RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 HERVK_113P61574 105 aa10.71□□□□□ -0.69
TRAF4-216ENST00000586813 HSPB8Q9UJY1 196 aa10.71□□□□□ -0.69
TRAF4-216ENST00000586813 LGALS3P17931 250 aaKnown RBP10.7□□□□□ -0.7
TRAF4-216ENST00000586813 LINC00310P59036 64 aa10.7□□□□□ -0.7
TRAF4-216ENST00000586813 DPM2O94777 84 aa10.69□□□□□ -0.7
TRAF4-216ENST00000586813 PMCHL2Q9BQD1 86 aa10.69□□□□□ -0.7
TRAF4-216ENST00000586813 ZNF73O43830 326 aaPredicted RBP10.68□□□□□ -0.7
TRAF4-216ENST00000586813 FABP4P15090 132 aa10.68□□□□□ -0.7
TRAF4-216ENST00000586813 LCE2DQ5TA82 110 aaPredicted RBP10.68□□□□□ -0.7
TRAF4-216ENST00000586813 SOSTDC1Q6X4U4 206 aa10.68□□□□□ -0.7
TRAF4-216ENST00000586813 ST20-AS1Q8NBB2 130 aa10.68□□□□□ -0.7
TRAF4-216ENST00000586813 EIF4EBP3O60516 100 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-216ENST00000586813 IGKCP01834 107 aa10.66□□□□□ -0.7
TRAF4-216ENST00000586813 NPC2P61916 151 aa10.66□□□□□ -0.7
TRAF4-216ENST00000586813 C5orf52A6NGY3 159 aa10.64□□□□□ -0.71
TRAF4-216ENST00000586813 ADAMTSL4-AS1Q5T5F5 129 aa10.64□□□□□ -0.71
TRAF4-216ENST00000586813 FSIP2Q5CZC0 6907 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 A0A0J9YXY3 114 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST1H2BKO60814 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST1H2BJP06899 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST1H2BOP23527 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST1H2BBP33778 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST1H2BDP58876 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST1H2BCP62807 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST2H2BEQ16778 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST1H2BHQ93079 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST1H2BNQ99877 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 HIST1H2BMQ99879 126 aa10.63□□□□□ -0.71
TRAF4-216ENST00000586813 S100A1P23297 94 aa10.62□□□□□ -0.71
TRAF4-216ENST00000586813 HINT1P49773 126 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-216ENST00000586813 LCE2CQ5TA81 110 aa10.61□□□□□ -0.71
TRAF4-216ENST00000586813 CBY1Q9Y3M2 126 aa10.61□□□□□ -0.71
TRAF4-216ENST00000586813 E9PLD3 99 aa10.59□□□□□ -0.71
TRAF4-216ENST00000586813 SPRR1BP22528 89 aa10.59□□□□□ -0.71
TRAF4-216ENST00000586813 LIMD2Q9BT23 127 aa10.59□□□□□ -0.71
TRAF4-216ENST00000586813 KRTAP19-2Q3LHN2 52 aa10.57□□□□□ -0.72
TRAF4-216ENST00000586813 SLC25A34Q6PIV7 304 aa10.57□□□□□ -0.72
TRAF4-216ENST00000586813 HRCT1Q6UXD1 115 aa10.57□□□□□ -0.72
TRAF4-216ENST00000586813 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
TRAF4-216ENST00000586813 OR13C6PQ8NH95 151 aa10.55□□□□□ -0.72
TRAF4-216ENST00000586813 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
TRAF4-216ENST00000586813 LITAFQ99732 161 aa10.55□□□□□ -0.72
TRAF4-216ENST00000586813 DHRS4-AS1Q9P1J3 65 aa10.55□□□□□ -0.72
TRAF4-216ENST00000586813 PCOTHQ58A44 107 aa10.54□□□□□ -0.72
TRAF4-216ENST00000586813 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
TRAF4-216ENST00000586813 CRCT1Q9UGL9 99 aa10.53□□□□□ -0.72
TRAF4-216ENST00000586813 LAMTOR3Q9UHA4 124 aa10.53□□□□□ -0.72
TRAF4-216ENST00000586813 IGLV8-61A0A075B6I0 122 aa10.52□□□□□ -0.73
TRAF4-216ENST00000586813 SYS1-DBNDD2H3BUS1 97 aa10.52□□□□□ -0.73
TRAF4-216ENST00000586813 TIMM17BO60830 172 aa10.51□□□□□ -0.73
TRAF4-216ENST00000586813 MT1HP80294 61 aa10.51□□□□□ -0.73
TRAF4-216ENST00000586813 SPANXDQ9BXN6 97 aa10.51□□□□□ -0.73
TRAF4-216ENST00000586813 ELOF1P60002 83 aaKnown RBP10.5□□□□□ -0.73
TRAF4-216ENST00000586813 COA6Q5JTJ3 125 aaKnown RBP10.49□□□□□ -0.73
TRAF4-216ENST00000586813 COX7BP24311 80 aa10.48□□□□□ -0.73
TRAF4-216ENST00000586813 KRTDAPP60985 99 aa10.48□□□□□ -0.73
TRAF4-216ENST00000586813 PET117Q6UWS5 81 aa10.48□□□□□ -0.73
TRAF4-216ENST00000586813 CD164Q04900 197 aa10.47□□□□□ -0.73
TRAF4-216ENST00000586813 Q1RN00 199 aa10.47□□□□□ -0.73
TRAF4-216ENST00000586813 C6orf99Q4VX62 202 aa10.47□□□□□ -0.73
TRAF4-216ENST00000586813 C20orf202A1L168 122 aa10.46□□□□□ -0.73
TRAF4-216ENST00000586813 ZNF815PA8K554 130 aa10.45□□□□□ -0.74
TRAF4-216ENST00000586813 C3orf79P0CE67 100 aa10.45□□□□□ -0.74
TRAF4-216ENST00000586813 CFC1BP0CG36 223 aa10.45□□□□□ -0.74
TRAF4-216ENST00000586813 TAL2Q16559 108 aa10.45□□□□□ -0.74
TRAF4-216ENST00000586813 DEFB105AQ8NG35 78 aa10.45□□□□□ -0.74
TRAF4-216ENST00000586813 LINC01545Q5VT33 79 aa10.44□□□□□ -0.74
TRAF4-216ENST00000586813 PRO1933Q9H354 126 aa10.44□□□□□ -0.74
TRAF4-216ENST00000586813 TEX49A0A1B0GTD5 131 aa10.43□□□□□ -0.74
TRAF4-216ENST00000586813 LINC00518Q8N0U6 118 aa10.43□□□□□ -0.74
TRAF4-216ENST00000586813 H7C2G1 150 aa10.42□□□□□ -0.74
TRAF4-216ENST00000586813 S100A6P06703 90 aa10.42□□□□□ -0.74
TRAF4-216ENST00000586813 S100A2P29034 98 aa10.42□□□□□ -0.74
TRAF4-216ENST00000586813 TTTY13Q9BZ97 58 aa10.42□□□□□ -0.74
TRAF4-216ENST00000586813 Q5XG85 94 aa10.41□□□□□ -0.74
TRAF4-216ENST00000586813 SMIM29Q86T20 159 aa10.4□□□□□ -0.74
TRAF4-216ENST00000586813 TRBV7-6A0A0J9YX20 115 aa10.39□□□□□ -0.75
TRAF4-216ENST00000586813 AKR1D1P51857 326 aa10.39□□□□□ -0.75
TRAF4-216ENST00000586813 C1orf195Q5TG92 126 aa10.38□□□□□ -0.75
TRAF4-216ENST00000586813 LORP23490 312 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-216ENST00000586813 IGLV5-48A0A075B6I7 105 aa10.36□□□□□ -0.75
TRAF4-216ENST00000586813 A0A1B0GWB2 263 aa10.36□□□□□ -0.75
TRAF4-216ENST00000586813 A0A0G2JQZ4 141 aa10.35□□□□□ -0.75
TRAF4-216ENST00000586813 KRTAP10-6P60371 365 aaPredicted RBP10.35□□□□□ -0.75
TRAF4-216ENST00000586813 RPL37P61927 97 aaKnown RBP10.35□□□□□ -0.75
TRAF4-216ENST00000586813 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
TRAF4-216ENST00000586813 HIST3H2BBQ8N257 126 aa10.33□□□□□ -0.76
TRAF4-216ENST00000586813 ATOH7Q8N100 152 aa10.32□□□□□ -0.76
TRAF4-216ENST00000586813 COPS9Q8WXC6 57 aa10.32□□□□□ -0.76
TRAF4-216ENST00000586813 A6NDN8 102 aa10.31□□□□□ -0.76
TRAF4-216ENST00000586813 HIST1H2BLQ99880 126 aa10.31□□□□□ -0.76
TRAF4-216ENST00000586813 FLGP20930 4061 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-216ENST00000586813 IFITM1P13164 125 aa10.29□□□□□ -0.76
TRAF4-216ENST00000586813 A4D1N5 150 aa10.28□□□□□ -0.76
TRAF4-216ENST00000586813 M0R2T5 61 aa10.28□□□□□ -0.76
TRAF4-216ENST00000586813 HSBP1L1C9JCN9 74 aa10.27□□□□□ -0.77
TRAF4-216ENST00000586813 SNRPEP62304 92 aaKnown RBP10.27□□□□□ -0.77
TRAF4-216ENST00000586813 ANKRD39Q53RE8 183 aa10.26□□□□□ -0.77
TRAF4-216ENST00000586813 COX6B2Q6YFQ2 88 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms