RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	GAGE4	Q13068	117 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	GAGE5	Q13069	117 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	MIA	Q16674	131 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	LINC00242	Q5T6M2	205 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	SOSTDC1	Q6X4U4	206 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	FAM19A3	Q7Z5A8	133 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	LINC00337	Q8N6G1	96 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	DPH3	Q96FX2	82 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	TMEM101	Q96IK0	257 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	TRBV10-1	A0A0K0K1A3	114 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	GAGE12H	A6NDE8	117 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	SMIM1	B2RUZ4	78 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	TMEM238	C9JI98	176 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	NDUFA1	O15239	70 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	TIMM17B	O60830	172 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	RPL36A	P83881	106 aa	Known RBP	2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	ANKRD29	Q8N6D5	301 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	DAND5	Q8N907	189 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	RPL36AL	Q969Q0	106 aa	Known RBP	2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	GTSF1L	Q9H1H1	148 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	GEMIN7	Q9H840	131 aa	Known RBP	2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	CDC42SE2	Q9NRR3	84 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	ERG28	Q9UKR5	140 aa		2.78	□□□□□ -1.96
MSI2-216	ENST00000582772	AHNAK	Q09666	5890 aa	Known RBP	2.78	□□□□□ -1.97
MSI2-216	ENST00000582772	TRBV20-1	A0A075B6N2	111 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	TRGV2	A0A075B6R0	118 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	TRAV13-1	A0A0B4J241	112 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	TRBV30	A0A0K0K1B3	111 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772		C9JAW5	83 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772		H3BS24	57 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772		M0QXV9	152 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	MT1F	P04733	61 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	PRSS2	P07478	247 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	SCGB1C2	P0DMR2	95 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	FHL2	Q14192	279 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	LYRM7	Q5U5X0	104 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	TEN1	Q86WV5	123 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	PPDPFL	Q8WWR9	84 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	CLEC2B	Q92478	149 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	ZNF625	Q96I27	306 aa	Predicted RBP	2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	SIGMAR1	Q99720	223 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	TMEM243	Q9BU79	118 aa		2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	CSDC2	Q9Y534	153 aa	Known RBP	2.77	□□□□□ -1.97
MSI2-216	ENST00000582772	IGLV4-60	A0A075B6I1	120 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	IGKV2D-24	A0A075B6R9	120 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772		A0A0U1RRA0	63 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	USP17L23	D6RBM5	183 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	SLC25A20	O43772	301 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	MT-ATP8	P03928	68 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	IFITM1	P13164	125 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	HERVK_113	P63121	156 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	SMAGP	Q0VAQ4	97 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	GAGE6	Q13070	117 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	FP248	Q71RG6	208 aa	Predicted RBP	2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	DAZ4	Q86SG3	579 aa	Known RBP	2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	LINC00308	Q8TCZ7	52 aa		2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	DAZ3	Q9NR90	486 aa	Known RBP	2.76	□□□□□ -1.97
MSI2-216	ENST00000582772	TRBV10-2	A0A0K0K1G8	114 aa		2.75	□□□□□ -1.97
MSI2-216	ENST00000582772	TRBV6-4	A0A1B0GX49	114 aa		2.75	□□□□□ -1.97
MSI2-216	ENST00000582772		H7C423	109 aa		2.75	□□□□□ -1.97
MSI2-216	ENST00000582772		J3QR89	54 aa		2.75	□□□□□ -1.97
MSI2-216	ENST00000582772	SCGB1A1	P11684	91 aa		2.75	□□□□□ -1.97
MSI2-216	ENST00000582772	ATXN8	Q156A1	80 aa		2.75	□□□□□ -1.97
MSI2-216	ENST00000582772		Q1RN00	199 aa		2.75	□□□□□ -1.97
MSI2-216	ENST00000582772	COX6B2	Q6YFQ2	88 aa		2.75	□□□□□ -1.97
MSI2-216	ENST00000582772	TRBV6-8	A0A0A6YYG3	113 aa		2.74	□□□□□ -1.97
MSI2-216	ENST00000582772	IGHV3OR16-9	A0A0B4J2B5	98 aa		2.74	□□□□□ -1.97
MSI2-216	ENST00000582772	TRGV4	A0A0C4DH28	118 aa		2.74	□□□□□ -1.97
MSI2-216	ENST00000582772	LST1	O00453	97 aa		2.74	□□□□□ -1.97
MSI2-216	ENST00000582772	KRTAP4-11	Q9BYQ6	195 aa		2.74	□□□□□ -1.97
MSI2-216	ENST00000582772	C22orf24	Q9Y442	160 aa		2.74	□□□□□ -1.97
MSI2-216	ENST00000582772	IGKV2-28	A0A075B6P5	120 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772	IGKV3OR2-268	A0A0C4DH90	116 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772	TEX49	A0A1B0GTD5	131 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772	LINC00959	A0A1B0GUT2	108 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772	UBE2L6	O14933	153 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772	CIDEA	O60543	219 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772	IGKV2D-28	P01615	120 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772	C5orf38	Q86SI9	138 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772	COX7B2	Q8TF08	81 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772	FAM218A	Q96MZ4	157 aa		2.73	□□□□□ -1.97
MSI2-216	ENST00000582772		A0A087WZ39	114 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772		H3BT86	120 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	COX7A2L	O14548	114 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	SPRR2D	P22532	72 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	HERV-K104	P63124	156 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	MEIG1	Q5JSS6	88 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	C2orf82	Q6UX34	121 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	MIR7-3HG	Q8N6C7	128 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	UBE2W	Q96B02	151 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	CHCHD5	Q9BSY4	110 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	TOMM7	Q9P0U1	55 aa		2.72	□□□□□ -1.97
MSI2-216	ENST00000582772	LCE1A	Q5T7P2	110 aa		2.71	□□□□□ -1.98
MSI2-216	ENST00000582772	CLPSL2	Q6UWE3	100 aa		2.71	□□□□□ -1.98
MSI2-216	ENST00000582772	IGLV8-61	A0A075B6I0	122 aa		2.7	□□□□□ -1.98
MSI2-216	ENST00000582772	TRAV8-4	A0A0B4J246	113 aa		2.7	□□□□□ -1.98
MSI2-216	ENST00000582772		A0A1B0GUV1	79 aa		2.7	□□□□□ -1.98
MSI2-216	ENST00000582772	IGLV7-43	P04211	117 aa		2.7	□□□□□ -1.98
MSI2-216	ENST00000582772	COX6C	P09669	75 aa		2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms