RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 HINT1P49773 126 aaPredicted RBP10.33□□□□□ -0.76
GCDH-213ENST00000590627 PKHD1L1Q86WI1 4243 aa10.33□□□□□ -0.76
GCDH-213ENST00000590627 IGLV1-50A0A075B6I6 118 aa10.32□□□□□ -0.76
GCDH-213ENST00000590627 TMEM126AQ9H061 195 aa10.32□□□□□ -0.76
GCDH-213ENST00000590627 TRBV10-3A0A0K0K1G6 114 aa10.31□□□□□ -0.76
GCDH-213ENST00000590627 GAGE10A6NGK3 116 aa10.31□□□□□ -0.76
GCDH-213ENST00000590627 S100A7L2Q5SY68 101 aa10.31□□□□□ -0.76
GCDH-213ENST00000590627 UBR4Q5T4S7 5183 aa10.31□□□□□ -0.76
GCDH-213ENST00000590627 PCP4L1A6NKN8 68 aa10.3□□□□□ -0.76
GCDH-213ENST00000590627 OR13C6PQ8NH95 151 aa10.3□□□□□ -0.76
GCDH-213ENST00000590627 KCNQ1DNQ9H478 68 aa10.3□□□□□ -0.76
GCDH-213ENST00000590627 NHP2Q9NX24 153 aaKnown RBP10.3□□□□□ -0.76
GCDH-213ENST00000590627 A6NDN8 102 aa10.29□□□□□ -0.76
GCDH-213ENST00000590627 RPL37AP8A6NKH3 93 aa10.29□□□□□ -0.76
GCDH-213ENST00000590627 RAB37Q96AX2 223 aa10.29□□□□□ -0.76
GCDH-213ENST00000590627 UBE2BP63146 152 aa10.28□□□□□ -0.76
GCDH-213ENST00000590627 KRTAP11-1Q8IUC1 163 aa10.28□□□□□ -0.76
GCDH-213ENST00000590627 PRO1854Q9UHT4 67 aa10.28□□□□□ -0.76
GCDH-213ENST00000590627 CBY1Q9Y3M2 126 aa10.28□□□□□ -0.76
GCDH-213ENST00000590627 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.77
GCDH-213ENST00000590627 PRYO14603 147 aa10.26□□□□□ -0.77
GCDH-213ENST00000590627 RPL13AP40429 203 aaKnown RBP10.26□□□□□ -0.77
GCDH-213ENST00000590627 K7ERJ3 54 aa10.25□□□□□ -0.77
GCDH-213ENST00000590627 TRAV23DV6A0A075B6W5 121 aa10.24□□□□□ -0.77
GCDH-213ENST00000590627 SPRR1AP35321 89 aa10.24□□□□□ -0.77
GCDH-213ENST00000590627 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
GCDH-213ENST00000590627 BATFQ16520 125 aa10.23□□□□□ -0.77
GCDH-213ENST00000590627 REG3GQ6UW15 175 aa10.23□□□□□ -0.77
GCDH-213ENST00000590627 SMIM11BQ8TCY0 68 aa10.22□□□□□ -0.77
GCDH-213ENST00000590627 PSORS1C2Q9UIG4 136 aa10.22□□□□□ -0.77
GCDH-213ENST00000590627 KRTAP4-16G5E9R7 235 aaPredicted RBP10.21□□□□□ -0.77
GCDH-213ENST00000590627 ZNF73O43830 326 aaPredicted RBP10.21□□□□□ -0.77
GCDH-213ENST00000590627 RPL28P46779 137 aaKnown RBP10.21□□□□□ -0.77
GCDH-213ENST00000590627 H7C2G1 150 aa10.19□□□□□ -0.78
GCDH-213ENST00000590627 BCE1O60756 84 aa10.19□□□□□ -0.78
GCDH-213ENST00000590627 DIRC1Q969H9 104 aa10.19□□□□□ -0.78
GCDH-213ENST00000590627 TRBV7-6A0A0J9YX20 115 aa10.18□□□□□ -0.78
GCDH-213ENST00000590627 C6orf99Q4VX62 202 aa10.18□□□□□ -0.78
GCDH-213ENST00000590627 TSPAN13O95857 204 aa10.17□□□□□ -0.78
GCDH-213ENST00000590627 Q1RN00 199 aa10.17□□□□□ -0.78
GCDH-213ENST00000590627 C1orf137Q5JT78 98 aa10.16□□□□□ -0.78
GCDH-213ENST00000590627 ETDCA0A1B0GVM5 59 aa10.15□□□□□ -0.78
GCDH-213ENST00000590627 B5MCH6 92 aa10.15□□□□□ -0.78
GCDH-213ENST00000590627 H0Y9J4 135 aa10.15□□□□□ -0.78
GCDH-213ENST00000590627 COL5A1-AS1Q5SY13 56 aa10.15□□□□□ -0.78
GCDH-213ENST00000590627 ELOF1P60002 83 aaKnown RBP10.14□□□□□ -0.79
GCDH-213ENST00000590627 VAMP3Q15836 100 aa10.14□□□□□ -0.79
GCDH-213ENST00000590627 FAM19A1Q7Z5A9 133 aa10.14□□□□□ -0.79
GCDH-213ENST00000590627 KRTAP13-1Q8IUC0 172 aa10.14□□□□□ -0.79
GCDH-213ENST00000590627 TAX1BP3O14907 124 aa10.13□□□□□ -0.79
GCDH-213ENST00000590627 IGLV7-43P04211 117 aa10.13□□□□□ -0.79
GCDH-213ENST00000590627 MT1HL1P0DM35 61 aa10.13□□□□□ -0.79
GCDH-213ENST00000590627 Q6ZRX8 168 aa10.13□□□□□ -0.79
GCDH-213ENST00000590627 TRIAP1O43715 76 aa10.12□□□□□ -0.79
GCDH-213ENST00000590627 COX7BP24311 80 aa10.12□□□□□ -0.79
GCDH-213ENST00000590627 C9orf118A6NHY6 69 aa10.1□□□□□ -0.79
GCDH-213ENST00000590627 H0YGX0 51 aa10.1□□□□□ -0.79
GCDH-213ENST00000590627 ZNF861PO60384 105 aa10.1□□□□□ -0.79
GCDH-213ENST00000590627 UBE2AP49459 152 aa10.1□□□□□ -0.79
GCDH-213ENST00000590627 PSMB2P49721 201 aa10.1□□□□□ -0.79
GCDH-213ENST00000590627 COX6CP09669 75 aa10.09□□□□□ -0.79
GCDH-213ENST00000590627 PRLHP81277 87 aa10.09□□□□□ -0.79
GCDH-213ENST00000590627 TNXBP22105 4242 aa10.07□□□□□ -0.8
GCDH-213ENST00000590627 LINC00575Q6W349 94 aa10.07□□□□□ -0.8
GCDH-213ENST00000590627 Q9BRP9 147 aa10.07□□□□□ -0.8
GCDH-213ENST00000590627 DHRS4-AS1Q9P1J3 65 aa10.07□□□□□ -0.8
GCDH-213ENST00000590627 H3BUT2 72 aa10.06□□□□□ -0.8
GCDH-213ENST00000590627 SMCR5Q8TEV8 140 aa10.06□□□□□ -0.8
GCDH-213ENST00000590627 NAA38Q9BRA0 125 aaKnown RBP10.06□□□□□ -0.8
GCDH-213ENST00000590627 SCGB1C2P0DMR2 95 aa10.04□□□□□ -0.8
GCDH-213ENST00000590627 A0A1B0GX51 115 aa10.03□□□□□ -0.8
GCDH-213ENST00000590627 SLC25A20O43772 301 aa10.03□□□□□ -0.8
GCDH-213ENST00000590627 LYRM7Q5U5X0 104 aa10.03□□□□□ -0.8
GCDH-213ENST00000590627 FAM218AQ96MZ4 157 aa10.03□□□□□ -0.8
GCDH-213ENST00000590627 HIGD2AQ9BW72 106 aa10.03□□□□□ -0.8
GCDH-213ENST00000590627 A0A1W2PPM0 123 aa10.02□□□□□ -0.81
GCDH-213ENST00000590627 SPINK6Q6UWN8 80 aa10.02□□□□□ -0.81
GCDH-213ENST00000590627 hADV29S1A0JD25 119 aa10.01□□□□□ -0.81
GCDH-213ENST00000590627 ERC2-IT1O76042 136 aa10.01□□□□□ -0.81
GCDH-213ENST00000590627 CLEC2BQ92478 149 aa10.01□□□□□ -0.81
GCDH-213ENST00000590627 LRP2P98164 4655 aa10.01□□□□□ -0.81
GCDH-213ENST00000590627 SNCGO76070 127 aa10□□□□□ -0.81
GCDH-213ENST00000590627 FABP2P12104 132 aa9.99□□□□□ -0.81
GCDH-213ENST00000590627 TRBV20-1A0A075B6N2 111 aa9.98□□□□□ -0.81
GCDH-213ENST00000590627 LST1O00453 97 aa9.98□□□□□ -0.81
GCDH-213ENST00000590627 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
GCDH-213ENST00000590627 TRACP01848 142 aa9.97□□□□□ -0.81
GCDH-213ENST00000590627 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.97□□□□□ -0.81
GCDH-213ENST00000590627 RNF213Q63HN8 5207 aa9.96□□□□□ -0.81
GCDH-213ENST00000590627 TCL1BO95988 128 aa9.96□□□□□ -0.82
GCDH-213ENST00000590627 ATXN8Q156A1 80 aa9.96□□□□□ -0.82
GCDH-213ENST00000590627 ZNF706Q9Y5V0 76 aaPredicted RBP9.95□□□□□ -0.82
GCDH-213ENST00000590627 Q6ZQY7 126 aa9.94□□□□□ -0.82
GCDH-213ENST00000590627 ST20-AS1Q8NBB2 130 aa9.94□□□□□ -0.82
GCDH-213ENST00000590627 SPRR4Q96PI1 79 aa9.94□□□□□ -0.82
GCDH-213ENST00000590627 IGLV5-48A0A075B6I7 105 aa9.93□□□□□ -0.82
GCDH-213ENST00000590627 SPRR1BP22528 89 aa9.92□□□□□ -0.82
GCDH-213ENST00000590627 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
GCDH-213ENST00000590627 OCIAD2Q56VL3 154 aa9.92□□□□□ -0.82
GCDH-213ENST00000590627 SPCS1Q9Y6A9 102 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 225.2 ms