RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 Q8NAQ8 132 aa10.38□□□□□ -0.75
COMMD4-215ENST00000566843 OCR1Q9BZK8 76 aa10.38□□□□□ -0.75
COMMD4-215ENST00000566843 EGFEM1PQ0D2K5 195 aa10.37□□□□□ -0.75
COMMD4-215ENST00000566843 A0A0U1RQV1 116 aa10.37□□□□□ -0.75
COMMD4-215ENST00000566843 APOC4P55056 127 aa10.36□□□□□ -0.75
COMMD4-215ENST00000566843 LINC00474Q9P2X8 69 aa10.36□□□□□ -0.75
COMMD4-215ENST00000566843 CAMK2N2Q96S95 79 aa10.35□□□□□ -0.75
COMMD4-215ENST00000566843 SPART-AS1P0CW21 52 aa10.35□□□□□ -0.75
COMMD4-215ENST00000566843 KRTAP26-1Q6PEX3 210 aa10.35□□□□□ -0.75
COMMD4-215ENST00000566843 Q8N9L7 120 aa10.35□□□□□ -0.75
COMMD4-215ENST00000566843 PRYO14603 147 aa10.33□□□□□ -0.76
COMMD4-215ENST00000566843 TENM1Q9UKZ4 2725 aa10.32□□□□□ -0.76
COMMD4-215ENST00000566843 HTN3P15516 51 aa10.32□□□□□ -0.76
COMMD4-215ENST00000566843 HIGD2BQ4VC39 106 aa10.32□□□□□ -0.76
COMMD4-215ENST00000566843 ATRQ13535 2644 aa10.32□□□□□ -0.76
COMMD4-215ENST00000566843 Q6ZRU5 148 aa10.32□□□□□ -0.76
COMMD4-215ENST00000566843 KRTAP24-1Q3LI83 254 aa10.31□□□□□ -0.76
COMMD4-215ENST00000566843 BRK1Q8WUW1 75 aa10.31□□□□□ -0.76
COMMD4-215ENST00000566843 Q6ZTC4 211 aa10.29□□□□□ -0.76
COMMD4-215ENST00000566843 C15orf56Q8N910 161 aa10.29□□□□□ -0.76
COMMD4-215ENST00000566843 FBN1P35555 2871 aaKnown RBP10.29□□□□□ -0.76
COMMD4-215ENST00000566843 NBEAL2Q6ZNJ1 2754 aa10.28□□□□□ -0.76
COMMD4-215ENST00000566843 IGLV5-48A0A075B6I7 105 aa10.28□□□□□ -0.76
COMMD4-215ENST00000566843 FUSP35637 526 aaKnown RBP eCLIP10.28□□□□□ -0.76
COMMD4-215ENST00000566843 FAM229BQ4G0N7 80 aa10.28□□□□□ -0.76
COMMD4-215ENST00000566843 A0A1B0GW54 56 aa10.27□□□□□ -0.76
COMMD4-215ENST00000566843 Q8N377 158 aa10.27□□□□□ -0.77
COMMD4-215ENST00000566843 KCNQ1DNQ9H478 68 aa10.27□□□□□ -0.77
COMMD4-215ENST00000566843 C3orf84H3BNL1 204 aa10.26□□□□□ -0.77
COMMD4-215ENST00000566843 LCE6AA0A183 80 aa10.25□□□□□ -0.77
COMMD4-215ENST00000566843 Q6ZRP5 223 aa10.25□□□□□ -0.77
COMMD4-215ENST00000566843 WFDC10BQ8IUB3 73 aa10.25□□□□□ -0.77
COMMD4-215ENST00000566843 ESRGQ1W209 222 aa10.24□□□□□ -0.77
COMMD4-215ENST00000566843 HIGD2AQ9BW72 106 aa10.24□□□□□ -0.77
COMMD4-215ENST00000566843 TRRAPQ9Y4A5 3859 aa10.24□□□□□ -0.77
COMMD4-215ENST00000566843 KPRPQ5T749 579 aaPredicted RBP10.24□□□□□ -0.77
COMMD4-215ENST00000566843 VWFP04275 2813 aa10.23□□□□□ -0.77
COMMD4-215ENST00000566843 H3BNG1 76 aa10.22□□□□□ -0.77
COMMD4-215ENST00000566843 A0A1W2PNM2 257 aa10.2□□□□□ -0.78
COMMD4-215ENST00000566843 SMIM29Q86T20 159 aa10.2□□□□□ -0.78
COMMD4-215ENST00000566843 DEFB105AQ8NG35 78 aa10.2□□□□□ -0.78
COMMD4-215ENST00000566843 C7orf33Q8WU49 177 aa10.2□□□□□ -0.78
COMMD4-215ENST00000566843 TNP2Q05952 138 aa10.19□□□□□ -0.78
COMMD4-215ENST00000566843 DHRS4-AS1Q9P1J3 65 aa10.19□□□□□ -0.78
COMMD4-215ENST00000566843 NKAPP1Q8N9T2 125 aa10.18□□□□□ -0.78
COMMD4-215ENST00000566843 MPLKIPQ8TAP9 179 aa10.18□□□□□ -0.78
COMMD4-215ENST00000566843 SYCNQ0VAF6 134 aa10.18□□□□□ -0.78
COMMD4-215ENST00000566843 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
COMMD4-215ENST00000566843 FAM30AQ9NZY2 134 aa10.18□□□□□ -0.78
COMMD4-215ENST00000566843 PLA2G2DQ9UNK4 145 aa10.17□□□□□ -0.78
COMMD4-215ENST00000566843 STAB1Q9NY15 2570 aa10.16□□□□□ -0.78
COMMD4-215ENST00000566843 KRTAP4-16G5E9R7 235 aaPredicted RBP10.16□□□□□ -0.78
COMMD4-215ENST00000566843 ZCCHC13Q8WW36 166 aaKnown RBP10.16□□□□□ -0.78
COMMD4-215ENST00000566843 hDV103S1A0JD37 113 aa10.16□□□□□ -0.78
COMMD4-215ENST00000566843 Q6ZRX8 168 aa10.16□□□□□ -0.78
COMMD4-215ENST00000566843 Q8NBF4 154 aa10.16□□□□□ -0.78
COMMD4-215ENST00000566843 SPRR4Q96PI1 79 aa10.15□□□□□ -0.78
COMMD4-215ENST00000566843 COL6A5A8TX70 2615 aa10.15□□□□□ -0.79
COMMD4-215ENST00000566843 C1orf137Q5JT78 98 aa10.14□□□□□ -0.79
COMMD4-215ENST00000566843 Q9BRP9 147 aa10.14□□□□□ -0.79
COMMD4-215ENST00000566843 TLX1NBP0CAT3 122 aa10.13□□□□□ -0.79
COMMD4-215ENST00000566843 SPRR1AP35321 89 aa10.13□□□□□ -0.79
COMMD4-215ENST00000566843 DSCR10P59022 87 aa10.13□□□□□ -0.79
COMMD4-215ENST00000566843 PMAIP1Q13794 54 aa10.13□□□□□ -0.79
COMMD4-215ENST00000566843 IGLV5-37A0A075B6J1 123 aa10.12□□□□□ -0.79
COMMD4-215ENST00000566843 LINC01556Q5JQF7 62 aa10.12□□□□□ -0.79
COMMD4-215ENST00000566843 ETDCA0A1B0GVM5 59 aa10.11□□□□□ -0.79
COMMD4-215ENST00000566843 IGKV2D-24A0A075B6R9 120 aa10.1□□□□□ -0.79
COMMD4-215ENST00000566843 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
COMMD4-215ENST00000566843 PRR15Q8IV56 129 aa10.1□□□□□ -0.79
COMMD4-215ENST00000566843 Q1T7F1 81 aa10.08□□□□□ -0.8
COMMD4-215ENST00000566843 ST20-AS1Q8NBB2 130 aa10.08□□□□□ -0.8
COMMD4-215ENST00000566843 C1orf64Q8NEQ6 169 aa10.07□□□□□ -0.8
COMMD4-215ENST00000566843 K7EQZ3 153 aa10.07□□□□□ -0.8
COMMD4-215ENST00000566843 OXLD1Q5BKU9 147 aa10.07□□□□□ -0.8
COMMD4-215ENST00000566843 RPL37AP8A6NKH3 93 aa10.06□□□□□ -0.8
COMMD4-215ENST00000566843 CYP4F30PQ9H0H9 118 aa10.06□□□□□ -0.8
COMMD4-215ENST00000566843 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.05□□□□□ -0.8
COMMD4-215ENST00000566843 MDFIQ99750 246 aa10.05□□□□□ -0.8
COMMD4-215ENST00000566843 CD164Q04900 197 aa10.04□□□□□ -0.8
COMMD4-215ENST00000566843 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
COMMD4-215ENST00000566843 FAM168BA1KXE4 195 aa10.03□□□□□ -0.8
COMMD4-215ENST00000566843 HCG22E2RYF7 251 aa10.03□□□□□ -0.8
COMMD4-215ENST00000566843 RETNQ9HD89 108 aa10.03□□□□□ -0.8
COMMD4-215ENST00000566843 PKD1L1Q8TDX9 2849 aa10.02□□□□□ -0.81
COMMD4-215ENST00000566843 CMYA5Q8N3K9 4069 aa10.01□□□□□ -0.81
COMMD4-215ENST00000566843 DNAH10OSP0CZ25 163 aa10□□□□□ -0.81
COMMD4-215ENST00000566843 KRTAP10-11P60412 298 aa9.99□□□□□ -0.81
COMMD4-215ENST00000566843 ANK2Q01484 3957 aa9.99□□□□□ -0.81
COMMD4-215ENST00000566843 LRCOL1A6NCL2 159 aa9.98□□□□□ -0.81
COMMD4-215ENST00000566843 LINC00476Q8WZB0 136 aa9.98□□□□□ -0.81
COMMD4-215ENST00000566843 PSCAO43653 123 aa9.98□□□□□ -0.81
COMMD4-215ENST00000566843 MRPL55Q7Z7F7 128 aaKnown RBP9.98□□□□□ -0.81
COMMD4-215ENST00000566843 UBE2BP63146 152 aa9.96□□□□□ -0.81
COMMD4-215ENST00000566843 NDUFB1O75438 58 aa9.96□□□□□ -0.82
COMMD4-215ENST00000566843 DEFB131BA0A096LNP1 70 aa9.95□□□□□ -0.82
COMMD4-215ENST00000566843 REG3GQ6UW15 175 aa9.94□□□□□ -0.82
COMMD4-215ENST00000566843 IGFL1Q6UW32 110 aa9.94□□□□□ -0.82
COMMD4-215ENST00000566843 IGLV8-61A0A075B6I0 122 aa9.93□□□□□ -0.82
COMMD4-215ENST00000566843 TRAV22A0A0B4J277 110 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms