RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 HIST1H2BLQ99880 126 aa3.89□□□□□ -1.79
TRAF4-213ENST00000578917 TRAV23DV6A0A075B6W5 121 aa3.88□□□□□ -1.79
TRAF4-213ENST00000578917 SCGB1D1O95968 90 aa3.88□□□□□ -1.79
TRAF4-213ENST00000578917 C4orf48Q5BLP8 95 aa3.88□□□□□ -1.79
TRAF4-213ENST00000578917 LINC00518Q8N0U6 118 aa3.88□□□□□ -1.79
TRAF4-213ENST00000578917 PPDPFQ9H3Y8 114 aa3.88□□□□□ -1.79
TRAF4-213ENST00000578917 SPANXCQ9NY87 97 aa3.88□□□□□ -1.79
TRAF4-213ENST00000578917 UBR4Q5T4S7 5183 aa3.87□□□□□ -1.79
TRAF4-213ENST00000578917 A6NDN8 102 aa3.87□□□□□ -1.79
TRAF4-213ENST00000578917 B5MCH6 92 aa3.87□□□□□ -1.79
TRAF4-213ENST00000578917 ZNF73O43830 326 aaPredicted RBP3.87□□□□□ -1.79
TRAF4-213ENST00000578917 EIF4EBP3O60516 100 aaPredicted RBP3.87□□□□□ -1.79
TRAF4-213ENST00000578917 IGLV6-57P01721 117 aa3.87□□□□□ -1.79
TRAF4-213ENST00000578917 ANKRD39Q53RE8 183 aa3.87□□□□□ -1.79
TRAF4-213ENST00000578917 GAGE2AQ6NT46 116 aa3.87□□□□□ -1.79
TRAF4-213ENST00000578917 SOSTDC1Q6X4U4 206 aa3.87□□□□□ -1.79
TRAF4-213ENST00000578917 IFITM1P13164 125 aa3.86□□□□□ -1.79
TRAF4-213ENST00000578917 SPRR1AP35321 89 aa3.86□□□□□ -1.79
TRAF4-213ENST00000578917 PCP2Q8IVA1 136 aa3.86□□□□□ -1.79
TRAF4-213ENST00000578917 LINC00304Q8N9R0 145 aa3.86□□□□□ -1.79
TRAF4-213ENST00000578917 SPRR4Q96PI1 79 aa3.86□□□□□ -1.79
TRAF4-213ENST00000578917 LITAFQ99732 161 aa3.86□□□□□ -1.79
TRAF4-213ENST00000578917 SPANXDQ9BXN6 97 aa3.86□□□□□ -1.79
TRAF4-213ENST00000578917 KRTAP4-16G5E9R7 235 aaPredicted RBP3.85□□□□□ -1.79
TRAF4-213ENST00000578917 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
TRAF4-213ENST00000578917 Q6ZRX8 168 aa3.85□□□□□ -1.79
TRAF4-213ENST00000578917 Q6ZVH6 145 aa3.85□□□□□ -1.79
TRAF4-213ENST00000578917 MUSTN1Q8IVN3 82 aa3.85□□□□□ -1.79
TRAF4-213ENST00000578917 IGLV9-49A0A0B4J1Y8 123 aa3.84□□□□□ -1.79
TRAF4-213ENST00000578917 C3orf22Q8N5N4 141 aa3.84□□□□□ -1.79
TRAF4-213ENST00000578917 ERC2-IT1O76042 136 aa3.83□□□□□ -1.8
TRAF4-213ENST00000578917 COX7BP24311 80 aa3.83□□□□□ -1.8
TRAF4-213ENST00000578917 SPAG11AQ6PDA7 123 aa3.83□□□□□ -1.8
TRAF4-213ENST00000578917 Q9BRP9 147 aa3.83□□□□□ -1.8
TRAF4-213ENST00000578917 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
TRAF4-213ENST00000578917 TNXBP22105 4242 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 TRAV13-2A0A0B4J235 113 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 C5orf52A6NGY3 159 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 VAMP3Q15836 100 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 TAL2Q16559 108 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 C6orf99Q4VX62 202 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 C9orf153Q5TBE3 101 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 Q8NBF4 154 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 DEFB105AQ8NG35 78 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 HIST1H4GQ99525 98 aa3.82□□□□□ -1.8
TRAF4-213ENST00000578917 MOBPQ13875 183 aa3.81□□□□□ -1.8
TRAF4-213ENST00000578917 LINC00483Q53H64 154 aa3.81□□□□□ -1.8
TRAF4-213ENST00000578917 SLC25A34Q6PIV7 304 aa3.81□□□□□ -1.8
TRAF4-213ENST00000578917 ST20-AS1Q8NBB2 130 aa3.81□□□□□ -1.8
TRAF4-213ENST00000578917 RETNLBQ9BQ08 111 aa3.81□□□□□ -1.8
TRAF4-213ENST00000578917 LCE2BO14633 110 aa3.8□□□□□ -1.8
TRAF4-213ENST00000578917 SLC25A20O43772 301 aa3.8□□□□□ -1.8
TRAF4-213ENST00000578917 SPINK1P00995 79 aa3.8□□□□□ -1.8
TRAF4-213ENST00000578917 SSBP3-AS1Q7Z2R9 100 aa3.8□□□□□ -1.8
TRAF4-213ENST00000578917 LRP2P98164 4655 aa3.8□□□□□ -1.8
TRAF4-213ENST00000578917 IGLV7-46A0A075B6I9 117 aa3.79□□□□□ -1.8
TRAF4-213ENST00000578917 TRBV7-6A0A0J9YX20 115 aa3.79□□□□□ -1.8
TRAF4-213ENST00000578917 A0A1B0GWB2 263 aa3.79□□□□□ -1.8
TRAF4-213ENST00000578917 ELOF1P60002 83 aaKnown RBP3.79□□□□□ -1.8
TRAF4-213ENST00000578917 CTAG1AP78358 180 aa3.79□□□□□ -1.8
TRAF4-213ENST00000578917 C14orf144Q96I85 54 aa3.79□□□□□ -1.8
TRAF4-213ENST00000578917 VAMP8Q9BV40 100 aa3.79□□□□□ -1.8
TRAF4-213ENST00000578917 NHP2Q9NX24 153 aaKnown RBP3.79□□□□□ -1.8
TRAF4-213ENST00000578917 LAMTOR3Q9UHA4 124 aa3.79□□□□□ -1.8
TRAF4-213ENST00000578917 PAM16Q9Y3D7 125 aa3.79□□□□□ -1.8
TRAF4-213ENST00000578917 A4D1N5 150 aa3.78□□□□□ -1.8
TRAF4-213ENST00000578917 COX8AP10176 69 aa3.78□□□□□ -1.8
TRAF4-213ENST00000578917 SPATA45Q537H7 98 aa3.78□□□□□ -1.8
TRAF4-213ENST00000578917 SMIM11BQ8TCY0 68 aa3.78□□□□□ -1.8
TRAF4-213ENST00000578917 CDIP1Q9H305 208 aa3.78□□□□□ -1.8
TRAF4-213ENST00000578917 TMA7Q9Y2S6 64 aaKnown RBP3.78□□□□□ -1.8
TRAF4-213ENST00000578917 RNF213Q63HN8 5207 aa3.77□□□□□ -1.81
TRAF4-213ENST00000578917 TEX49A0A1B0GTD5 131 aa3.77□□□□□ -1.81
TRAF4-213ENST00000578917 H7C2G1 150 aa3.77□□□□□ -1.81
TRAF4-213ENST00000578917 Q1RN00 199 aa3.77□□□□□ -1.81
TRAF4-213ENST00000578917 C12orf57Q99622 126 aa3.77□□□□□ -1.81
TRAF4-213ENST00000578917 DLEU1O43261 78 aa3.76□□□□□ -1.81
TRAF4-213ENST00000578917 SNCGO76070 127 aa3.76□□□□□ -1.81
TRAF4-213ENST00000578917 HRCT1Q6UXD1 115 aa3.76□□□□□ -1.81
TRAF4-213ENST00000578917 RAB37Q96AX2 223 aa3.76□□□□□ -1.81
TRAF4-213ENST00000578917 PRO1933Q9H354 126 aa3.75□□□□□ -1.81
TRAF4-213ENST00000578917 hADV29S1A0JD25 119 aa3.74□□□□□ -1.81
TRAF4-213ENST00000578917 F8WEM9 126 aa3.74□□□□□ -1.81
TRAF4-213ENST00000578917 SPRR1BP22528 89 aa3.74□□□□□ -1.81
TRAF4-213ENST00000578917 BVES-AS1Q5T3Y7 98 aa3.74□□□□□ -1.81
TRAF4-213ENST00000578917 FP248Q71RG6 208 aaPredicted RBP3.74□□□□□ -1.81
TRAF4-213ENST00000578917 TMEM238LA0A1B0GVL6 79 aa3.73□□□□□ -1.81
TRAF4-213ENST00000578917 A6NJY4 79 aa3.73□□□□□ -1.81
TRAF4-213ENST00000578917 LINC00575Q6W349 94 aa3.73□□□□□ -1.81
TRAF4-213ENST00000578917 LIMD2Q9BT23 127 aa3.73□□□□□ -1.81
TRAF4-213ENST00000578917 HIGD1BQ9P298 99 aa3.73□□□□□ -1.81
TRAF4-213ENST00000578917 CFC1BP0CG36 223 aa3.72□□□□□ -1.81
TRAF4-213ENST00000578917 CFC1P0CG37 223 aa3.72□□□□□ -1.81
TRAF4-213ENST00000578917 RPS29P62273 56 aaKnown RBP3.72□□□□□ -1.81
TRAF4-213ENST00000578917 TPRXLQ17RH7 258 aa3.72□□□□□ -1.81
TRAF4-213ENST00000578917 SNHG12Q9BXW3 62 aa3.72□□□□□ -1.81
TRAF4-213ENST00000578917 IGLV5-48A0A075B6I7 105 aa3.71□□□□□ -1.82
TRAF4-213ENST00000578917 H0YGX0 51 aa3.71□□□□□ -1.82
TRAF4-213ENST00000578917 PYY3Q5JQD4 70 aa3.71□□□□□ -1.82
TRAF4-213ENST00000578917 Q6ZQY7 126 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms