RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 GAGE2BQ13066 116 aa3.5□□□□□ -1.85
SF3B3-213ENST00000569687 GAGE2EQ4V326 116 aa3.5□□□□□ -1.85
SF3B3-213ENST00000569687 C9orf129Q5T035 196 aaKnown RBP3.5□□□□□ -1.85
SF3B3-213ENST00000569687 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.5□□□□□ -1.85
SF3B3-213ENST00000569687 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
SF3B3-213ENST00000569687 KCNQ1DNQ9H478 68 aa3.5□□□□□ -1.85
SF3B3-213ENST00000569687 GAGE2DQ9UEU5 116 aa3.5□□□□□ -1.85
SF3B3-213ENST00000569687 VPS13DQ5THJ4 4388 aa3.49□□□□□ -1.85
SF3B3-213ENST00000569687 ELOF1P60002 83 aaKnown RBP3.49□□□□□ -1.85
SF3B3-213ENST00000569687 CASC10Q5T4H9 136 aa3.49□□□□□ -1.85
SF3B3-213ENST00000569687 LOC110117498A0A087WWA1 95 aa3.48□□□□□ -1.85
SF3B3-213ENST00000569687 PDE6GP18545 87 aa3.48□□□□□ -1.85
SF3B3-213ENST00000569687 GAGE2AQ6NT46 116 aa3.48□□□□□ -1.85
SF3B3-213ENST00000569687 LOC107984640A0A0U1RRK4 108 aa3.47□□□□□ -1.85
SF3B3-213ENST00000569687 SPRR1AP35321 89 aa3.47□□□□□ -1.85
SF3B3-213ENST00000569687 CNBPP62633 177 aaKnown RBP3.47□□□□□ -1.85
SF3B3-213ENST00000569687 RBM3P98179 157 aaKnown RBP3.47□□□□□ -1.85
SF3B3-213ENST00000569687 SMCR5Q8TEV8 140 aa3.47□□□□□ -1.85
SF3B3-213ENST00000569687 C7orf33Q8WU49 177 aa3.47□□□□□ -1.85
SF3B3-213ENST00000569687 KRTAP3-1Q9BYR8 98 aa3.47□□□□□ -1.85
SF3B3-213ENST00000569687 C14orf132Q9NPU4 83 aa3.47□□□□□ -1.85
SF3B3-213ENST00000569687 STAB2Q8WWQ8 2551 aa3.46□□□□□ -1.86
SF3B3-213ENST00000569687 IGLV1-50A0A075B6I6 118 aa3.46□□□□□ -1.86
SF3B3-213ENST00000569687 NUPR2A6NF83 97 aa3.46□□□□□ -1.86
SF3B3-213ENST00000569687 KRTAP4-16G5E9R7 235 aaPredicted RBP3.46□□□□□ -1.86
SF3B3-213ENST00000569687 C14orf177Q52M58 125 aa3.46□□□□□ -1.86
SF3B3-213ENST00000569687 TTC32Q5I0X7 151 aa3.46□□□□□ -1.86
SF3B3-213ENST00000569687 Q6ZQY7 126 aa3.46□□□□□ -1.86
SF3B3-213ENST00000569687 KRTAP7-1Q8IUC3 87 aa3.46□□□□□ -1.86
SF3B3-213ENST00000569687 NKAPP1Q8N9T2 125 aa3.46□□□□□ -1.86
SF3B3-213ENST00000569687 KRTAP1-5Q9BYS1 174 aa3.46□□□□□ -1.86
SF3B3-213ENST00000569687 A0A1B0GV72 72 aa3.45□□□□□ -1.86
SF3B3-213ENST00000569687 NDUFV3P56181 108 aaKnown RBP3.45□□□□□ -1.86
SF3B3-213ENST00000569687 Q6JHZ5 121 aa3.45□□□□□ -1.86
SF3B3-213ENST00000569687 Q6ZQT0 140 aa3.45□□□□□ -1.86
SF3B3-213ENST00000569687 Q75L30 129 aa3.45□□□□□ -1.86
SF3B3-213ENST00000569687 LINC00846Q9NV44 126 aa3.45□□□□□ -1.86
SF3B3-213ENST00000569687 DHRS4-AS1Q9P1J3 65 aa3.45□□□□□ -1.86
SF3B3-213ENST00000569687 FBN3Q75N90 2809 aa3.45□□□□□ -1.86
SF3B3-213ENST00000569687 DNAH6Q9C0G6 4158 aa3.44□□□□□ -1.86
SF3B3-213ENST00000569687 TRBV7-4A0A0J9YYF1 115 aa3.44□□□□□ -1.86
SF3B3-213ENST00000569687 NBDYA0A0U1RRE5 68 aa3.44□□□□□ -1.86
SF3B3-213ENST00000569687 C16orf90A8MZG2 172 aa3.44□□□□□ -1.86
SF3B3-213ENST00000569687 UBE2DNLQ8IWF7 75 aa3.44□□□□□ -1.86
SF3B3-213ENST00000569687 DSCR8Q96T75 97 aa3.44□□□□□ -1.86
SF3B3-213ENST00000569687 LAMTOR3Q9UHA4 124 aa3.44□□□□□ -1.86
SF3B3-213ENST00000569687 A0A1B0GW54 56 aa3.43□□□□□ -1.86
SF3B3-213ENST00000569687 FAM168BA1KXE4 195 aa3.43□□□□□ -1.86
SF3B3-213ENST00000569687 LRCOL1A6NCL2 159 aa3.43□□□□□ -1.86
SF3B3-213ENST00000569687 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
SF3B3-213ENST00000569687 Q6ZRN7 208 aaPredicted RBP3.43□□□□□ -1.86
SF3B3-213ENST00000569687 Q6ZRX8 168 aa3.43□□□□□ -1.86
SF3B3-213ENST00000569687 MRPL55Q7Z7F7 128 aaKnown RBP3.43□□□□□ -1.86
SF3B3-213ENST00000569687 PKIGQ9Y2B9 76 aa3.43□□□□□ -1.86
SF3B3-213ENST00000569687 ALMS1Q8TCU4 4167 aa3.43□□□□□ -1.86
SF3B3-213ENST00000569687 KMT2AQ03164 3969 aa3.43□□□□□ -1.86
SF3B3-213ENST00000569687 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
SF3B3-213ENST00000569687 IGLV5-48A0A075B6I7 105 aa3.42□□□□□ -1.86
SF3B3-213ENST00000569687 EPM2AB3EWF7 344 aa3.42□□□□□ -1.86
SF3B3-213ENST00000569687 PSCAO43653 123 aa3.42□□□□□ -1.86
SF3B3-213ENST00000569687 LINC01547P58512 204 aaPredicted RBP3.42□□□□□ -1.86
SF3B3-213ENST00000569687 HIST1H4AP62805 103 aaKnown RBP3.42□□□□□ -1.86
SF3B3-213ENST00000569687 ATP5EP2Q5VTU8 51 aa3.42□□□□□ -1.86
SF3B3-213ENST00000569687 Q8N377 158 aa3.42□□□□□ -1.86
SF3B3-213ENST00000569687 C9orf163Q8N9P6 203 aa3.42□□□□□ -1.86
SF3B3-213ENST00000569687 ANAPC13Q9BS18 74 aa3.42□□□□□ -1.86
SF3B3-213ENST00000569687 ETDCA0A1B0GVM5 59 aa3.41□□□□□ -1.86
SF3B3-213ENST00000569687 A0A1W2PNN7 141 aa3.41□□□□□ -1.86
SF3B3-213ENST00000569687 RPL37AP8A6NKH3 93 aa3.41□□□□□ -1.86
SF3B3-213ENST00000569687 Q9BRP9 147 aa3.41□□□□□ -1.86
SF3B3-213ENST00000569687 UBL5Q9BZL1 73 aa3.41□□□□□ -1.86
SF3B3-213ENST00000569687 LINC00474Q9P2X8 69 aa3.41□□□□□ -1.86
SF3B3-213ENST00000569687 TENM2Q9NT68 2774 aa3.41□□□□□ -1.86
SF3B3-213ENST00000569687 DNAH17Q9UFH2 4485 aa3.4□□□□□ -1.86
SF3B3-213ENST00000569687 A0A096LNI7 61 aa3.4□□□□□ -1.87
SF3B3-213ENST00000569687 IGKV3D-7A0A0C4DH55 119 aa3.4□□□□□ -1.87
SF3B3-213ENST00000569687 H0Y9J4 135 aa3.4□□□□□ -1.87
SF3B3-213ENST00000569687 REG3GQ6UW15 175 aa3.4□□□□□ -1.87
SF3B3-213ENST00000569687 DNAH2Q9P225 4427 aa3.4□□□□□ -1.87
SF3B3-213ENST00000569687 FRAS1Q86XX4 4008 aa3.4□□□□□ -1.87
SF3B3-213ENST00000569687 HECTD4Q9Y4D8 3996 aa3.39□□□□□ -1.87
SF3B3-213ENST00000569687 BCE1O60756 84 aa3.39□□□□□ -1.87
SF3B3-213ENST00000569687 CXCL6P80162 114 aa3.39□□□□□ -1.87
SF3B3-213ENST00000569687 Q6ZR54 194 aa3.39□□□□□ -1.87
SF3B3-213ENST00000569687 FAM19A5Q7Z5A7 132 aaPredicted RBP3.39□□□□□ -1.87
SF3B3-213ENST00000569687 FAM236AA0A1B0GUQ0 79 aa3.38□□□□□ -1.87
SF3B3-213ENST00000569687 FAM236BA0A1B0GV22 79 aa3.38□□□□□ -1.87
SF3B3-213ENST00000569687 M0R2N4 97 aa3.38□□□□□ -1.87
SF3B3-213ENST00000569687 ERC2-IT1O76042 136 aa3.38□□□□□ -1.87
SF3B3-213ENST00000569687 Q6ZVQ6 151 aa3.38□□□□□ -1.87
SF3B3-213ENST00000569687 IGLV8-61A0A075B6I0 122 aa3.37□□□□□ -1.87
SF3B3-213ENST00000569687 A0A087WTM6 91 aa3.37□□□□□ -1.87
SF3B3-213ENST00000569687 IGKV2-24A0A0C4DH68 120 aa3.37□□□□□ -1.87
SF3B3-213ENST00000569687 ATOX1O00244 68 aa3.37□□□□□ -1.87
SF3B3-213ENST00000569687 SMIM29Q86T20 159 aa3.37□□□□□ -1.87
SF3B3-213ENST00000569687 DEFB105AQ8NG35 78 aa3.37□□□□□ -1.87
SF3B3-213ENST00000569687 HYDINQ4G0P3 5121 aa3.36□□□□□ -1.87
SF3B3-213ENST00000569687 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.36□□□□□ -1.87
SF3B3-213ENST00000569687 C3orf84H3BNL1 204 aa3.36□□□□□ -1.87
SF3B3-213ENST00000569687 CCDC179H3BU77 68 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms