RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 XGP55808 180 aa6.71□□□□□ -1.34
VPS25-203ENST00000589520 SDIM1Q6ZPB5 146 aa6.71□□□□□ -1.34
VPS25-203ENST00000589520 LINC00643Q86TS7 51 aa6.71□□□□□ -1.34
VPS25-203ENST00000589520 LINC00528Q8N1L1 170 aa6.71□□□□□ -1.34
VPS25-203ENST00000589520 DHRS4-AS1Q9P1J3 65 aa6.71□□□□□ -1.34
VPS25-203ENST00000589520 CCKP06307 115 aa6.7□□□□□ -1.34
VPS25-203ENST00000589520 RBM3P98179 157 aaKnown RBP6.7□□□□□ -1.34
VPS25-203ENST00000589520 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
VPS25-203ENST00000589520 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
VPS25-203ENST00000589520 Q6ZQY7 126 aa6.7□□□□□ -1.34
VPS25-203ENST00000589520 MRPL55Q7Z7F7 128 aaKnown RBP6.7□□□□□ -1.34
VPS25-203ENST00000589520 IMUPQ9GZP8 106 aa6.7□□□□□ -1.34
VPS25-203ENST00000589520 LINC00474Q9P2X8 69 aa6.7□□□□□ -1.34
VPS25-203ENST00000589520 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
VPS25-203ENST00000589520 SPRR1AP35321 89 aa6.69□□□□□ -1.34
VPS25-203ENST00000589520 C14orf132Q9NPU4 83 aa6.69□□□□□ -1.34
VPS25-203ENST00000589520 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
VPS25-203ENST00000589520 LAMTOR3Q9UHA4 124 aa6.68□□□□□ -1.34
VPS25-203ENST00000589520 TENM2Q9NT68 2774 aa6.68□□□□□ -1.34
VPS25-203ENST00000589520 ETDCA0A1B0GVM5 59 aa6.67□□□□□ -1.34
VPS25-203ENST00000589520 LRCOL1A6NCL2 159 aa6.67□□□□□ -1.34
VPS25-203ENST00000589520 C9orf163Q8N9P6 203 aa6.67□□□□□ -1.34
VPS25-203ENST00000589520 DSCR8Q96T75 97 aa6.67□□□□□ -1.34
VPS25-203ENST00000589520 HERC2O95714 4834 aa6.66□□□□□ -1.34
VPS25-203ENST00000589520 TRBV7-7A0A0K0K1E9 115 aa6.65□□□□□ -1.34
VPS25-203ENST00000589520 B5MCH6 92 aa6.65□□□□□ -1.34
VPS25-203ENST00000589520 KRTAP4-16G5E9R7 235 aaPredicted RBP6.65□□□□□ -1.34
VPS25-203ENST00000589520 Q6ZRN7 208 aaPredicted RBP6.65□□□□□ -1.34
VPS25-203ENST00000589520 Q6ZRX8 168 aa6.65□□□□□ -1.34
VPS25-203ENST00000589520 NDUFV3P56181 108 aaKnown RBP6.64□□□□□ -1.35
VPS25-203ENST00000589520 REG3GQ6UW15 175 aa6.64□□□□□ -1.35
VPS25-203ENST00000589520 A0A096LNI7 61 aa6.63□□□□□ -1.35
VPS25-203ENST00000589520 FAM168BA1KXE4 195 aa6.63□□□□□ -1.35
VPS25-203ENST00000589520 Q6ZQT0 140 aa6.63□□□□□ -1.35
VPS25-203ENST00000589520 FAM19A5Q7Z5A7 132 aaPredicted RBP6.63□□□□□ -1.35
VPS25-203ENST00000589520 KRTAP7-1Q8IUC3 87 aa6.63□□□□□ -1.35
VPS25-203ENST00000589520 PLECQ15149 4684 aaKnown RBP6.62□□□□□ -1.35
VPS25-203ENST00000589520 A0A1B0GW54 56 aa6.62□□□□□ -1.35
VPS25-203ENST00000589520 RPL37AP8A6NKH3 93 aa6.62□□□□□ -1.35
VPS25-203ENST00000589520 ATP5EP2Q5VTU8 51 aa6.62□□□□□ -1.35
VPS25-203ENST00000589520 Q6ZR54 194 aa6.62□□□□□ -1.35
VPS25-203ENST00000589520 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
VPS25-203ENST00000589520 Q6JHZ5 121 aa6.61□□□□□ -1.35
VPS25-203ENST00000589520 UBL5Q9BZL1 73 aa6.61□□□□□ -1.35
VPS25-203ENST00000589520 A0A087WTM6 91 aa6.6□□□□□ -1.35
VPS25-203ENST00000589520 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
VPS25-203ENST00000589520 TRBV7-4A0A0J9YYF1 115 aa6.6□□□□□ -1.35
VPS25-203ENST00000589520 A0A1W2PNN7 141 aa6.6□□□□□ -1.35
VPS25-203ENST00000589520 H0Y9J4 135 aa6.6□□□□□ -1.35
VPS25-203ENST00000589520 WWC2-AS2Q96NR7 200 aa6.6□□□□□ -1.35
VPS25-203ENST00000589520 LINC00846Q9NV44 126 aa6.6□□□□□ -1.35
VPS25-203ENST00000589520 IGLV5-48A0A075B6I7 105 aa6.59□□□□□ -1.35
VPS25-203ENST00000589520 SMCR5Q8TEV8 140 aa6.59□□□□□ -1.35
VPS25-203ENST00000589520 VPS13DQ5THJ4 4388 aa6.59□□□□□ -1.36
VPS25-203ENST00000589520 SACSQ9NZJ4 4579 aa6.59□□□□□ -1.36
VPS25-203ENST00000589520 STAB2Q8WWQ8 2551 aa6.58□□□□□ -1.36
VPS25-203ENST00000589520 A0A1B0GV72 72 aa6.58□□□□□ -1.36
VPS25-203ENST00000589520 UBE2BP63146 152 aa6.58□□□□□ -1.36
VPS25-203ENST00000589520 C1orf134Q5TEV5 83 aa6.58□□□□□ -1.36
VPS25-203ENST00000589520 EPM2AB3EWF7 344 aa6.57□□□□□ -1.36
VPS25-203ENST00000589520 M0R2N4 97 aa6.57□□□□□ -1.36
VPS25-203ENST00000589520 Q8N377 158 aa6.57□□□□□ -1.36
VPS25-203ENST00000589520 Q9BRP9 147 aa6.57□□□□□ -1.36
VPS25-203ENST00000589520 C3orf84H3BNL1 204 aa6.56□□□□□ -1.36
VPS25-203ENST00000589520 LINC01547P58512 204 aaPredicted RBP6.56□□□□□ -1.36
VPS25-203ENST00000589520 FAM19A1Q7Z5A9 133 aa6.55□□□□□ -1.36
VPS25-203ENST00000589520 DPH3Q96FX2 82 aa6.55□□□□□ -1.36
VPS25-203ENST00000589520 DEFB105AQ8NG35 78 aa6.54□□□□□ -1.36
VPS25-203ENST00000589520 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
VPS25-203ENST00000589520 SPACA4Q8TDM5 124 aa6.53□□□□□ -1.36
VPS25-203ENST00000589520 ANAPC13Q9BS18 74 aa6.53□□□□□ -1.36
VPS25-203ENST00000589520 RTL8CO15255 209 aa6.52□□□□□ -1.37
VPS25-203ENST00000589520 LY6G6CO95867 125 aa6.52□□□□□ -1.37
VPS25-203ENST00000589520 PHF5AQ7RTV0 110 aaKnown RBP6.52□□□□□ -1.37
VPS25-203ENST00000589520 LINC00476Q8WZB0 136 aa6.52□□□□□ -1.37
VPS25-203ENST00000589520 DNAH7Q8WXX0 4024 aa6.52□□□□□ -1.37
VPS25-203ENST00000589520 LYSTQ99698 3801 aa6.51□□□□□ -1.37
VPS25-203ENST00000589520 F8WEM9 126 aa6.51□□□□□ -1.37
VPS25-203ENST00000589520 CHTF8P0CG12 524 aa6.51□□□□□ -1.37
VPS25-203ENST00000589520 FUSP35637 526 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS25-203ENST00000589520 CXCL6P80162 114 aa6.51□□□□□ -1.37
VPS25-203ENST00000589520 TNP2Q05952 138 aa6.51□□□□□ -1.37
VPS25-203ENST00000589520 BCE1O60756 84 aa6.5□□□□□ -1.37
VPS25-203ENST00000589520 SPRR1BP22528 89 aa6.5□□□□□ -1.37
VPS25-203ENST00000589520 STARD9Q9P2P6 4700 aa6.5□□□□□ -1.37
VPS25-203ENST00000589520 DNAH10Q8IVF4 4471 aa6.49□□□□□ -1.37
VPS25-203ENST00000589520 IGLV8-61A0A075B6I0 122 aa6.49□□□□□ -1.37
VPS25-203ENST00000589520 IGLV5-52A0A0A0MRZ9 124 aa6.49□□□□□ -1.37
VPS25-203ENST00000589520 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
VPS25-203ENST00000589520 ERC2-IT1O76042 136 aa6.49□□□□□ -1.37
VPS25-203ENST00000589520 UBE2AP49459 152 aa6.49□□□□□ -1.37
VPS25-203ENST00000589520 Q6ZVQ6 151 aa6.49□□□□□ -1.37
VPS25-203ENST00000589520 ST20-AS1Q8NBB2 130 aa6.49□□□□□ -1.37
VPS25-203ENST00000589520 FAM236AA0A1B0GUQ0 79 aa6.48□□□□□ -1.37
VPS25-203ENST00000589520 FAM236BA0A1B0GV22 79 aa6.48□□□□□ -1.37
VPS25-203ENST00000589520 ATOX1O00244 68 aa6.48□□□□□ -1.37
VPS25-203ENST00000589520 C1orf137Q5JT78 98 aa6.48□□□□□ -1.37
VPS25-203ENST00000589520 HIGD2AQ9BW72 106 aa6.48□□□□□ -1.37
VPS25-203ENST00000589520 PLAC8Q9NZF1 115 aa6.48□□□□□ -1.37
VPS25-203ENST00000589520 HIST1H4AP62805 103 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms