RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 C1orf137Q5JT78 98 aa7.09□□□□□ -1.27
KARS-207ENST00000566560 UQCR10Q9UDW1 63 aa7.09□□□□□ -1.27
KARS-207ENST00000566560 IGLV1-50A0A075B6I6 118 aa7.08□□□□□ -1.28
KARS-207ENST00000566560 TRBV10-3A0A0K0K1G6 114 aa7.08□□□□□ -1.28
KARS-207ENST00000566560 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
KARS-207ENST00000566560 S100A7L2Q5SY68 101 aa7.08□□□□□ -1.28
KARS-207ENST00000566560 HERC2O95714 4834 aa7.08□□□□□ -1.28
KARS-207ENST00000566560 DDTP30046 118 aa7.07□□□□□ -1.28
KARS-207ENST00000566560 C12orf57Q99622 126 aa7.07□□□□□ -1.28
KARS-207ENST00000566560 PRYO14603 147 aa7.06□□□□□ -1.28
KARS-207ENST00000566560 REG3GQ6UW15 175 aa7.06□□□□□ -1.28
KARS-207ENST00000566560 LINC00518Q8N0U6 118 aa7.06□□□□□ -1.28
KARS-207ENST00000566560 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
KARS-207ENST00000566560 PRO1933Q9H354 126 aa7.06□□□□□ -1.28
KARS-207ENST00000566560 VPS13BQ7Z7G8 4022 aa7.05□□□□□ -1.28
KARS-207ENST00000566560 A4D1N5 150 aa7.05□□□□□ -1.28
KARS-207ENST00000566560 BCE1O60756 84 aa7.05□□□□□ -1.28
KARS-207ENST00000566560 IGLV6-57P01721 117 aa7.05□□□□□ -1.28
KARS-207ENST00000566560 HNRNPA3P51991 378 aaKnown RBP7.05□□□□□ -1.28
KARS-207ENST00000566560 LINC00337Q8N6G1 96 aa7.05□□□□□ -1.28
KARS-207ENST00000566560 OR13C6PQ8NH95 151 aa7.05□□□□□ -1.28
KARS-207ENST00000566560 TMEM126AQ9H061 195 aa7.05□□□□□ -1.28
KARS-207ENST00000566560 TRAV23DV6A0A075B6W5 121 aa7.04□□□□□ -1.28
KARS-207ENST00000566560 IGLV7-43P04211 117 aa7.04□□□□□ -1.28
KARS-207ENST00000566560 TAL2Q16559 108 aa7.04□□□□□ -1.28
KARS-207ENST00000566560 HSD52Q0P140 79 aa7.03□□□□□ -1.28
KARS-207ENST00000566560 KCNQ1DNQ9H478 68 aa7.03□□□□□ -1.28
KARS-207ENST00000566560 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.29
KARS-207ENST00000566560 A6NDN8 102 aa7.02□□□□□ -1.29
KARS-207ENST00000566560 TSTD3H0UI37 97 aa7.02□□□□□ -1.29
KARS-207ENST00000566560 UBE2AP49459 152 aa7.02□□□□□ -1.29
KARS-207ENST00000566560 PRLHP81277 87 aa7.02□□□□□ -1.29
KARS-207ENST00000566560 FAM19A1Q7Z5A9 133 aa7.02□□□□□ -1.29
KARS-207ENST00000566560 CEND1Q8N111 149 aa7.02□□□□□ -1.29
KARS-207ENST00000566560 CBY1Q9Y3M2 126 aa7.02□□□□□ -1.29
KARS-207ENST00000566560 SPRR1AP35321 89 aa7.01□□□□□ -1.29
KARS-207ENST00000566560 RPL28P46779 137 aaKnown RBP7.01□□□□□ -1.29
KARS-207ENST00000566560 FLG2Q5D862 2391 aaPredicted RBP7.01□□□□□ -1.29
KARS-207ENST00000566560 SRRM2Q9UQ35 2752 aaKnown RBP7□□□□□ -1.29
KARS-207ENST00000566560 ETDCA0A1B0GVM5 59 aa7□□□□□ -1.29
KARS-207ENST00000566560 ZNF73O43830 326 aaPredicted RBP7□□□□□ -1.29
KARS-207ENST00000566560 INAFM2P0DMQ5 153 aa7□□□□□ -1.29
KARS-207ENST00000566560 FXYD2P54710 66 aa7□□□□□ -1.29
KARS-207ENST00000566560 ZNF861PO60384 105 aa6.99□□□□□ -1.29
KARS-207ENST00000566560 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
KARS-207ENST00000566560 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
KARS-207ENST00000566560 KRTAP13-1Q8IUC0 172 aa6.99□□□□□ -1.29
KARS-207ENST00000566560 DIRC1Q969H9 104 aa6.99□□□□□ -1.29
KARS-207ENST00000566560 A0A0B4J2C4 111 aa6.98□□□□□ -1.29
KARS-207ENST00000566560 KRTAP4-16G5E9R7 235 aaPredicted RBP6.98□□□□□ -1.29
KARS-207ENST00000566560 RAB37Q96AX2 223 aa6.98□□□□□ -1.29
KARS-207ENST00000566560 H0Y9J4 135 aa6.96□□□□□ -1.3
KARS-207ENST00000566560 CFC1BP0CG36 223 aa6.96□□□□□ -1.3
KARS-207ENST00000566560 CFC1P0CG37 223 aa6.96□□□□□ -1.3
KARS-207ENST00000566560 HINT1P49773 126 aaPredicted RBP6.96□□□□□ -1.3
KARS-207ENST00000566560 C6orf99Q4VX62 202 aa6.96□□□□□ -1.3
KARS-207ENST00000566560 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
KARS-207ENST00000566560 Q6ZRX8 168 aa6.96□□□□□ -1.3
KARS-207ENST00000566560 HIGD2AQ9BW72 106 aa6.96□□□□□ -1.3
KARS-207ENST00000566560 PKHD1L1Q86WI1 4243 aa6.96□□□□□ -1.3
KARS-207ENST00000566560 CTAG1AP78358 180 aa6.95□□□□□ -1.3
KARS-207ENST00000566560 SMIM11BQ8TCY0 68 aa6.95□□□□□ -1.3
KARS-207ENST00000566560 NHP2Q9NX24 153 aaKnown RBP6.95□□□□□ -1.3
KARS-207ENST00000566560 H7C2G1 150 aa6.94□□□□□ -1.3
KARS-207ENST00000566560 M0R143 59 aa6.94□□□□□ -1.3
KARS-207ENST00000566560 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
KARS-207ENST00000566560 K7ERJ3 54 aa6.93□□□□□ -1.3
KARS-207ENST00000566560 COX7BP24311 80 aa6.93□□□□□ -1.3
KARS-207ENST00000566560 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
KARS-207ENST00000566560 Q1RN00 199 aa6.93□□□□□ -1.3
KARS-207ENST00000566560 BVES-AS1Q5T3Y7 98 aa6.93□□□□□ -1.3
KARS-207ENST00000566560 SMCR5Q8TEV8 140 aa6.92□□□□□ -1.3
KARS-207ENST00000566560 Q9BRP9 147 aa6.92□□□□□ -1.3
KARS-207ENST00000566560 PRO1854Q9UHT4 67 aa6.92□□□□□ -1.3
KARS-207ENST00000566560 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
KARS-207ENST00000566560 TRBV7-6A0A0J9YX20 115 aa6.91□□□□□ -1.3
KARS-207ENST00000566560 A0A1B0GWB2 263 aa6.91□□□□□ -1.3
KARS-207ENST00000566560 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
KARS-207ENST00000566560 DHRS4-AS1Q9P1J3 65 aa6.89□□□□□ -1.31
KARS-207ENST00000566560 ZNF706Q9Y5V0 76 aaPredicted RBP6.89□□□□□ -1.31
KARS-207ENST00000566560 ERC2-IT1O76042 136 aa6.88□□□□□ -1.31
KARS-207ENST00000566560 KRTAP1-4P0C5Y4 121 aa6.88□□□□□ -1.31
KARS-207ENST00000566560 VAMP3Q15836 100 aa6.88□□□□□ -1.31
KARS-207ENST00000566560 BATFQ16520 125 aa6.87□□□□□ -1.31
KARS-207ENST00000566560 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
KARS-207ENST00000566560 TRIAP1O43715 76 aa6.86□□□□□ -1.31
KARS-207ENST00000566560 TSPAN13O95857 204 aa6.86□□□□□ -1.31
KARS-207ENST00000566560 OXTP01178 125 aa6.86□□□□□ -1.31
KARS-207ENST00000566560 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
KARS-207ENST00000566560 MYCBP2O75592 4640 aa6.86□□□□□ -1.31
KARS-207ENST00000566560 KRTAP29-1A8MX34 341 aaPredicted RBP6.85□□□□□ -1.31
KARS-207ENST00000566560 SLC25A20O43772 301 aa6.85□□□□□ -1.31
KARS-207ENST00000566560 LINC01600Q96MT4 127 aa6.85□□□□□ -1.31
KARS-207ENST00000566560 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
KARS-207ENST00000566560 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.31
KARS-207ENST00000566560 PSMB2P49721 201 aa6.84□□□□□ -1.31
KARS-207ENST00000566560 GAGE2AQ6NT46 116 aa6.84□□□□□ -1.31
KARS-207ENST00000566560 LINC00575Q6W349 94 aa6.84□□□□□ -1.31
KARS-207ENST00000566560 ST20-AS1Q8NBB2 130 aa6.84□□□□□ -1.31
KARS-207ENST00000566560 ANAPC11Q9NYG5 84 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms