RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CSNK1G2-AS1Q8NCQ2 148 aa12.11□□□□□ -0.47
ATPAF1-214ENST00000576409 LAMA5O15230 3695 aa12.1□□□□□ -0.47
ATPAF1-214ENST00000576409 PCOTHQ58A44 107 aa12.1□□□□□ -0.47
ATPAF1-214ENST00000576409 RPS28P62857 69 aaKnown RBP12.09□□□□□ -0.47
ATPAF1-214ENST00000576409 FBN2P35556 2912 aa12.09□□□□□ -0.47
ATPAF1-214ENST00000576409 NSD1Q96L73 2696 aaPredicted RBP12.08□□□□□ -0.47
ATPAF1-214ENST00000576409 REG3GQ6UW15 175 aa12.08□□□□□ -0.47
ATPAF1-214ENST00000576409 ST20-AS1Q8NBB2 130 aa12.08□□□□□ -0.47
ATPAF1-214ENST00000576409 MRPL55Q7Z7F7 128 aaKnown RBP12.08□□□□□ -0.48
ATPAF1-214ENST00000576409 BAHCC1Q9P281 2608 aa12.08□□□□□ -0.48
ATPAF1-214ENST00000576409 C22orf24Q9Y442 160 aa12.08□□□□□ -0.48
ATPAF1-214ENST00000576409 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
ATPAF1-214ENST00000576409 LINC00167Q96N53 147 aa12.06□□□□□ -0.48
ATPAF1-214ENST00000576409 A0A096LNT2 108 aa12.05□□□□□ -0.48
ATPAF1-214ENST00000576409 ELOF1P60002 83 aaKnown RBP12.05□□□□□ -0.48
ATPAF1-214ENST00000576409 LINC00474Q9P2X8 69 aa12.05□□□□□ -0.48
ATPAF1-214ENST00000576409 CRYBG3Q68DQ2 2970 aa12.05□□□□□ -0.48
ATPAF1-214ENST00000576409 Q9BRP9 147 aa12.04□□□□□ -0.48
ATPAF1-214ENST00000576409 C19orf73Q9NVV2 129 aa12.04□□□□□ -0.48
ATPAF1-214ENST00000576409 Q6ZRP5 223 aa12.02□□□□□ -0.48
ATPAF1-214ENST00000576409 C14orf177Q52M58 125 aa12.02□□□□□ -0.49
ATPAF1-214ENST00000576409 PMAIP1Q13794 54 aa12.02□□□□□ -0.49
ATPAF1-214ENST00000576409 CASC2Q6XLA1 102 aa12.02□□□□□ -0.49
ATPAF1-214ENST00000576409 Q8NAQ8 132 aa12.01□□□□□ -0.49
ATPAF1-214ENST00000576409 A0A0G2JQZ4 141 aa12.01□□□□□ -0.49
ATPAF1-214ENST00000576409 A0A1W2PNN7 141 aa12.01□□□□□ -0.49
ATPAF1-214ENST00000576409 PRR15LQ9BU68 103 aa12.01□□□□□ -0.49
ATPAF1-214ENST00000576409 LOC110117498A0A087WWA1 95 aa12□□□□□ -0.49
ATPAF1-214ENST00000576409 PRO0628Q9UI54 55 aa12□□□□□ -0.49
ATPAF1-214ENST00000576409 ITPR2Q14571 2701 aa12□□□□□ -0.49
ATPAF1-214ENST00000576409 IGLV6-57P01721 117 aa12□□□□□ -0.49
ATPAF1-214ENST00000576409 IL17DQ8TAD2 202 aa12□□□□□ -0.49
ATPAF1-214ENST00000576409 FAM168BA1KXE4 195 aa11.99□□□□□ -0.49
ATPAF1-214ENST00000576409 HCG22E2RYF7 251 aa11.99□□□□□ -0.49
ATPAF1-214ENST00000576409 VPREB1P12018 145 aa11.99□□□□□ -0.49
ATPAF1-214ENST00000576409 HIVEP1P15822 2718 aa11.99□□□□□ -0.49
ATPAF1-214ENST00000576409 IGHV6-1A0A0B4J1U7 121 aa11.97□□□□□ -0.49
ATPAF1-214ENST00000576409 H0Y9P7 68 aa11.97□□□□□ -0.49
ATPAF1-214ENST00000576409 RPL37AP61513 92 aaKnown RBP11.95□□□□□ -0.5
ATPAF1-214ENST00000576409 CYSTM1Q9H1C7 97 aa11.95□□□□□ -0.5
ATPAF1-214ENST00000576409 SERTAD4-AS1Q5TG53 156 aa11.94□□□□□ -0.5
ATPAF1-214ENST00000576409 DCHS2Q6V1P9 2916 aa11.92□□□□□ -0.5
ATPAF1-214ENST00000576409 LINC01556Q5JQF7 62 aa11.92□□□□□ -0.5
ATPAF1-214ENST00000576409 RETNLBQ9BQ08 111 aa11.92□□□□□ -0.5
ATPAF1-214ENST00000576409 H7BZZ5 65 aa11.91□□□□□ -0.5
ATPAF1-214ENST00000576409 LINC00336Q6ZUF6 198 aa11.91□□□□□ -0.5
ATPAF1-214ENST00000576409 Q8NBF4 154 aa11.91□□□□□ -0.5
ATPAF1-214ENST00000576409 HRNRQ86YZ3 2850 aaPredicted RBP11.9□□□□□ -0.5
ATPAF1-214ENST00000576409 Q6ZRX8 168 aa11.9□□□□□ -0.5
ATPAF1-214ENST00000576409 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
ATPAF1-214ENST00000576409 C4orf48Q5BLP8 95 aa11.89□□□□□ -0.51
ATPAF1-214ENST00000576409 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
ATPAF1-214ENST00000576409 CUBNO60494 3623 aa11.88□□□□□ -0.51
ATPAF1-214ENST00000576409 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
ATPAF1-214ENST00000576409 K7EQZ3 153 aa11.87□□□□□ -0.51
ATPAF1-214ENST00000576409 C1orf64Q8NEQ6 169 aa11.87□□□□□ -0.51
ATPAF1-214ENST00000576409 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
ATPAF1-214ENST00000576409 KRTAP10-3P60369 221 aa11.87□□□□□ -0.51
ATPAF1-214ENST00000576409 CIRBP-AS1Q8TBR5 109 aa11.86□□□□□ -0.51
ATPAF1-214ENST00000576409 TRBV7-4A0A0J9YYF1 115 aa11.85□□□□□ -0.51
ATPAF1-214ENST00000576409 BCE1O60756 84 aa11.85□□□□□ -0.51
ATPAF1-214ENST00000576409 LINC01600Q96MT4 127 aa11.84□□□□□ -0.51
ATPAF1-214ENST00000576409 SEC61GP60059 68 aa11.83□□□□□ -0.52
ATPAF1-214ENST00000576409 GVQW2A0A096LPI5 108 aaPredicted RBP11.82□□□□□ -0.52
ATPAF1-214ENST00000576409 PHF5AQ7RTV0 110 aaKnown RBP11.82□□□□□ -0.52
ATPAF1-214ENST00000576409 PRR34Q9NV39 138 aa11.82□□□□□ -0.52
ATPAF1-214ENST00000576409 STAB2Q8WWQ8 2551 aa11.82□□□□□ -0.52
ATPAF1-214ENST00000576409 KLKP1Q107X0 134 aa11.82□□□□□ -0.52
ATPAF1-214ENST00000576409 Q8N377 158 aa11.82□□□□□ -0.52
ATPAF1-214ENST00000576409 Q8NDZ9 215 aa11.82□□□□□ -0.52
ATPAF1-214ENST00000576409 APCP25054 2843 aa11.82□□□□□ -0.52
ATPAF1-214ENST00000576409 LINC00588Q9Y4M8 146 aa11.81□□□□□ -0.52
ATPAF1-214ENST00000576409 C15orf56Q8N910 161 aa11.8□□□□□ -0.52
ATPAF1-214ENST00000576409 CELSR1Q9NYQ6 3014 aa11.79□□□□□ -0.52
ATPAF1-214ENST00000576409 SMG1Q96Q15 3661 aaKnown RBP11.79□□□□□ -0.52
ATPAF1-214ENST00000576409 OBSCN-AS1Q96MR7 158 aa11.78□□□□□ -0.52
ATPAF1-214ENST00000576409 LINC00612Q8N6U2 182 aa11.76□□□□□ -0.53
ATPAF1-214ENST00000576409 A8MUN3 132 aa11.75□□□□□ -0.53
ATPAF1-214ENST00000576409 hDV103S1A0JD37 113 aa11.74□□□□□ -0.53
ATPAF1-214ENST00000576409 ERC2-IT1O76042 136 aa11.74□□□□□ -0.53
ATPAF1-214ENST00000576409 CASC10Q5T4H9 136 aa11.74□□□□□ -0.53
ATPAF1-214ENST00000576409 SPAG11AQ6PDA7 123 aa11.74□□□□□ -0.53
ATPAF1-214ENST00000576409 KRTAP1-3Q8IUG1 177 aa11.74□□□□□ -0.53
ATPAF1-214ENST00000576409 LY6G6CO95867 125 aa11.74□□□□□ -0.53
ATPAF1-214ENST00000576409 EPM2AB3EWF7 344 aa11.73□□□□□ -0.53
ATPAF1-214ENST00000576409 F8WDY8 70 aa11.73□□□□□ -0.53
ATPAF1-214ENST00000576409 KCNQ1DNQ9H478 68 aa11.73□□□□□ -0.53
ATPAF1-214ENST00000576409 MXRA5Q9NR99 2828 aa11.7□□□□□ -0.54
ATPAF1-214ENST00000576409 A0A1W2PNM2 257 aa11.7□□□□□ -0.54
ATPAF1-214ENST00000576409 SPINK1P00995 79 aa11.7□□□□□ -0.54
ATPAF1-214ENST00000576409 KRTAP24-1Q3LI83 254 aa11.7□□□□□ -0.54
ATPAF1-214ENST00000576409 IGLV1-50A0A075B6I6 118 aa11.69□□□□□ -0.54
ATPAF1-214ENST00000576409 H3BNG1 76 aa11.69□□□□□ -0.54
ATPAF1-214ENST00000576409 MOBPQ13875 183 aa11.69□□□□□ -0.54
ATPAF1-214ENST00000576409 ZNF706Q9Y5V0 76 aaPredicted RBP11.69□□□□□ -0.54
ATPAF1-214ENST00000576409 NIPBLQ6KC79 2804 aaeCLIP11.68□□□□□ -0.54
ATPAF1-214ENST00000576409 SVEP1Q4LDE5 3571 aa11.67□□□□□ -0.54
ATPAF1-214ENST00000576409 IGFL1Q6UW32 110 aa11.66□□□□□ -0.54
ATPAF1-214ENST00000576409 KRTAP10-11P60412 298 aa11.65□□□□□ -0.54
ATPAF1-214ENST00000576409 KRTAP1-1Q07627 177 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms