RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 Q6ZRP5 223 aa11.32□□□□□ -0.6
VAC14-210ENST00000568548 RPL37AP8A6NKH3 93 aa11.31□□□□□ -0.6
VAC14-210ENST00000568548 VPREB1P12018 145 aa11.31□□□□□ -0.6
VAC14-210ENST00000568548 KRTAP10-11P60412 298 aa11.31□□□□□ -0.6
VAC14-210ENST00000568548 ESRGQ1W209 222 aa11.31□□□□□ -0.6
VAC14-210ENST00000568548 MGAM2Q2M2H8 2515 aa11.3□□□□□ -0.6
VAC14-210ENST00000568548 Q5XG85 94 aa11.29□□□□□ -0.6
VAC14-210ENST00000568548 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
VAC14-210ENST00000568548 CMYA5Q8N3K9 4069 aa11.28□□□□□ -0.6
VAC14-210ENST00000568548 PRB2P02812 416 aaPredicted RBP11.28□□□□□ -0.6
VAC14-210ENST00000568548 ELOF1P60002 83 aaKnown RBP11.28□□□□□ -0.6
VAC14-210ENST00000568548 FAM168BA1KXE4 195 aa11.26□□□□□ -0.61
VAC14-210ENST00000568548 SERTAD4-AS1Q5TG53 156 aa11.26□□□□□ -0.61
VAC14-210ENST00000568548 TRBV7-4A0A0J9YYF1 115 aa11.25□□□□□ -0.61
VAC14-210ENST00000568548 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
VAC14-210ENST00000568548 NREPQ16612 68 aa11.25□□□□□ -0.61
VAC14-210ENST00000568548 LYSTQ99698 3801 aa11.24□□□□□ -0.61
VAC14-210ENST00000568548 M0R378 163 aa11.23□□□□□ -0.61
VAC14-210ENST00000568548 CASC10Q5T4H9 136 aa11.23□□□□□ -0.61
VAC14-210ENST00000568548 COL7A1Q02388 2944 aa11.23□□□□□ -0.61
VAC14-210ENST00000568548 A0A0G2JQZ4 141 aa11.23□□□□□ -0.61
VAC14-210ENST00000568548 A0A1W2PNN7 141 aa11.23□□□□□ -0.61
VAC14-210ENST00000568548 NDUFC2-KCTD14E9PQ53 114 aa11.23□□□□□ -0.61
VAC14-210ENST00000568548 KRTAP26-1Q6PEX3 210 aa11.23□□□□□ -0.61
VAC14-210ENST00000568548 NKAPP1Q8N9T2 125 aa11.22□□□□□ -0.61
VAC14-210ENST00000568548 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
VAC14-210ENST00000568548 GVQW2A0A096LPI5 108 aaPredicted RBP11.22□□□□□ -0.61
VAC14-210ENST00000568548 EGFEM1PQ0D2K5 195 aa11.22□□□□□ -0.61
VAC14-210ENST00000568548 STAB2Q8WWQ8 2551 aa11.22□□□□□ -0.61
VAC14-210ENST00000568548 PDE6GP18545 87 aa11.22□□□□□ -0.61
VAC14-210ENST00000568548 CXCL6P80162 114 aa11.21□□□□□ -0.61
VAC14-210ENST00000568548 LINC00528Q8N1L1 170 aa11.21□□□□□ -0.62
VAC14-210ENST00000568548 ST20-AS1Q8NBB2 130 aa11.19□□□□□ -0.62
VAC14-210ENST00000568548 SYCNQ0VAF6 134 aa11.18□□□□□ -0.62
VAC14-210ENST00000568548 C7orf33Q8WU49 177 aa11.18□□□□□ -0.62
VAC14-210ENST00000568548 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
VAC14-210ENST00000568548 MPLKIPQ8TAP9 179 aa11.17□□□□□ -0.62
VAC14-210ENST00000568548 FAM30AQ9NZY2 134 aa11.17□□□□□ -0.62
VAC14-210ENST00000568548 TMEM254Q8TBM7 123 aa11.16□□□□□ -0.62
VAC14-210ENST00000568548 DNAH10Q8IVF4 4471 aa11.16□□□□□ -0.62
VAC14-210ENST00000568548 KLKP1Q107X0 134 aa11.16□□□□□ -0.62
VAC14-210ENST00000568548 SERP1Q9Y6X1 66 aa11.15□□□□□ -0.62
VAC14-210ENST00000568548 Q8N377 158 aa11.15□□□□□ -0.63
VAC14-210ENST00000568548 HIGD2AQ9BW72 106 aa11.15□□□□□ -0.63
VAC14-210ENST00000568548 LRCOL1A6NCL2 159 aa11.14□□□□□ -0.63
VAC14-210ENST00000568548 MRAPQ8TCY5 172 aa11.14□□□□□ -0.63
VAC14-210ENST00000568548 IGKV4-1P06312 121 aa11.14□□□□□ -0.63
VAC14-210ENST00000568548 DNAH3Q8TD57 4116 aa11.12□□□□□ -0.63
VAC14-210ENST00000568548 DEFB116Q30KQ4 102 aa11.12□□□□□ -0.63
VAC14-210ENST00000568548 LINC00336Q6ZUF6 198 aa11.12□□□□□ -0.63
VAC14-210ENST00000568548 TRBV7-6A0A0J9YX20 115 aa11.12□□□□□ -0.63
VAC14-210ENST00000568548 C11orf45Q8TAV5 145 aa11.11□□□□□ -0.63
VAC14-210ENST00000568548 ERC2-IT1O76042 136 aa11.1□□□□□ -0.63
VAC14-210ENST00000568548 FP248Q71RG6 208 aaPredicted RBP11.1□□□□□ -0.63
VAC14-210ENST00000568548 SMIM29Q86T20 159 aa11.09□□□□□ -0.63
VAC14-210ENST00000568548 PRR4Q16378 134 aa11.09□□□□□ -0.63
VAC14-210ENST00000568548 FAM229BQ4G0N7 80 aa11.09□□□□□ -0.63
VAC14-210ENST00000568548 Q9BRP9 147 aa11.09□□□□□ -0.63
VAC14-210ENST00000568548 ETDCA0A1B0GVM5 59 aa11.08□□□□□ -0.64
VAC14-210ENST00000568548 UBE2BP63146 152 aa11.08□□□□□ -0.64
VAC14-210ENST00000568548 BCE1O60756 84 aa11.07□□□□□ -0.64
VAC14-210ENST00000568548 H3BQ85 93 aa11.07□□□□□ -0.64
VAC14-210ENST00000568548 FUSP35637 526 aaKnown RBP eCLIP11.05□□□□□ -0.64
VAC14-210ENST00000568548 C1orf137Q5JT78 98 aa11.05□□□□□ -0.64
VAC14-210ENST00000568548 A0A1W2PNM2 257 aa11.05□□□□□ -0.64
VAC14-210ENST00000568548 KRTAP7-1Q8IUC3 87 aa11.05□□□□□ -0.64
VAC14-210ENST00000568548 IGKV2-24A0A0C4DH68 120 aa11.04□□□□□ -0.64
VAC14-210ENST00000568548 LINC01556Q5JQF7 62 aa11.04□□□□□ -0.64
VAC14-210ENST00000568548 H3BNG1 76 aa11.03□□□□□ -0.64
VAC14-210ENST00000568548 PRYO14603 147 aa11.03□□□□□ -0.64
VAC14-210ENST00000568548 KCNQ1DNQ9H478 68 aa11.03□□□□□ -0.64
VAC14-210ENST00000568548 PKIGQ9Y2B9 76 aa11.03□□□□□ -0.64
VAC14-210ENST00000568548 SMIM26A0A096LP01 95 aa11.02□□□□□ -0.65
VAC14-210ENST00000568548 A0A0U1RQV1 116 aa11.02□□□□□ -0.65
VAC14-210ENST00000568548 BRK1Q8WUW1 75 aa11.02□□□□□ -0.65
VAC14-210ENST00000568548 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
VAC14-210ENST00000568548 OCR1Q9BZK8 76 aa11.02□□□□□ -0.65
VAC14-210ENST00000568548 LINC00588Q9Y4M8 146 aa11.01□□□□□ -0.65
VAC14-210ENST00000568548 Q6ZRX8 168 aa11□□□□□ -0.65
VAC14-210ENST00000568548 K7EQZ3 153 aa10.98□□□□□ -0.65
VAC14-210ENST00000568548 K7EIL1 84 aa10.97□□□□□ -0.65
VAC14-210ENST00000568548 PRLHP81277 87 aa10.97□□□□□ -0.65
VAC14-210ENST00000568548 IGLV1-50A0A075B6I6 118 aa10.96□□□□□ -0.65
VAC14-210ENST00000568548 NDUFC1O43677 76 aa10.96□□□□□ -0.65
VAC14-210ENST00000568548 WFDC13Q8IUB5 93 aa10.96□□□□□ -0.66
VAC14-210ENST00000568548 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.94□□□□□ -0.66
VAC14-210ENST00000568548 A0A096LNI7 61 aa10.94□□□□□ -0.66
VAC14-210ENST00000568548 IGLV5-48A0A075B6I7 105 aa10.93□□□□□ -0.66
VAC14-210ENST00000568548 MRPL55Q7Z7F7 128 aaKnown RBP10.93□□□□□ -0.66
VAC14-210ENST00000568548 DHRS4-AS1Q9P1J3 65 aa10.93□□□□□ -0.66
VAC14-210ENST00000568548 KRTAP4-16G5E9R7 235 aaPredicted RBP10.91□□□□□ -0.66
VAC14-210ENST00000568548 DNAH10OSP0CZ25 163 aa10.91□□□□□ -0.66
VAC14-210ENST00000568548 RPL37AP61513 92 aaKnown RBP10.91□□□□□ -0.66
VAC14-210ENST00000568548 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
VAC14-210ENST00000568548 Q8NBF4 154 aa10.91□□□□□ -0.66
VAC14-210ENST00000568548 DSCR10P59022 87 aa10.9□□□□□ -0.66
VAC14-210ENST00000568548 DNAH9Q9NYC9 4486 aa10.9□□□□□ -0.66
VAC14-210ENST00000568548 LINC00476Q8WZB0 136 aa10.88□□□□□ -0.67
VAC14-210ENST00000568548 DNAH1Q9P2D7 4330 aa10.88□□□□□ -0.67
VAC14-210ENST00000568548 CHTF8P0CG12 524 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms