□ 0.15
SSBP4-206ENST00000599699 SMIM29Q86T20 159 aa15.97■□□□□ 0.15
SSBP4-206ENST00000599699 CEND1Q8N111 149 aa15.97■□□□□ 0.15
SSBP4-206ENST00000599699 Q8N377 158 aa15.97■□□□□ 0.15
SSBP4-206ENST00000599699 CDIP1Q9H305 208 aa15.96■□□□□ 0.15
SSBP4-206ENST00000599699 PRO1933Q9H354 126 aa15.95■□□□□ 0.14
SSBP4-206ENST00000599699 A0A0B4J2C4 111 aa15.94■□□□□ 0.14
SSBP4-206ENST00000599699 TMEM238LA0A1B0GVL6 79 aa15.93■□□□□ 0.14
SSBP4-206ENST00000599699 A6NJY4 79 aa15.93■□□□□ 0.14
SSBP4-206ENST00000599699 Q6ZQY7 126 aa15.93■□□□□ 0.14
SSBP4-206ENST00000599699 LIMD2Q9BT23 127 aa15.88■□□□□ 0.13
SSBP4-206ENST00000599699 F8WEM9 126 aa15.87■□□□□ 0.13
SSBP4-206ENST00000599699 FXYD2P54710 66 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms