RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 LINC00474Q9P2X8 69 aa11.43□□□□□ -0.58
SHKBP1-205ENST00000594973 HAMPP81172 84 aa11.43□□□□□ -0.58
SHKBP1-205ENST00000594973 ERC2-IT1O76042 136 aa11.42□□□□□ -0.58
SHKBP1-205ENST00000594973 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
SHKBP1-205ENST00000594973 BRK1Q8WUW1 75 aa11.42□□□□□ -0.58
SHKBP1-205ENST00000594973 H3BQ85 93 aa11.42□□□□□ -0.58
SHKBP1-205ENST00000594973 LINC00575Q6W349 94 aa11.41□□□□□ -0.58
SHKBP1-205ENST00000594973 HUWE1Q7Z6Z7 4374 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-205ENST00000594973 C10orf25Q5T742 122 aa11.4□□□□□ -0.58
SHKBP1-205ENST00000594973 UNQ6190/PRO20217Q6UXQ8 127 aa11.4□□□□□ -0.58
SHKBP1-205ENST00000594973 SEC61GP60059 68 aa11.4□□□□□ -0.59
SHKBP1-205ENST00000594973 TM2D3Q9BRN9 247 aa11.38□□□□□ -0.59
SHKBP1-205ENST00000594973 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-205ENST00000594973 COX17Q14061 63 aa11.37□□□□□ -0.59
SHKBP1-205ENST00000594973 LAMTOR3Q9UHA4 124 aa11.37□□□□□ -0.59
SHKBP1-205ENST00000594973 C6orf99Q4VX62 202 aa11.37□□□□□ -0.59
SHKBP1-205ENST00000594973 MDFIQ99750 246 aa11.36□□□□□ -0.59
SHKBP1-205ENST00000594973 M0R2N4 97 aa11.35□□□□□ -0.59
SHKBP1-205ENST00000594973 NREPQ16612 68 aa11.35□□□□□ -0.59
SHKBP1-205ENST00000594973 TMEM254Q8TBM7 123 aa11.35□□□□□ -0.59
SHKBP1-205ENST00000594973 COL7A1Q02388 2944 aa11.34□□□□□ -0.59
SHKBP1-205ENST00000594973 STAB2Q8WWQ8 2551 aa11.34□□□□□ -0.59
SHKBP1-205ENST00000594973 HIGD2BQ4VC39 106 aa11.34□□□□□ -0.59
SHKBP1-205ENST00000594973 A0A0U1RQV1 116 aa11.32□□□□□ -0.6
SHKBP1-205ENST00000594973 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
SHKBP1-205ENST00000594973 KRTAP26-1Q6PEX3 210 aa11.31□□□□□ -0.6
SHKBP1-205ENST00000594973 IGKV2D-24A0A075B6R9 120 aa11.3□□□□□ -0.6
SHKBP1-205ENST00000594973 Q8NDZ9 215 aa11.3□□□□□ -0.6
SHKBP1-205ENST00000594973 MUC7Q8TAX7 377 aa11.3□□□□□ -0.6
SHKBP1-205ENST00000594973 BPY2O14599 106 aa11.29□□□□□ -0.6
SHKBP1-205ENST00000594973 C6orf48Q9UBA6 75 aa11.29□□□□□ -0.6
SHKBP1-205ENST00000594973 FAM229BQ4G0N7 80 aa11.28□□□□□ -0.6
SHKBP1-205ENST00000594973 LINC00588Q9Y4M8 146 aa11.28□□□□□ -0.6
SHKBP1-205ENST00000594973 LYSTQ99698 3801 aa11.28□□□□□ -0.6
SHKBP1-205ENST00000594973 CAMK2N2Q96S95 79 aa11.27□□□□□ -0.6
SHKBP1-205ENST00000594973 PRYO14603 147 aa11.26□□□□□ -0.61
SHKBP1-205ENST00000594973 C15orf56Q8N910 161 aa11.26□□□□□ -0.61
SHKBP1-205ENST00000594973 MPLKIPQ8TAP9 179 aa11.26□□□□□ -0.61
SHKBP1-205ENST00000594973 DNAH10OSP0CZ25 163 aa11.25□□□□□ -0.61
SHKBP1-205ENST00000594973 XAGE1AQ9HD64 81 aa11.25□□□□□ -0.61
SHKBP1-205ENST00000594973 GVQW2A0A096LPI5 108 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-205ENST00000594973 FUSP35637 526 aaKnown RBP eCLIP11.25□□□□□ -0.61
SHKBP1-205ENST00000594973 Q6ZQY7 126 aa11.24□□□□□ -0.61
SHKBP1-205ENST00000594973 Q6ZRU5 148 aa11.23□□□□□ -0.61
SHKBP1-205ENST00000594973 PRR15Q8IV56 129 aa11.22□□□□□ -0.61
SHKBP1-205ENST00000594973 OCR1Q9BZK8 76 aa11.22□□□□□ -0.61
SHKBP1-205ENST00000594973 DNAH9Q9NYC9 4486 aa11.22□□□□□ -0.61
SHKBP1-205ENST00000594973 IGLV6-57P01721 117 aa11.21□□□□□ -0.61
SHKBP1-205ENST00000594973 SCXQ7RTU7 201 aa11.21□□□□□ -0.61
SHKBP1-205ENST00000594973 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.21□□□□□ -0.62
SHKBP1-205ENST00000594973 TENM2Q9NT68 2774 aa11.18□□□□□ -0.62
SHKBP1-205ENST00000594973 COX7BP24311 80 aa11.17□□□□□ -0.62
SHKBP1-205ENST00000594973 DNAH1Q9P2D7 4330 aa11.17□□□□□ -0.62
SHKBP1-205ENST00000594973 IGKV4-1P06312 121 aa11.17□□□□□ -0.62
SHKBP1-205ENST00000594973 CASC10Q5T4H9 136 aa11.15□□□□□ -0.62
SHKBP1-205ENST00000594973 CSMD3Q7Z407 3707 aa11.15□□□□□ -0.63
SHKBP1-205ENST00000594973 PMAIP1Q13794 54 aa11.14□□□□□ -0.63
SHKBP1-205ENST00000594973 SYCNQ0VAF6 134 aa11.14□□□□□ -0.63
SHKBP1-205ENST00000594973 Q1T7F1 81 aa11.14□□□□□ -0.63
SHKBP1-205ENST00000594973 DIRC1Q969H9 104 aa11.14□□□□□ -0.63
SHKBP1-205ENST00000594973 hDV103S1A0JD37 113 aa11.13□□□□□ -0.63
SHKBP1-205ENST00000594973 Q6ZRP5 223 aa11.13□□□□□ -0.63
SHKBP1-205ENST00000594973 B9D2Q9BPU9 175 aa11.11□□□□□ -0.63
SHKBP1-205ENST00000594973 HIGD2AQ9BW72 106 aa11.1□□□□□ -0.63
SHKBP1-205ENST00000594973 VPREB1P12018 145 aa11.09□□□□□ -0.63
SHKBP1-205ENST00000594973 DNAH7Q8WXX0 4024 aa11.09□□□□□ -0.63
SHKBP1-205ENST00000594973 DNAH10Q8IVF4 4471 aa11.08□□□□□ -0.64
SHKBP1-205ENST00000594973 LCE6AA0A183 80 aa11.08□□□□□ -0.64
SHKBP1-205ENST00000594973 ELOF1P60002 83 aaKnown RBP11.08□□□□□ -0.64
SHKBP1-205ENST00000594973 Q8N9L7 120 aa11.07□□□□□ -0.64
SHKBP1-205ENST00000594973 ZNF73O43830 326 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-205ENST00000594973 UBE2DNLQ8IWF7 75 aa11.06□□□□□ -0.64
SHKBP1-205ENST00000594973 KRTAP1-5Q9BYS1 174 aa11.05□□□□□ -0.64
SHKBP1-205ENST00000594973 PRKDCP78527 4128 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-205ENST00000594973 MEGF8Q7Z7M0 2845 aa11.05□□□□□ -0.64
SHKBP1-205ENST00000594973 DNHD1Q96M86 4753 aa11.04□□□□□ -0.64
SHKBP1-205ENST00000594973 APLNQ9ULZ1 77 aa11.04□□□□□ -0.64
SHKBP1-205ENST00000594973 M0R378 163 aa11.03□□□□□ -0.64
SHKBP1-205ENST00000594973 DYNC2H1Q8NCM8 4307 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-205ENST00000594973 PLECQ15149 4684 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-205ENST00000594973 C1orf64Q8NEQ6 169 aa11.01□□□□□ -0.65
SHKBP1-205ENST00000594973 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
SHKBP1-205ENST00000594973 A0A1B0GW54 56 aa10.99□□□□□ -0.65
SHKBP1-205ENST00000594973 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
SHKBP1-205ENST00000594973 ZCCHC13Q8WW36 166 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-205ENST00000594973 CYP4F30PQ9H0H9 118 aa10.98□□□□□ -0.65
SHKBP1-205ENST00000594973 FAM168BA1KXE4 195 aa10.97□□□□□ -0.65
SHKBP1-205ENST00000594973 TLX1NBP0CAT3 122 aa10.97□□□□□ -0.65
SHKBP1-205ENST00000594973 PSCAO43653 123 aa10.97□□□□□ -0.65
SHKBP1-205ENST00000594973 SMIM29Q86T20 159 aa10.96□□□□□ -0.65
SHKBP1-205ENST00000594973 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
SHKBP1-205ENST00000594973 CD164Q04900 197 aa10.96□□□□□ -0.66
SHKBP1-205ENST00000594973 FAM30AQ9NZY2 134 aa10.96□□□□□ -0.66
SHKBP1-205ENST00000594973 C7orf33Q8WU49 177 aa10.95□□□□□ -0.66
SHKBP1-205ENST00000594973 TRAV22A0A0B4J277 110 aa10.95□□□□□ -0.66
SHKBP1-205ENST00000594973 STARD9Q9P2P6 4700 aa10.93□□□□□ -0.66
SHKBP1-205ENST00000594973 LRCOL1A6NCL2 159 aa10.92□□□□□ -0.66
SHKBP1-205ENST00000594973 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
SHKBP1-205ENST00000594973 NUPR2A6NF83 97 aa10.92□□□□□ -0.66
SHKBP1-205ENST00000594973 ETDCA0A1B0GVM5 59 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms