RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DNAH14Q0VDD8 3507 aa8.67□□□□□ -1.02
PCDHGB3-201ENST00000576222 CDH23Q9H251 3354 aa8.66□□□□□ -1.02
PCDHGB3-201ENST00000576222 IGLV1-50A0A075B6I6 118 aa8.66□□□□□ -1.02
PCDHGB3-201ENST00000576222 OCR1Q9BZK8 76 aa8.66□□□□□ -1.02
PCDHGB3-201ENST00000576222 FRYQ5TBA9 3013 aa8.66□□□□□ -1.02
PCDHGB3-201ENST00000576222 RETNLBQ9BQ08 111 aa8.65□□□□□ -1.02
PCDHGB3-201ENST00000576222 COA5Q86WW8 74 aa8.65□□□□□ -1.03
PCDHGB3-201ENST00000576222 CENPEQ02224 2701 aa8.64□□□□□ -1.03
PCDHGB3-201ENST00000576222 FREM2Q5SZK8 3169 aa8.64□□□□□ -1.03
PCDHGB3-201ENST00000576222 A8MWP4 228 aa8.64□□□□□ -1.03
PCDHGB3-201ENST00000576222 C15orf56Q8N910 161 aa8.64□□□□□ -1.03
PCDHGB3-201ENST00000576222 A0A1W2PNM2 257 aa8.63□□□□□ -1.03
PCDHGB3-201ENST00000576222 CELSR3Q9NYQ7 3312 aa8.63□□□□□ -1.03
PCDHGB3-201ENST00000576222 IGFL1Q6UW32 110 aa8.62□□□□□ -1.03
PCDHGB3-201ENST00000576222 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
PCDHGB3-201ENST00000576222 OXTP01178 125 aa8.62□□□□□ -1.03
PCDHGB3-201ENST00000576222 LAMA1P25391 3075 aa8.62□□□□□ -1.03
PCDHGB3-201ENST00000576222 ACYP2P14621 99 aa8.62□□□□□ -1.03
PCDHGB3-201ENST00000576222 USP24Q9UPU5 2620 aa8.62□□□□□ -1.03
PCDHGB3-201ENST00000576222 A0A1B0GU69 56 aa8.61□□□□□ -1.03
PCDHGB3-201ENST00000576222 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
PCDHGB3-201ENST00000576222 CD164Q04900 197 aa8.61□□□□□ -1.03
PCDHGB3-201ENST00000576222 PHF5AQ7RTV0 110 aaKnown RBP8.61□□□□□ -1.03
PCDHGB3-201ENST00000576222 PRR15Q8IV56 129 aa8.59□□□□□ -1.03
PCDHGB3-201ENST00000576222 A0A0G2JQZ4 141 aa8.59□□□□□ -1.03
PCDHGB3-201ENST00000576222 LOC101927531A0A1B0GV80 90 aa8.59□□□□□ -1.03
PCDHGB3-201ENST00000576222 A0A1W2PNN7 141 aa8.59□□□□□ -1.03
PCDHGB3-201ENST00000576222 VCANP13611 3396 aa8.59□□□□□ -1.03
PCDHGB3-201ENST00000576222 C16orf90A8MZG2 172 aa8.59□□□□□ -1.03
PCDHGB3-201ENST00000576222 IGLV5-48A0A075B6I7 105 aa8.58□□□□□ -1.04
PCDHGB3-201ENST00000576222 SPINK1P00995 79 aa8.58□□□□□ -1.04
PCDHGB3-201ENST00000576222 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
PCDHGB3-201ENST00000576222 MOBPQ13875 183 aa8.57□□□□□ -1.04
PCDHGB3-201ENST00000576222 ATP11AUNQ6ZP68 121 aa8.57□□□□□ -1.04
PCDHGB3-201ENST00000576222 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
PCDHGB3-201ENST00000576222 AKAP13Q12802 2813 aa8.56□□□□□ -1.04
PCDHGB3-201ENST00000576222 Q1T7F1 81 aa8.55□□□□□ -1.04
PCDHGB3-201ENST00000576222 MAP1AP78559 2803 aaPredicted RBP8.55□□□□□ -1.04
PCDHGB3-201ENST00000576222 FLNAP21333 2647 aaKnown RBP8.55□□□□□ -1.04
PCDHGB3-201ENST00000576222 Q8NDZ9 215 aa8.54□□□□□ -1.04
PCDHGB3-201ENST00000576222 KTN1-AS1Q86SY8 53 aa8.54□□□□□ -1.04
PCDHGB3-201ENST00000576222 FAM229BQ4G0N7 80 aa8.53□□□□□ -1.04
PCDHGB3-201ENST00000576222 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
PCDHGB3-201ENST00000576222 CHTF8P0CG12 524 aa8.52□□□□□ -1.04
PCDHGB3-201ENST00000576222 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.05
PCDHGB3-201ENST00000576222 IGKV2-30P06310 120 aa8.52□□□□□ -1.05
PCDHGB3-201ENST00000576222 CR1P17927 2039 aa8.52□□□□□ -1.05
PCDHGB3-201ENST00000576222 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
PCDHGB3-201ENST00000576222 TLX1NBP0CAT3 122 aa8.52□□□□□ -1.05
PCDHGB3-201ENST00000576222 CHD6Q8TD26 2715 aa8.51□□□□□ -1.05
PCDHGB3-201ENST00000576222 C8orf87E5RJ46 101 aa8.51□□□□□ -1.05
PCDHGB3-201ENST00000576222 NUPR2A6NF83 97 aa8.5□□□□□ -1.05
PCDHGB3-201ENST00000576222 MRPL34Q9BQ48 92 aaKnown RBP8.5□□□□□ -1.05
PCDHGB3-201ENST00000576222 DSCR10P59022 87 aa8.49□□□□□ -1.05
PCDHGB3-201ENST00000576222 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
PCDHGB3-201ENST00000576222 ZNF292O60281 2723 aa8.47□□□□□ -1.05
PCDHGB3-201ENST00000576222 C8orf17Q9NRJ1 99 aa8.47□□□□□ -1.05
PCDHGB3-201ENST00000576222 KALRNO60229 2985 aa8.47□□□□□ -1.05
PCDHGB3-201ENST00000576222 C7orf65Q6ZTY9 151 aa8.46□□□□□ -1.05
PCDHGB3-201ENST00000576222 ITPR3Q14573 2671 aa8.46□□□□□ -1.05
PCDHGB3-201ENST00000576222 SPRR4Q96PI1 79 aa8.46□□□□□ -1.05
PCDHGB3-201ENST00000576222 FRYLO94915 3013 aa8.46□□□□□ -1.06
PCDHGB3-201ENST00000576222 ATRQ13535 2644 aa8.45□□□□□ -1.06
PCDHGB3-201ENST00000576222 KRTAP10-3P60369 221 aa8.45□□□□□ -1.06
PCDHGB3-201ENST00000576222 LY6G6CO95867 125 aa8.43□□□□□ -1.06
PCDHGB3-201ENST00000576222 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
PCDHGB3-201ENST00000576222 REV3LO60673 3130 aa8.42□□□□□ -1.06
PCDHGB3-201ENST00000576222 CDC42SE1Q9NRR8 79 aa8.42□□□□□ -1.06
PCDHGB3-201ENST00000576222 GCN1Q92616 2671 aaKnown RBP8.42□□□□□ -1.06
PCDHGB3-201ENST00000576222 LINC00313P59037 77 aa8.41□□□□□ -1.06
PCDHGB3-201ENST00000576222 IGLV8-61A0A075B6I0 122 aa8.41□□□□□ -1.06
PCDHGB3-201ENST00000576222 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.06
PCDHGB3-201ENST00000576222 A0A1B0GVX0 72 aa8.4□□□□□ -1.06
PCDHGB3-201ENST00000576222 LCA10Q71F78 164 aa8.4□□□□□ -1.06
PCDHGB3-201ENST00000576222 CASC10Q5T4H9 136 aa8.4□□□□□ -1.07
PCDHGB3-201ENST00000576222 MGAM2Q2M2H8 2515 aa8.4□□□□□ -1.07
PCDHGB3-201ENST00000576222 UQCR11O14957 56 aa8.39□□□□□ -1.07
PCDHGB3-201ENST00000576222 HECTD1Q9ULT8 2610 aa8.39□□□□□ -1.07
PCDHGB3-201ENST00000576222 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
PCDHGB3-201ENST00000576222 MDFIQ99750 246 aa8.38□□□□□ -1.07
PCDHGB3-201ENST00000576222 SPACA4Q8TDM5 124 aa8.36□□□□□ -1.07
PCDHGB3-201ENST00000576222 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
PCDHGB3-201ENST00000576222 KRTAP1-3Q8IUG1 177 aa8.36□□□□□ -1.07
PCDHGB3-201ENST00000576222 UNC79Q9P2D8 2635 aa8.36□□□□□ -1.07
PCDHGB3-201ENST00000576222 ADGRG4Q8IZF6 3080 aa8.36□□□□□ -1.07
PCDHGB3-201ENST00000576222 C1orf134Q5TEV5 83 aa8.35□□□□□ -1.07
PCDHGB3-201ENST00000576222 NBDYA0A0U1RRE5 68 aa8.35□□□□□ -1.07
PCDHGB3-201ENST00000576222 SPEGQ15772 3267 aa8.34□□□□□ -1.07
PCDHGB3-201ENST00000576222 SPTBN5Q9NRC6 3674 aaKnown RBP8.34□□□□□ -1.08
PCDHGB3-201ENST00000576222 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.08
PCDHGB3-201ENST00000576222 KRTAP10-11P60412 298 aa8.33□□□□□ -1.08
PCDHGB3-201ENST00000576222 NBEAL2Q6ZNJ1 2754 aa8.33□□□□□ -1.08
PCDHGB3-201ENST00000576222 IGLV7-46A0A075B6I9 117 aa8.33□□□□□ -1.08
PCDHGB3-201ENST00000576222 Q75L30 129 aa8.32□□□□□ -1.08
PCDHGB3-201ENST00000576222 RBM12B-AS1Q9P1G2 102 aa8.31□□□□□ -1.08
PCDHGB3-201ENST00000576222 CFAP46Q8IYW2 2715 aa8.31□□□□□ -1.08
PCDHGB3-201ENST00000576222 KRTAP24-1Q3LI83 254 aa8.31□□□□□ -1.08
PCDHGB3-201ENST00000576222 Q5VV11 94 aa8.3□□□□□ -1.08
PCDHGB3-201ENST00000576222 PRR26Q8N8Z3 221 aa8.3□□□□□ -1.08
PCDHGB3-201ENST00000576222 RTL8CO15255 209 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms