RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 ZNF706Q9Y5V0 76 aaPredicted RBP11.03□□□□□ -0.64
TPM4-204ENST00000586499 Q9BRP9 147 aa11.02□□□□□ -0.65
TPM4-204ENST00000586499 TIMM17BO60830 172 aa11.01□□□□□ -0.65
TPM4-204ENST00000586499 ATOH7Q8N100 152 aa11.01□□□□□ -0.65
TPM4-204ENST00000586499 TRAV23DV6A0A075B6W5 121 aa11□□□□□ -0.65
TPM4-204ENST00000586499 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
TPM4-204ENST00000586499 Q6ZRX8 168 aa11□□□□□ -0.65
TPM4-204ENST00000586499 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
TPM4-204ENST00000586499 C20orf202A1L168 122 aa10.98□□□□□ -0.65
TPM4-204ENST00000586499 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
TPM4-204ENST00000586499 ZNF73O43830 326 aaPredicted RBP10.96□□□□□ -0.65
TPM4-204ENST00000586499 LINC00483Q53H64 154 aa10.96□□□□□ -0.65
TPM4-204ENST00000586499 OR13C6PQ8NH95 151 aa10.96□□□□□ -0.65
TPM4-204ENST00000586499 SCGB1D4Q6XE38 83 aa10.94□□□□□ -0.66
TPM4-204ENST00000586499 Q8NBF4 154 aa10.94□□□□□ -0.66
TPM4-204ENST00000586499 PCP2Q8IVA1 136 aa10.93□□□□□ -0.66
TPM4-204ENST00000586499 TMA7Q9Y2S6 64 aaKnown RBP10.93□□□□□ -0.66
TPM4-204ENST00000586499 SPAG11AQ6PDA7 123 aa10.92□□□□□ -0.66
TPM4-204ENST00000586499 HIST3H2BBQ8N257 126 aa10.92□□□□□ -0.66
TPM4-204ENST00000586499 IGLV9-49A0A0B4J1Y8 123 aa10.91□□□□□ -0.66
TPM4-204ENST00000586499 JOSD1Q15040 202 aaPredicted RBP10.91□□□□□ -0.66
TPM4-204ENST00000586499 S100A6P06703 90 aa10.9□□□□□ -0.66
TPM4-204ENST00000586499 CTAG1AP78358 180 aa10.9□□□□□ -0.66
TPM4-204ENST00000586499 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
TPM4-204ENST00000586499 ST20-AS1Q8NBB2 130 aa10.9□□□□□ -0.66
TPM4-204ENST00000586499 HIST1H2BLQ99880 126 aa10.9□□□□□ -0.66
TPM4-204ENST00000586499 SPANXDQ9BXN6 97 aa10.9□□□□□ -0.66
TPM4-204ENST00000586499 MOBPQ13875 183 aa10.89□□□□□ -0.67
TPM4-204ENST00000586499 HINT1P49773 126 aaPredicted RBP10.88□□□□□ -0.67
TPM4-204ENST00000586499 CBY1Q9Y3M2 126 aa10.88□□□□□ -0.67
TPM4-204ENST00000586499 S100A2P29034 98 aa10.87□□□□□ -0.67
TPM4-204ENST00000586499 LINC00518Q8N0U6 118 aa10.87□□□□□ -0.67
TPM4-204ENST00000586499 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
TPM4-204ENST00000586499 AKR1D1P51857 326 aa10.85□□□□□ -0.67
TPM4-204ENST00000586499 MUSTN1Q8IVN3 82 aa10.85□□□□□ -0.67
TPM4-204ENST00000586499 C6orf99Q4VX62 202 aa10.84□□□□□ -0.67
TPM4-204ENST00000586499 C5orf52A6NGY3 159 aa10.83□□□□□ -0.68
TPM4-204ENST00000586499 IFITM1P13164 125 aa10.83□□□□□ -0.68
TPM4-204ENST00000586499 SSBP3-AS1Q7Z2R9 100 aa10.83□□□□□ -0.68
TPM4-204ENST00000586499 SPINK1P00995 79 aa10.82□□□□□ -0.68
TPM4-204ENST00000586499 SNRPEP62304 92 aaKnown RBP10.82□□□□□ -0.68
TPM4-204ENST00000586499 COX7BP24311 80 aa10.81□□□□□ -0.68
TPM4-204ENST00000586499 Q6ZVH6 145 aa10.81□□□□□ -0.68
TPM4-204ENST00000586499 A6NDN8 102 aa10.8□□□□□ -0.68
TPM4-204ENST00000586499 ELOF1P60002 83 aaKnown RBP10.8□□□□□ -0.68
TPM4-204ENST00000586499 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
TPM4-204ENST00000586499 C9orf153Q5TBE3 101 aa10.8□□□□□ -0.68
TPM4-204ENST00000586499 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
TPM4-204ENST00000586499 MUC2Q02817 5179 aa10.8□□□□□ -0.68
TPM4-204ENST00000586499 COPS9Q8WXC6 57 aa10.79□□□□□ -0.68
TPM4-204ENST00000586499 CDIP1Q9H305 208 aa10.79□□□□□ -0.68
TPM4-204ENST00000586499 HSBP1L1C9JCN9 74 aa10.76□□□□□ -0.69
TPM4-204ENST00000586499 SPRR1BP22528 89 aa10.76□□□□□ -0.69
TPM4-204ENST00000586499 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
TPM4-204ENST00000586499 Q8N377 158 aa10.74□□□□□ -0.69
TPM4-204ENST00000586499 DEFB105AQ8NG35 78 aa10.74□□□□□ -0.69
TPM4-204ENST00000586499 TRBV7-6A0A0J9YX20 115 aa10.73□□□□□ -0.69
TPM4-204ENST00000586499 SCGB1D1O95968 90 aa10.73□□□□□ -0.69
TPM4-204ENST00000586499 MUC17Q685J3 4493 aa10.72□□□□□ -0.69
TPM4-204ENST00000586499 LOC105371267A0A1B0GV96 52 aa10.71□□□□□ -0.69
TPM4-204ENST00000586499 A0A1B0GWB2 263 aa10.71□□□□□ -0.69
TPM4-204ENST00000586499 RPS29P62273 56 aaKnown RBP10.71□□□□□ -0.69
TPM4-204ENST00000586499 TAL2Q16559 108 aa10.71□□□□□ -0.69
TPM4-204ENST00000586499 SMIM11BQ8TCY0 68 aa10.71□□□□□ -0.69
TPM4-204ENST00000586499 TRAV13-2A0A0B4J235 113 aa10.7□□□□□ -0.7
TPM4-204ENST00000586499 LAMTOR3Q9UHA4 124 aa10.7□□□□□ -0.7
TPM4-204ENST00000586499 Q1RN00 199 aa10.69□□□□□ -0.7
TPM4-204ENST00000586499 KRTAP13-3Q3SY46 172 aa10.69□□□□□ -0.7
TPM4-204ENST00000586499 SLC25A34Q6PIV7 304 aa10.69□□□□□ -0.7
TPM4-204ENST00000586499 A4D1N5 150 aa10.68□□□□□ -0.7
TPM4-204ENST00000586499 HRCT1Q6UXD1 115 aa10.68□□□□□ -0.7
TPM4-204ENST00000586499 SLC25A20O43772 301 aa10.67□□□□□ -0.7
TPM4-204ENST00000586499 TEX49A0A1B0GTD5 131 aa10.66□□□□□ -0.7
TPM4-204ENST00000586499 LINC01547P58512 204 aaPredicted RBP10.66□□□□□ -0.7
TPM4-204ENST00000586499 SMIM29Q86T20 159 aa10.64□□□□□ -0.71
TPM4-204ENST00000586499 IGLV5-48A0A075B6I7 105 aa10.62□□□□□ -0.71
TPM4-204ENST00000586499 COX8AP10176 69 aa10.62□□□□□ -0.71
TPM4-204ENST00000586499 C12orf57Q99622 126 aa10.62□□□□□ -0.71
TPM4-204ENST00000586499 HIST1H4GQ99525 98 aa10.61□□□□□ -0.71
TPM4-204ENST00000586499 A0A0G2JQZ4 141 aa10.6□□□□□ -0.71
TPM4-204ENST00000586499 C14orf144Q96I85 54 aa10.6□□□□□ -0.71
TPM4-204ENST00000586499 PRO1933Q9H354 126 aa10.59□□□□□ -0.71
TPM4-204ENST00000586499 VAMP3Q15836 100 aa10.58□□□□□ -0.72
TPM4-204ENST00000586499 NHP2Q9NX24 153 aaKnown RBP10.58□□□□□ -0.72
TPM4-204ENST00000586499 DLEU1O43261 78 aa10.57□□□□□ -0.72
TPM4-204ENST00000586499 LINC00575Q6W349 94 aa10.57□□□□□ -0.72
TPM4-204ENST00000586499 PAM16Q9Y3D7 125 aa10.57□□□□□ -0.72
TPM4-204ENST00000586499 H7C2G1 150 aa10.56□□□□□ -0.72
TPM4-204ENST00000586499 LIMD2Q9BT23 127 aa10.56□□□□□ -0.72
TPM4-204ENST00000586499 SPATA45Q537H7 98 aa10.55□□□□□ -0.72
TPM4-204ENST00000586499 A0A0U1RQV1 116 aa10.54□□□□□ -0.72
TPM4-204ENST00000586499 SMIM6P0DI80 62 aa10.54□□□□□ -0.72
TPM4-204ENST00000586499 CD164Q04900 197 aa10.54□□□□□ -0.72
TPM4-204ENST00000586499 hADV29S1A0JD25 119 aa10.52□□□□□ -0.73
TPM4-204ENST00000586499 ASB16-AS1Q495Z4 193 aa10.52□□□□□ -0.73
TPM4-204ENST00000586499 PYY3Q5JQD4 70 aa10.51□□□□□ -0.73
TPM4-204ENST00000586499 Q6ZQY7 126 aa10.51□□□□□ -0.73
TPM4-204ENST00000586499 VAMP8Q9BV40 100 aa10.51□□□□□ -0.73
TPM4-204ENST00000586499 C2orf91Q6ZV80 131 aa10.5□□□□□ -0.73
TPM4-204ENST00000586499 CFC1BP0CG36 223 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms