RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 LINC00612Q8N6U2 182 aa8.56□□□□□ -1.04
RNF43-208ENST00000584437 CDC42SE1Q9NRR8 79 aa8.56□□□□□ -1.04
RNF43-208ENST00000584437 MTORP42345 2549 aa8.55□□□□□ -1.04
RNF43-208ENST00000584437 DSCR10P59022 87 aa8.55□□□□□ -1.04
RNF43-208ENST00000584437 F8P00451 2351 aa8.53□□□□□ -1.04
RNF43-208ENST00000584437 A0A1W2PNM2 257 aa8.53□□□□□ -1.04
RNF43-208ENST00000584437 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
RNF43-208ENST00000584437 Q1T7F1 81 aa8.52□□□□□ -1.05
RNF43-208ENST00000584437 ZNF861PO60384 105 aa8.51□□□□□ -1.05
RNF43-208ENST00000584437 PCSK5Q92824 1860 aa8.51□□□□□ -1.05
RNF43-208ENST00000584437 GIG44P09565 113 aaPredicted RBP8.51□□□□□ -1.05
RNF43-208ENST00000584437 KRTAP24-1Q3LI83 254 aa8.5□□□□□ -1.05
RNF43-208ENST00000584437 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
RNF43-208ENST00000584437 OCR1Q9BZK8 76 aa8.49□□□□□ -1.05
RNF43-208ENST00000584437 APLNQ9ULZ1 77 aa8.48□□□□□ -1.05
RNF43-208ENST00000584437 C19orf73Q9NVV2 129 aa8.48□□□□□ -1.05
RNF43-208ENST00000584437 A0A0G2JQZ4 141 aa8.46□□□□□ -1.05
RNF43-208ENST00000584437 A0A1W2PNN7 141 aa8.46□□□□□ -1.05
RNF43-208ENST00000584437 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
RNF43-208ENST00000584437 C9orf163Q8N9P6 203 aa8.46□□□□□ -1.06
RNF43-208ENST00000584437 ANKRD17O75179 2603 aaKnown RBP8.45□□□□□ -1.06
RNF43-208ENST00000584437 IGLV5-37A0A075B6J1 123 aa8.43□□□□□ -1.06
RNF43-208ENST00000584437 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
RNF43-208ENST00000584437 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
RNF43-208ENST00000584437 SPTBN4Q9H254 2564 aa8.41□□□□□ -1.06
RNF43-208ENST00000584437 SRCAPQ6ZRS2 3230 aa8.4□□□□□ -1.06
RNF43-208ENST00000584437 CHD8Q9HCK8 2581 aa8.39□□□□□ -1.07
RNF43-208ENST00000584437 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
RNF43-208ENST00000584437 POLQO75417 2590 aa8.39□□□□□ -1.07
RNF43-208ENST00000584437 IGLV7-46A0A075B6I9 117 aa8.37□□□□□ -1.07
RNF43-208ENST00000584437 Q75L30 129 aa8.37□□□□□ -1.07
RNF43-208ENST00000584437 A0A087WTM6 91 aa8.36□□□□□ -1.07
RNF43-208ENST00000584437 A0A096LNT2 108 aa8.36□□□□□ -1.07
RNF43-208ENST00000584437 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
RNF43-208ENST00000584437 ZNF575Q86XF7 245 aa8.36□□□□□ -1.07
RNF43-208ENST00000584437 ACANP16112 2415 aa8.35□□□□□ -1.07
RNF43-208ENST00000584437 WWC2-AS2Q96NR7 200 aa8.35□□□□□ -1.07
RNF43-208ENST00000584437 KRTAP10-11P60412 298 aa8.35□□□□□ -1.07
RNF43-208ENST00000584437 PRR26Q8N8Z3 221 aa8.34□□□□□ -1.07
RNF43-208ENST00000584437 PSORS1C2Q9UIG4 136 aa8.34□□□□□ -1.07
RNF43-208ENST00000584437 Q5XG85 94 aa8.33□□□□□ -1.08
RNF43-208ENST00000584437 K7EIL1 84 aa8.32□□□□□ -1.08
RNF43-208ENST00000584437 ANAPC11Q9NYG5 84 aa8.32□□□□□ -1.08
RNF43-208ENST00000584437 C9orf92A6NGG3 77 aa8.32□□□□□ -1.08
RNF43-208ENST00000584437 RBM12B-AS1Q9P1G2 102 aa8.31□□□□□ -1.08
RNF43-208ENST00000584437 CENPFP49454 3210 aa8.31□□□□□ -1.08
RNF43-208ENST00000584437 Q8N1X5 172 aa8.29□□□□□ -1.08
RNF43-208ENST00000584437 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
RNF43-208ENST00000584437 CASC10Q5T4H9 136 aa8.29□□□□□ -1.08
RNF43-208ENST00000584437 Q8N9P0 234 aaPredicted RBP8.27□□□□□ -1.09
RNF43-208ENST00000584437 KRTAP10-3P60369 221 aa8.27□□□□□ -1.09
RNF43-208ENST00000584437 A0A0D9SG42 100 aa8.26□□□□□ -1.09
RNF43-208ENST00000584437 FP248Q71RG6 208 aaPredicted RBP8.26□□□□□ -1.09
RNF43-208ENST00000584437 LUZP6Q538Z0 58 aa8.25□□□□□ -1.09
RNF43-208ENST00000584437 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
RNF43-208ENST00000584437 LINC01554Q52M75 96 aa8.24□□□□□ -1.09
RNF43-208ENST00000584437 FAM229BQ4G0N7 80 aa8.23□□□□□ -1.09
RNF43-208ENST00000584437 A0A1B0GU33 70 aa8.22□□□□□ -1.09
RNF43-208ENST00000584437 HRES1P13985 223 aa8.22□□□□□ -1.09
RNF43-208ENST00000584437 CR1P17927 2039 aa8.21□□□□□ -1.1
RNF43-208ENST00000584437 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.1
RNF43-208ENST00000584437 MMP24-AS1A0A0U1RRL7 71 aa8.19□□□□□ -1.1
RNF43-208ENST00000584437 FASNP49327 2511 aaKnown RBP8.19□□□□□ -1.1
RNF43-208ENST00000584437 J3QL48 77 aa8.17□□□□□ -1.1
RNF43-208ENST00000584437 Q5VV11 94 aa8.17□□□□□ -1.1
RNF43-208ENST00000584437 EP400Q96L91 3159 aa8.15□□□□□ -1.11
RNF43-208ENST00000584437 SPRR1AP35321 89 aa8.14□□□□□ -1.11
RNF43-208ENST00000584437 SMR3BP02814 79 aaPredicted RBP8.11□□□□□ -1.11
RNF43-208ENST00000584437 PRAC1Q96KF2 57 aa8.1□□□□□ -1.11
RNF43-208ENST00000584437 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
RNF43-208ENST00000584437 USP24Q9UPU5 2620 aa8.09□□□□□ -1.11
RNF43-208ENST00000584437 Q8NDZ9 215 aa8.09□□□□□ -1.11
RNF43-208ENST00000584437 H3BS24 57 aa8.08□□□□□ -1.12
RNF43-208ENST00000584437 SPRR1BP22528 89 aa8.08□□□□□ -1.12
RNF43-208ENST00000584437 KRTAP1-3Q8IUG1 177 aa8.08□□□□□ -1.12
RNF43-208ENST00000584437 LINC00472Q9H8W2 130 aa8.08□□□□□ -1.12
RNF43-208ENST00000584437 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
RNF43-208ENST00000584437 SPINK7P58062 85 aa8.05□□□□□ -1.12
RNF43-208ENST00000584437 OXTP01178 125 aa8.05□□□□□ -1.12
RNF43-208ENST00000584437 KRTAP1-1Q07627 177 aa8.04□□□□□ -1.12
RNF43-208ENST00000584437 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
RNF43-208ENST00000584437 LINC00483Q53H64 154 aa8.03□□□□□ -1.12
RNF43-208ENST00000584437 CSAG1Q6PB30 78 aa8.03□□□□□ -1.12
RNF43-208ENST00000584437 Q5W150 140 aa8.03□□□□□ -1.12
RNF43-208ENST00000584437 PRRC2CQ9Y520 2896 aaKnown RBP8.02□□□□□ -1.13
RNF43-208ENST00000584437 MGAM2Q2M2H8 2515 aa8.01□□□□□ -1.13
RNF43-208ENST00000584437 CAMK2N1Q7Z7J9 78 aa8.01□□□□□ -1.13
RNF43-208ENST00000584437 Q6ZSA8 131 aa8□□□□□ -1.13
RNF43-208ENST00000584437 PLAC8Q9NZF1 115 aa7.99□□□□□ -1.13
RNF43-208ENST00000584437 EPG5Q9HCE0 2579 aa7.98□□□□□ -1.13
RNF43-208ENST00000584437 A0A0A0MQY5 61 aa7.97□□□□□ -1.13
RNF43-208ENST00000584437 GOLGB1Q14789 3259 aaKnown RBP7.97□□□□□ -1.13
RNF43-208ENST00000584437 TNP2Q05952 138 aa7.97□□□□□ -1.13
RNF43-208ENST00000584437 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
RNF43-208ENST00000584437 BPTFQ12830 3046 aa7.94□□□□□ -1.14
RNF43-208ENST00000584437 S4R3F8 94 aa7.92□□□□□ -1.14
RNF43-208ENST00000584437 KRTAP26-1Q6PEX3 210 aa7.9□□□□□ -1.14
RNF43-208ENST00000584437 RPL37P61927 97 aaKnown RBP7.88□□□□□ -1.15
RNF43-208ENST00000584437 Q6ZR54 194 aa7.88□□□□□ -1.15
RNF43-208ENST00000584437 ROMO1P60602 79 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms