RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 Q6ZRX8 168 aa11.84□□□□□ -0.51
SS18-224ENST00000584083 SPANXCQ9NY87 97 aa11.84□□□□□ -0.51
SS18-224ENST00000584083 ERC2-IT1O76042 136 aa11.83□□□□□ -0.52
SS18-224ENST00000584083 GAGE2AQ6NT46 116 aa11.83□□□□□ -0.52
SS18-224ENST00000584083 ATOH7Q8N100 152 aa11.83□□□□□ -0.52
SS18-224ENST00000584083 OR13C6PQ8NH95 151 aa11.83□□□□□ -0.52
SS18-224ENST00000584083 S100A1P23297 94 aa11.82□□□□□ -0.52
SS18-224ENST00000584083 RETNLBQ9BQ08 111 aa11.82□□□□□ -0.52
SS18-224ENST00000584083 Q9BRP9 147 aa11.82□□□□□ -0.52
SS18-224ENST00000584083 CBY1Q9Y3M2 126 aa11.82□□□□□ -0.52
SS18-224ENST00000584083 RNF213Q63HN8 5207 aa11.81□□□□□ -0.52
SS18-224ENST00000584083 ZNF73O43830 326 aaPredicted RBP11.81□□□□□ -0.52
SS18-224ENST00000584083 JOSD1Q15040 202 aaPredicted RBP11.81□□□□□ -0.52
SS18-224ENST00000584083 ANKRD39Q53RE8 183 aa11.81□□□□□ -0.52
SS18-224ENST00000584083 SCGB1D4Q6XE38 83 aa11.81□□□□□ -0.52
SS18-224ENST00000584083 C4orf48Q5BLP8 95 aa11.8□□□□□ -0.52
SS18-224ENST00000584083 SPAG11AQ6PDA7 123 aa11.8□□□□□ -0.52
SS18-224ENST00000584083 HINT1P49773 126 aaPredicted RBP11.79□□□□□ -0.52
SS18-224ENST00000584083 AKR1D1P51857 326 aa11.79□□□□□ -0.52
SS18-224ENST00000584083 CTAG1AP78358 180 aa11.79□□□□□ -0.52
SS18-224ENST00000584083 LINC00483Q53H64 154 aa11.79□□□□□ -0.52
SS18-224ENST00000584083 Q8NBF4 154 aa11.77□□□□□ -0.53
SS18-224ENST00000584083 S100A2P29034 98 aa11.76□□□□□ -0.53
SS18-224ENST00000584083 SPANXDQ9BXN6 97 aa11.76□□□□□ -0.53
SS18-224ENST00000584083 LINC00518Q8N0U6 118 aa11.75□□□□□ -0.53
SS18-224ENST00000584083 HIST3H2BBQ8N257 126 aa11.75□□□□□ -0.53
SS18-224ENST00000584083 IGLV9-49A0A0B4J1Y8 123 aa11.74□□□□□ -0.53
SS18-224ENST00000584083 MOBPQ13875 183 aa11.73□□□□□ -0.53
SS18-224ENST00000584083 PCP2Q8IVA1 136 aa11.73□□□□□ -0.53
SS18-224ENST00000584083 COPS9Q8WXC6 57 aa11.73□□□□□ -0.53
SS18-224ENST00000584083 HIST1H2BLQ99880 126 aa11.73□□□□□ -0.53
SS18-224ENST00000584083 SNRPEP62304 92 aaKnown RBP11.72□□□□□ -0.53
SS18-224ENST00000584083 S100A6P06703 90 aa11.71□□□□□ -0.53
SS18-224ENST00000584083 IGLV7-46A0A075B6I9 117 aa11.7□□□□□ -0.54
SS18-224ENST00000584083 IFITM1P13164 125 aa11.7□□□□□ -0.54
SS18-224ENST00000584083 Q6ZVH6 145 aa11.69□□□□□ -0.54
SS18-224ENST00000584083 SSBP3-AS1Q7Z2R9 100 aa11.69□□□□□ -0.54
SS18-224ENST00000584083 ST20-AS1Q8NBB2 130 aa11.69□□□□□ -0.54
SS18-224ENST00000584083 SPINK1P00995 79 aa11.67□□□□□ -0.54
SS18-224ENST00000584083 C6orf99Q4VX62 202 aa11.67□□□□□ -0.54
SS18-224ENST00000584083 MUSTN1Q8IVN3 82 aa11.67□□□□□ -0.54
SS18-224ENST00000584083 DHRS4-AS1Q9P1J3 65 aa11.67□□□□□ -0.54
SS18-224ENST00000584083 C5orf52A6NGY3 159 aa11.66□□□□□ -0.54
SS18-224ENST00000584083 HSBP1L1C9JCN9 74 aa11.66□□□□□ -0.54
SS18-224ENST00000584083 COX7BP24311 80 aa11.66□□□□□ -0.54
SS18-224ENST00000584083 C9orf153Q5TBE3 101 aa11.66□□□□□ -0.54
SS18-224ENST00000584083 A6NDN8 102 aa11.65□□□□□ -0.54
SS18-224ENST00000584083 CDIP1Q9H305 208 aa11.64□□□□□ -0.55
SS18-224ENST00000584083 ELOF1P60002 83 aaKnown RBP11.63□□□□□ -0.55
SS18-224ENST00000584083 TPRXLQ17RH7 258 aa11.63□□□□□ -0.55
SS18-224ENST00000584083 FP248Q71RG6 208 aaPredicted RBP11.6□□□□□ -0.55
SS18-224ENST00000584083 TRBV7-6A0A0J9YX20 115 aa11.59□□□□□ -0.55
SS18-224ENST00000584083 SLC25A34Q6PIV7 304 aa11.59□□□□□ -0.55
SS18-224ENST00000584083 SCGB1D1O95968 90 aa11.58□□□□□ -0.56
SS18-224ENST00000584083 TRAV13-2A0A0B4J235 113 aa11.57□□□□□ -0.56
SS18-224ENST00000584083 SPRR1BP22528 89 aa11.57□□□□□ -0.56
SS18-224ENST00000584083 TAL2Q16559 108 aa11.57□□□□□ -0.56
SS18-224ENST00000584083 DEFB105AQ8NG35 78 aa11.57□□□□□ -0.56
SS18-224ENST00000584083 A0A1B0GWB2 263 aa11.56□□□□□ -0.56
SS18-224ENST00000584083 RPS29P62273 56 aaKnown RBP11.56□□□□□ -0.56
SS18-224ENST00000584083 LAMTOR3Q9UHA4 124 aa11.56□□□□□ -0.56
SS18-224ENST00000584083 Q8N377 158 aa11.54□□□□□ -0.56
SS18-224ENST00000584083 SLC25A20O43772 301 aa11.53□□□□□ -0.56
SS18-224ENST00000584083 SMIM11BQ8TCY0 68 aa11.53□□□□□ -0.56
SS18-224ENST00000584083 TEX49A0A1B0GTD5 131 aa11.51□□□□□ -0.57
SS18-224ENST00000584083 A4D1N5 150 aa11.51□□□□□ -0.57
SS18-224ENST00000584083 Q1RN00 199 aa11.51□□□□□ -0.57
SS18-224ENST00000584083 KRTAP13-3Q3SY46 172 aa11.48□□□□□ -0.57
SS18-224ENST00000584083 HRCT1Q6UXD1 115 aa11.48□□□□□ -0.57
SS18-224ENST00000584083 NHP2Q9NX24 153 aaKnown RBP11.47□□□□□ -0.57
SS18-224ENST00000584083 VAMP3Q15836 100 aa11.46□□□□□ -0.57
SS18-224ENST00000584083 HIST1H4GQ99525 98 aa11.46□□□□□ -0.57
SS18-224ENST00000584083 COX8AP10176 69 aa11.45□□□□□ -0.58
SS18-224ENST00000584083 IGLV5-48A0A075B6I7 105 aa11.44□□□□□ -0.58
SS18-224ENST00000584083 PRO1933Q9H354 126 aa11.44□□□□□ -0.58
SS18-224ENST00000584083 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
SS18-224ENST00000584083 LIMD2Q9BT23 127 aa11.43□□□□□ -0.58
SS18-224ENST00000584083 LINC01547P58512 204 aaPredicted RBP11.42□□□□□ -0.58
SS18-224ENST00000584083 SMIM29Q86T20 159 aa11.42□□□□□ -0.58
SS18-224ENST00000584083 MUC2Q02817 5179 aa11.42□□□□□ -0.58
SS18-224ENST00000584083 C12orf57Q99622 126 aa11.41□□□□□ -0.58
SS18-224ENST00000584083 DLEU1O43261 78 aa11.39□□□□□ -0.59
SS18-224ENST00000584083 C14orf144Q96I85 54 aa11.39□□□□□ -0.59
SS18-224ENST00000584083 PAM16Q9Y3D7 125 aa11.39□□□□□ -0.59
SS18-224ENST00000584083 H7C2G1 150 aa11.38□□□□□ -0.59
SS18-224ENST00000584083 CD164Q04900 197 aa11.38□□□□□ -0.59
SS18-224ENST00000584083 LINC00575Q6W349 94 aa11.38□□□□□ -0.59
SS18-224ENST00000584083 SPATA45Q537H7 98 aa11.37□□□□□ -0.59
SS18-224ENST00000584083 VAMP8Q9BV40 100 aa11.36□□□□□ -0.59
SS18-224ENST00000584083 hADV29S1A0JD25 119 aa11.35□□□□□ -0.59
SS18-224ENST00000584083 MUC17Q685J3 4493 aa11.33□□□□□ -0.6
SS18-224ENST00000584083 A0A0G2JQZ4 141 aa11.33□□□□□ -0.6
SS18-224ENST00000584083 F8WEM9 126 aa11.32□□□□□ -0.6
SS18-224ENST00000584083 Q6ZQY7 126 aa11.32□□□□□ -0.6
SS18-224ENST00000584083 ASB16-AS1Q495Z4 193 aa11.31□□□□□ -0.6
SS18-224ENST00000584083 BVES-AS1Q5T3Y7 98 aa11.31□□□□□ -0.6
SS18-224ENST00000584083 HIGD1BQ9P298 99 aa11.31□□□□□ -0.6
SS18-224ENST00000584083 SEC61BP60468 96 aaKnown RBP11.3□□□□□ -0.6
SS18-224ENST00000584083 RAB37Q96AX2 223 aa11.3□□□□□ -0.6
SS18-224ENST00000584083 CFC1BP0CG36 223 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms