RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SOSTDC1	Q6X4U4	206 aa		7.28	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	C3orf22	Q8N5N4	141 aa		7.28	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	LITAF	Q99732	161 aa		7.28	□□□□□ -1.24
CDK5RAP3-222	ENST00000581708	ZNF815P	A8K554	130 aa		7.27	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	ZNF73	O43830	326 aa	Predicted RBP	7.27	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	HINT1	P49773	126 aa	Predicted RBP	7.27	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	C4orf48	Q5BLP8	95 aa		7.27	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	LINC00308	Q8TCZ7	52 aa		7.27	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	KRTDAP	P60985	99 aa		7.26	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	LINC00518	Q8N0U6	118 aa		7.26	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	COPS9	Q8WXC6	57 aa		7.26	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	PPDPF	Q9H3Y8	114 aa		7.26	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	SPINK1	P00995	79 aa		7.25	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	SSBP3-AS1	Q7Z2R9	100 aa		7.25	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708		Q9BRP9	147 aa		7.25	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	EIF4EBP3	O60516	100 aa	Predicted RBP	7.24	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	SNRPE	P62304	92 aa	Known RBP	7.24	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	TPRXL	Q17RH7	258 aa		7.24	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	SPANXD	Q9BXN6	97 aa		7.24	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	ERC2-IT1	O76042	136 aa		7.23	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	NPC2	P61916	151 aa		7.23	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	RPS29	P62273	56 aa	Known RBP	7.23	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	GAGE2A	Q6NT46	116 aa		7.23	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708		Q6ZVH6	145 aa		7.23	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	FP248	Q71RG6	208 aa	Predicted RBP	7.23	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708		Q8NBF4	154 aa		7.23	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	IFITM1	P13164	125 aa		7.22	□□□□□ -1.25
CDK5RAP3-222	ENST00000581708	IGLV7-46	A0A075B6I9	117 aa		7.21	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	S100A1	P23297	94 aa		7.21	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	SCGB1D4	Q6XE38	83 aa		7.21	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	OR13C6P	Q8NH95	151 aa		7.21	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	DHRS4-AS1	Q9P1J3	65 aa		7.21	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	RETNLB	Q9BQ08	111 aa		7.2	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	TRBV7-6	A0A0J9YX20	115 aa		7.19	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	SLC25A34	Q6PIV7	304 aa		7.19	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	TTTY13	Q9BZ97	58 aa		7.19	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	MOBP	Q13875	183 aa		7.18	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	ANKRD39	Q53RE8	183 aa		7.18	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	CDIP1	Q9H305	208 aa		7.18	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	IGLV9-49	A0A0B4J1Y8	123 aa		7.17	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	SPRR1B	P22528	89 aa		7.17	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708		A0A0U1RQV1	116 aa		7.16	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	S100A2	P29034	98 aa		7.16	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	ELOF1	P60002	83 aa	Known RBP	7.16	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	MUC2	Q02817	5179 aa		7.16	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	COX7B	P24311	80 aa		7.15	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	HIST3H2BB	Q8N257	126 aa		7.15	□□□□□ -1.26
CDK5RAP3-222	ENST00000581708	SLC25A20	O43772	301 aa		7.14	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	C6orf99	Q4VX62	202 aa		7.14	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	ATOH7	Q8N100	152 aa		7.14	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	HIST1H2BL	Q99880	126 aa		7.14	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708		A4D1N5	150 aa		7.13	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	C9orf153	Q5TBE3	101 aa		7.13	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	PCP2	Q8IVA1	136 aa		7.13	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	ST20-AS1	Q8NBB2	130 aa		7.13	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	TRAV13-2	A0A0B4J235	113 aa		7.12	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708		A0A1B0GWB2	263 aa		7.12	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	HSBP1L1	C9JCN9	74 aa		7.12	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	S100A6	P06703	90 aa		7.12	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	MUSTN1	Q8IVN3	82 aa		7.12	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708		Q8N377	158 aa		7.12	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	LAMTOR3	Q9UHA4	124 aa		7.12	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708		A6NDN8	102 aa		7.11	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	KRTAP13-3	Q3SY46	172 aa		7.1	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	TEX49	A0A1B0GTD5	131 aa		7.09	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	TAL2	Q16559	108 aa		7.09	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	NHP2	Q9NX24	153 aa	Known RBP	7.09	□□□□□ -1.27
CDK5RAP3-222	ENST00000581708	LIMD2	Q9BT23	127 aa		7.08	□□□□□ -1.28
CDK5RAP3-222	ENST00000581708	IGLV5-48	A0A075B6I7	105 aa		7.07	□□□□□ -1.28
CDK5RAP3-222	ENST00000581708	CD164	Q04900	197 aa		7.07	□□□□□ -1.28
CDK5RAP3-222	ENST00000581708	VAMP3	Q15836	100 aa		7.06	□□□□□ -1.28
CDK5RAP3-222	ENST00000581708	SMIM11B	Q8TCY0	68 aa		7.05	□□□□□ -1.28
CDK5RAP3-222	ENST00000581708	PRO1933	Q9H354	126 aa		7.05	□□□□□ -1.28
CDK5RAP3-222	ENST00000581708	ASB16-AS1	Q495Z4	193 aa		7.03	□□□□□ -1.28
CDK5RAP3-222	ENST00000581708	DEFB105A	Q8NG35	78 aa		7.03	□□□□□ -1.28
CDK5RAP3-222	ENST00000581708	DLEU1	O43261	78 aa		7.02	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	SCGB1D1	O95968	90 aa		7.02	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	LINC01547	P58512	204 aa	Predicted RBP	7.02	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	SEC61B	P60468	96 aa	Known RBP	7.02	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708		Q5XG85	94 aa		7.02	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	SMIM29	Q86T20	159 aa		7.02	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708		Q1RN00	199 aa		7.01	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	MUC17	Q685J3	4493 aa		7.01	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708		H7C2G1	150 aa		7	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	COX8A	P10176	69 aa		7	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	XP32	Q5T750	250 aa		6.99	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	LINC00575	Q6W349	94 aa		6.99	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	HIST1H4G	Q99525	98 aa		6.98	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	hADV29S1	A0JD25	119 aa		6.97	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	BVES-AS1	Q5T3Y7	98 aa		6.97	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	HRCT1	Q6UXD1	115 aa		6.97	□□□□□ -1.29
CDK5RAP3-222	ENST00000581708	PPDPFL	Q8WWR9	84 aa		6.96	□□□□□ -1.3
CDK5RAP3-222	ENST00000581708	FAT4	Q6V0I7	4981 aa		6.95	□□□□□ -1.3
CDK5RAP3-222	ENST00000581708		F8WEM9	126 aa		6.95	□□□□□ -1.3
CDK5RAP3-222	ENST00000581708	HIGD1B	Q9P298	99 aa		6.95	□□□□□ -1.3
CDK5RAP3-222	ENST00000581708		Q6JHZ5	121 aa		6.94	□□□□□ -1.3
CDK5RAP3-222	ENST00000581708	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	6.94	□□□□□ -1.3
CDK5RAP3-222	ENST00000581708	LCE2A	Q5TA79	106 aa	Predicted RBP	6.93	□□□□□ -1.3
CDK5RAP3-222	ENST00000581708		Q6ZQY7	126 aa		6.93	□□□□□ -1.3
CDK5RAP3-222	ENST00000581708	IGLV8-61	A0A075B6I0	122 aa		6.92	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms