RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 ETDCA0A1B0GVM5 59 aa4.4□□□□□ -1.71
NPC1-208ENST00000590301 SPRR1AP35321 89 aa4.4□□□□□ -1.71
NPC1-208ENST00000590301 NMUP48645 174 aa4.4□□□□□ -1.71
NPC1-208ENST00000590301 HERVK_113P61574 105 aa4.4□□□□□ -1.71
NPC1-208ENST00000590301 TPRXLQ17RH7 258 aa4.4□□□□□ -1.71
NPC1-208ENST00000590301 ARL17AQ8IVW1 177 aa4.4□□□□□ -1.71
NPC1-208ENST00000590301 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 LEPROTO15243 131 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST1H2BKO60814 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 DPM2O94777 84 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST1H2BJP06899 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST1H2BOP23527 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST1H2BBP33778 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST1H2BDP58876 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST1H2BCP62807 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST2H2BEQ16778 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST1H2BHQ93079 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST1H2BNQ99877 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 HIST1H2BMQ99879 126 aa4.39□□□□□ -1.71
NPC1-208ENST00000590301 IGLV7-46A0A075B6I9 117 aa4.38□□□□□ -1.71
NPC1-208ENST00000590301 KRTAP4-16G5E9R7 235 aaPredicted RBP4.38□□□□□ -1.71
NPC1-208ENST00000590301 J3QQQ9 107 aa4.38□□□□□ -1.71
NPC1-208ENST00000590301 NCR3O14931 201 aa4.38□□□□□ -1.71
NPC1-208ENST00000590301 FP248Q71RG6 208 aaPredicted RBP4.38□□□□□ -1.71
NPC1-208ENST00000590301 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
NPC1-208ENST00000590301 MIEN1Q9BRT3 115 aa4.38□□□□□ -1.71
NPC1-208ENST00000590301 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
NPC1-208ENST00000590301 SPANXB1Q9NS25 103 aaPredicted RBP4.38□□□□□ -1.71
NPC1-208ENST00000590301 TRBV10-3A0A0K0K1G6 114 aa4.37□□□□□ -1.71
NPC1-208ENST00000590301 NDUFC2O95298 119 aa4.37□□□□□ -1.71
NPC1-208ENST00000590301 TSPEAR-AS2P59090 65 aa4.37□□□□□ -1.71
NPC1-208ENST00000590301 LINC00483Q53H64 154 aa4.37□□□□□ -1.71
NPC1-208ENST00000590301 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
NPC1-208ENST00000590301 LINC00518Q8N0U6 118 aa4.37□□□□□ -1.71
NPC1-208ENST00000590301 RETNLBQ9BQ08 111 aa4.37□□□□□ -1.71
NPC1-208ENST00000590301 CBY1Q9Y3M2 126 aa4.37□□□□□ -1.71
NPC1-208ENST00000590301 SPINK1P00995 79 aa4.36□□□□□ -1.71
NPC1-208ENST00000590301 IGKCP01834 107 aa4.36□□□□□ -1.71
NPC1-208ENST00000590301 LGALS3P17931 250 aaKnown RBP4.36□□□□□ -1.71
NPC1-208ENST00000590301 DDTP30046 118 aa4.36□□□□□ -1.71
NPC1-208ENST00000590301 COA6Q5JTJ3 125 aaKnown RBP4.36□□□□□ -1.71
NPC1-208ENST00000590301 SMCR5Q8TEV8 140 aa4.36□□□□□ -1.71
NPC1-208ENST00000590301 IGLV6-57P01721 117 aa4.35□□□□□ -1.71
NPC1-208ENST00000590301 FABP4P15090 132 aa4.35□□□□□ -1.71
NPC1-208ENST00000590301 JOSD1Q15040 202 aaPredicted RBP4.35□□□□□ -1.71
NPC1-208ENST00000590301 S100A7L2Q5SY68 101 aa4.35□□□□□ -1.71
NPC1-208ENST00000590301 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
NPC1-208ENST00000590301 PMCHL2Q9BQD1 86 aa4.35□□□□□ -1.71
NPC1-208ENST00000590301 PPDPFQ9H3Y8 114 aa4.35□□□□□ -1.71
NPC1-208ENST00000590301 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.71
NPC1-208ENST00000590301 Q6ZRX8 168 aa4.34□□□□□ -1.71
NPC1-208ENST00000590301 DAND5Q8N907 189 aa4.34□□□□□ -1.71
NPC1-208ENST00000590301 Q8NBF4 154 aa4.34□□□□□ -1.71
NPC1-208ENST00000590301 TRAV23DV6A0A075B6W5 121 aa4.33□□□□□ -1.72
NPC1-208ENST00000590301 E9PLD3 99 aa4.33□□□□□ -1.72
NPC1-208ENST00000590301 A0A0J9YXY3 114 aa4.32□□□□□ -1.72
NPC1-208ENST00000590301 SYS1-DBNDD2H3BUS1 97 aa4.32□□□□□ -1.72
NPC1-208ENST00000590301 ZNF73O43830 326 aaPredicted RBP4.32□□□□□ -1.72
NPC1-208ENST00000590301 TIMM17BO60830 172 aa4.32□□□□□ -1.72
NPC1-208ENST00000590301 HINT1P49773 126 aaPredicted RBP4.32□□□□□ -1.72
NPC1-208ENST00000590301 SEC61GP60059 68 aa4.32□□□□□ -1.72
NPC1-208ENST00000590301 LINC01545Q5VT33 79 aa4.32□□□□□ -1.72
NPC1-208ENST00000590301 ERC2-IT1O76042 136 aa4.31□□□□□ -1.72
NPC1-208ENST00000590301 MOBPQ13875 183 aa4.31□□□□□ -1.72
NPC1-208ENST00000590301 Q9BRP9 147 aa4.31□□□□□ -1.72
NPC1-208ENST00000590301 SPANXCQ9NY87 97 aa4.31□□□□□ -1.72
NPC1-208ENST00000590301 IGLV9-49A0A0B4J1Y8 123 aa4.3□□□□□ -1.72
NPC1-208ENST00000590301 SLC25A20O43772 301 aa4.3□□□□□ -1.72
NPC1-208ENST00000590301 C3orf79P0CE67 100 aa4.3□□□□□ -1.72
NPC1-208ENST00000590301 KRTAP13-3Q3SY46 172 aa4.3□□□□□ -1.72
NPC1-208ENST00000590301 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
NPC1-208ENST00000590301 SOSTDC1Q6X4U4 206 aa4.3□□□□□ -1.72
NPC1-208ENST00000590301 SLC25A34Q6PIV7 304 aa4.29□□□□□ -1.72
NPC1-208ENST00000590301 LINC00308Q8TCZ7 52 aa4.29□□□□□ -1.72
NPC1-208ENST00000590301 LITAFQ99732 161 aa4.29□□□□□ -1.72
NPC1-208ENST00000590301 SPANXDQ9BXN6 97 aa4.29□□□□□ -1.72
NPC1-208ENST00000590301 DHRS4-AS1Q9P1J3 65 aa4.29□□□□□ -1.72
NPC1-208ENST00000590301 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
NPC1-208ENST00000590301 S100A1P23297 94 aa4.28□□□□□ -1.72
NPC1-208ENST00000590301 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
NPC1-208ENST00000590301 Q8N377 158 aa4.28□□□□□ -1.72
NPC1-208ENST00000590301 COPS9Q8WXC6 57 aa4.28□□□□□ -1.72
NPC1-208ENST00000590301 ZNF815PA8K554 130 aa4.27□□□□□ -1.73
NPC1-208ENST00000590301 SPRR1BP22528 89 aa4.27□□□□□ -1.73
NPC1-208ENST00000590301 AKR1D1P51857 326 aa4.27□□□□□ -1.73
NPC1-208ENST00000590301 NPC2P61916 151 aa4.27□□□□□ -1.73
NPC1-208ENST00000590301 C9orf153Q5TBE3 101 aa4.27□□□□□ -1.73
NPC1-208ENST00000590301 Q6ZVQ6 151 aa4.27□□□□□ -1.73
NPC1-208ENST00000590301 OR13C6PQ8NH95 151 aa4.27□□□□□ -1.73
NPC1-208ENST00000590301 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
NPC1-208ENST00000590301 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
NPC1-208ENST00000590301 C20orf202A1L168 122 aa4.26□□□□□ -1.73
NPC1-208ENST00000590301 TTTY13Q9BZ97 58 aa4.26□□□□□ -1.73
NPC1-208ENST00000590301 MUC17Q685J3 4493 aa4.26□□□□□ -1.73
NPC1-208ENST00000590301 TRBV7-6A0A0J9YX20 115 aa4.25□□□□□ -1.73
NPC1-208ENST00000590301 COX7BP24311 80 aa4.25□□□□□ -1.73
NPC1-208ENST00000590301 ELOF1P60002 83 aaKnown RBP4.25□□□□□ -1.73
NPC1-208ENST00000590301 Q6ZVH6 145 aa4.25□□□□□ -1.73
NPC1-208ENST00000590301 HIST3H2BBQ8N257 126 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms