RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	C20orf202	A1L168	122 aa		7.72	□□□□□ -1.17
SREBF1-223	ENST00000584760	S100A7L2	Q5SY68	101 aa		7.72	□□□□□ -1.17
SREBF1-223	ENST00000584760		Q6ZRX8	168 aa		7.72	□□□□□ -1.17
SREBF1-223	ENST00000584760	LINC00308	Q8TCZ7	52 aa		7.72	□□□□□ -1.17
SREBF1-223	ENST00000584760	TRAV23DV6	A0A075B6W5	121 aa		7.71	□□□□□ -1.18
SREBF1-223	ENST00000584760	ANKRD39	Q53RE8	183 aa		7.71	□□□□□ -1.18
SREBF1-223	ENST00000584760		Q9BRP9	147 aa		7.71	□□□□□ -1.18
SREBF1-223	ENST00000584760	SPANXC	Q9NY87	97 aa		7.71	□□□□□ -1.18
SREBF1-223	ENST00000584760	ERC2-IT1	O76042	136 aa		7.7	□□□□□ -1.18
SREBF1-223	ENST00000584760	S100A1	P23297	94 aa		7.7	□□□□□ -1.18
SREBF1-223	ENST00000584760	LINC00483	Q53H64	154 aa		7.7	□□□□□ -1.18
SREBF1-223	ENST00000584760	LCE2A	Q5TA79	106 aa	Predicted RBP	7.69	□□□□□ -1.18
SREBF1-223	ENST00000584760	ATOH7	Q8N100	152 aa		7.69	□□□□□ -1.18
SREBF1-223	ENST00000584760	ZNF73	O43830	326 aa	Predicted RBP	7.68	□□□□□ -1.18
SREBF1-223	ENST00000584760	HIST3H2BB	Q8N257	126 aa		7.68	□□□□□ -1.18
SREBF1-223	ENST00000584760	PPDPF	Q9H3Y8	114 aa		7.68	□□□□□ -1.18
SREBF1-223	ENST00000584760	AKR1D1	P51857	326 aa		7.67	□□□□□ -1.18
SREBF1-223	ENST00000584760	CTAG1A	P78358	180 aa		7.67	□□□□□ -1.18
SREBF1-223	ENST00000584760	HIST1H2BL	Q99880	126 aa		7.67	□□□□□ -1.18
SREBF1-223	ENST00000584760	SPANXD	Q9BXN6	97 aa		7.67	□□□□□ -1.18
SREBF1-223	ENST00000584760	RETNLB	Q9BQ08	111 aa		7.66	□□□□□ -1.18
SREBF1-223	ENST00000584760	GAGE2A	Q6NT46	116 aa		7.65	□□□□□ -1.18
SREBF1-223	ENST00000584760	SCGB1D4	Q6XE38	83 aa		7.65	□□□□□ -1.18
SREBF1-223	ENST00000584760	PCP2	Q8IVA1	136 aa		7.65	□□□□□ -1.18
SREBF1-223	ENST00000584760	CBY1	Q9Y3M2	126 aa		7.65	□□□□□ -1.18
SREBF1-223	ENST00000584760	JOSD1	Q15040	202 aa	Predicted RBP	7.64	□□□□□ -1.19
SREBF1-223	ENST00000584760	SPAG11A	Q6PDA7	123 aa		7.64	□□□□□ -1.19
SREBF1-223	ENST00000584760		Q8NBF4	154 aa		7.64	□□□□□ -1.19
SREBF1-223	ENST00000584760	FAT4	Q6V0I7	4981 aa		7.63	□□□□□ -1.19
SREBF1-223	ENST00000584760	S100A2	P29034	98 aa		7.63	□□□□□ -1.19
SREBF1-223	ENST00000584760	OR13C6P	Q8NH95	151 aa		7.63	□□□□□ -1.19
SREBF1-223	ENST00000584760	SNRPE	P62304	92 aa	Known RBP	7.62	□□□□□ -1.19
SREBF1-223	ENST00000584760	LINC00518	Q8N0U6	118 aa		7.62	□□□□□ -1.19
SREBF1-223	ENST00000584760	IFITM1	P13164	125 aa		7.61	□□□□□ -1.19
SREBF1-223	ENST00000584760	MOBP	Q13875	183 aa		7.61	□□□□□ -1.19
SREBF1-223	ENST00000584760	IGLV9-49	A0A0B4J1Y8	123 aa		7.6	□□□□□ -1.19
SREBF1-223	ENST00000584760	HINT1	P49773	126 aa	Predicted RBP	7.6	□□□□□ -1.19
SREBF1-223	ENST00000584760		Q6ZVH6	145 aa		7.6	□□□□□ -1.19
SREBF1-223	ENST00000584760	ST20-AS1	Q8NBB2	130 aa		7.6	□□□□□ -1.19
SREBF1-223	ENST00000584760	COPS9	Q8WXC6	57 aa		7.6	□□□□□ -1.19
SREBF1-223	ENST00000584760	C5orf52	A6NGY3	159 aa		7.59	□□□□□ -1.19
SREBF1-223	ENST00000584760	S100A6	P06703	90 aa		7.59	□□□□□ -1.19
SREBF1-223	ENST00000584760	C6orf99	Q4VX62	202 aa		7.59	□□□□□ -1.19
SREBF1-223	ENST00000584760	ELOF1	P60002	83 aa	Known RBP	7.58	□□□□□ -1.2
SREBF1-223	ENST00000584760	C4orf48	Q5BLP8	95 aa		7.58	□□□□□ -1.2
SREBF1-223	ENST00000584760	IGLV7-46	A0A075B6I9	117 aa		7.57	□□□□□ -1.2
SREBF1-223	ENST00000584760	SPINK1	P00995	79 aa		7.57	□□□□□ -1.2
SREBF1-223	ENST00000584760	TPRXL	Q17RH7	258 aa		7.57	□□□□□ -1.2
SREBF1-223	ENST00000584760	SSBP3-AS1	Q7Z2R9	100 aa		7.57	□□□□□ -1.2
SREBF1-223	ENST00000584760	MUSTN1	Q8IVN3	82 aa		7.57	□□□□□ -1.2
SREBF1-223	ENST00000584760	DHRS4-AS1	Q9P1J3	65 aa		7.57	□□□□□ -1.2
SREBF1-223	ENST00000584760	SPRR1B	P22528	89 aa		7.56	□□□□□ -1.2
SREBF1-223	ENST00000584760	COX7B	P24311	80 aa		7.56	□□□□□ -1.2
SREBF1-223	ENST00000584760	HSBP1L1	C9JCN9	74 aa		7.55	□□□□□ -1.2
SREBF1-223	ENST00000584760	RPS29	P62273	56 aa	Known RBP	7.55	□□□□□ -1.2
SREBF1-223	ENST00000584760	TRBV7-6	A0A0J9YX20	115 aa		7.54	□□□□□ -1.2
SREBF1-223	ENST00000584760	C9orf153	Q5TBE3	101 aa		7.54	□□□□□ -1.2
SREBF1-223	ENST00000584760	FP248	Q71RG6	208 aa	Predicted RBP	7.54	□□□□□ -1.2
SREBF1-223	ENST00000584760		A6NDN8	102 aa		7.53	□□□□□ -1.2
SREBF1-223	ENST00000584760		A0A1B0GWB2	263 aa		7.52	□□□□□ -1.21
SREBF1-223	ENST00000584760		Q8N377	158 aa		7.52	□□□□□ -1.21
SREBF1-223	ENST00000584760	TRAV13-2	A0A0B4J235	113 aa		7.51	□□□□□ -1.21
SREBF1-223	ENST00000584760	CDIP1	Q9H305	208 aa		7.51	□□□□□ -1.21
SREBF1-223	ENST00000584760	SCGB1D1	O95968	90 aa		7.5	□□□□□ -1.21
SREBF1-223	ENST00000584760	SLC25A34	Q6PIV7	304 aa		7.5	□□□□□ -1.21
SREBF1-223	ENST00000584760	SMIM11B	Q8TCY0	68 aa		7.5	□□□□□ -1.21
SREBF1-223	ENST00000584760	MUC17	Q685J3	4493 aa		7.5	□□□□□ -1.21
SREBF1-223	ENST00000584760		A4D1N5	150 aa		7.48	□□□□□ -1.21
SREBF1-223	ENST00000584760	KRTAP13-3	Q3SY46	172 aa		7.48	□□□□□ -1.21
SREBF1-223	ENST00000584760	IGLV5-48	A0A075B6I7	105 aa		7.47	□□□□□ -1.21
SREBF1-223	ENST00000584760	SLC25A20	O43772	301 aa		7.47	□□□□□ -1.21
SREBF1-223	ENST00000584760	COX8A	P10176	69 aa		7.47	□□□□□ -1.21
SREBF1-223	ENST00000584760	LINC01547	P58512	204 aa	Predicted RBP	7.47	□□□□□ -1.21
SREBF1-223	ENST00000584760	LAMTOR3	Q9UHA4	124 aa		7.47	□□□□□ -1.21
SREBF1-223	ENST00000584760	TEX49	A0A1B0GTD5	131 aa		7.46	□□□□□ -1.22
SREBF1-223	ENST00000584760	TAL2	Q16559	108 aa		7.46	□□□□□ -1.22
SREBF1-223	ENST00000584760		Q1RN00	199 aa		7.46	□□□□□ -1.22
SREBF1-223	ENST00000584760	DEFB105A	Q8NG35	78 aa		7.46	□□□□□ -1.22
SREBF1-223	ENST00000584760	SMIM29	Q86T20	159 aa		7.45	□□□□□ -1.22
SREBF1-223	ENST00000584760	DLEU1	O43261	78 aa		7.44	□□□□□ -1.22
SREBF1-223	ENST00000584760	NHP2	Q9NX24	153 aa	Known RBP	7.43	□□□□□ -1.22
SREBF1-223	ENST00000584760	HIST1H4G	Q99525	98 aa		7.42	□□□□□ -1.22
SREBF1-223	ENST00000584760	C12orf57	Q99622	126 aa		7.42	□□□□□ -1.22
SREBF1-223	ENST00000584760	PAM16	Q9Y3D7	125 aa		7.42	□□□□□ -1.22
SREBF1-223	ENST00000584760	HRCT1	Q6UXD1	115 aa		7.41	□□□□□ -1.22
SREBF1-223	ENST00000584760	LIMD2	Q9BT23	127 aa		7.41	□□□□□ -1.22
SREBF1-223	ENST00000584760	CD164	Q04900	197 aa		7.4	□□□□□ -1.22
SREBF1-223	ENST00000584760	SPATA45	Q537H7	98 aa		7.4	□□□□□ -1.22
SREBF1-223	ENST00000584760	LINC00575	Q6W349	94 aa		7.4	□□□□□ -1.22
SREBF1-223	ENST00000584760	C14orf144	Q96I85	54 aa		7.4	□□□□□ -1.22
SREBF1-223	ENST00000584760	PRO1933	Q9H354	126 aa		7.4	□□□□□ -1.22
SREBF1-223	ENST00000584760	VAMP3	Q15836	100 aa		7.39	□□□□□ -1.23
SREBF1-223	ENST00000584760	LCE2D	Q5TA82	110 aa	Predicted RBP	7.39	□□□□□ -1.23
SREBF1-223	ENST00000584760	VAMP8	Q9BV40	100 aa		7.39	□□□□□ -1.23
SREBF1-223	ENST00000584760	HIGD1B	Q9P298	99 aa		7.39	□□□□□ -1.23
SREBF1-223	ENST00000584760	CRCT1	Q9UGL9	99 aa		7.39	□□□□□ -1.23
SREBF1-223	ENST00000584760	C2orf91	Q6ZV80	131 aa		7.38	□□□□□ -1.23
SREBF1-223	ENST00000584760		A0A0G2JQZ4	141 aa		7.36	□□□□□ -1.23
SREBF1-223	ENST00000584760	hADV29S1	A0JD25	119 aa		7.36	□□□□□ -1.23
SREBF1-223	ENST00000584760		H7C2G1	150 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms