RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 MIEN1Q9BRT3 115 aa8.37□□□□□ -1.07
FANCA-220ENST00000566409 GAGE2AQ6NT46 116 aa8.36□□□□□ -1.07
FANCA-220ENST00000566409 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
FANCA-220ENST00000566409 Q6ZRX8 168 aa8.36□□□□□ -1.07
FANCA-220ENST00000566409 Q8NBF4 154 aa8.36□□□□□ -1.07
FANCA-220ENST00000566409 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
FANCA-220ENST00000566409 S100A12P80511 92 aa8.35□□□□□ -1.07
FANCA-220ENST00000566409 S100A7L2Q5SY68 101 aa8.35□□□□□ -1.07
FANCA-220ENST00000566409 PET117Q6UWS5 81 aa8.35□□□□□ -1.07
FANCA-220ENST00000566409 C3orf79P0CE67 100 aa8.34□□□□□ -1.07
FANCA-220ENST00000566409 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
FANCA-220ENST00000566409 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
FANCA-220ENST00000566409 TRAV23DV6A0A075B6W5 121 aa8.33□□□□□ -1.08
FANCA-220ENST00000566409 COA6Q5JTJ3 125 aaKnown RBP8.33□□□□□ -1.08
FANCA-220ENST00000566409 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
FANCA-220ENST00000566409 ZNF73O43830 326 aaPredicted RBP8.32□□□□□ -1.08
FANCA-220ENST00000566409 TIMM17BO60830 172 aa8.31□□□□□ -1.08
FANCA-220ENST00000566409 IGLV9-49A0A0B4J1Y8 123 aa8.3□□□□□ -1.08
FANCA-220ENST00000566409 MOBPQ13875 183 aa8.3□□□□□ -1.08
FANCA-220ENST00000566409 CDIP1Q9H305 208 aa8.3□□□□□ -1.08
FANCA-220ENST00000566409 ZNF815PA8K554 130 aa8.29□□□□□ -1.08
FANCA-220ENST00000566409 ST20-AS1Q8NBB2 130 aa8.29□□□□□ -1.08
FANCA-220ENST00000566409 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
FANCA-220ENST00000566409 SPINK1P00995 79 aa8.28□□□□□ -1.08
FANCA-220ENST00000566409 KRTDAPP60985 99 aa8.28□□□□□ -1.08
FANCA-220ENST00000566409 JOSD1Q15040 202 aaPredicted RBP8.27□□□□□ -1.09
FANCA-220ENST00000566409 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
FANCA-220ENST00000566409 ANKRD39Q53RE8 183 aa8.26□□□□□ -1.09
FANCA-220ENST00000566409 FP248Q71RG6 208 aaPredicted RBP8.26□□□□□ -1.09
FANCA-220ENST00000566409 OR13C6PQ8NH95 151 aa8.25□□□□□ -1.09
FANCA-220ENST00000566409 KRTAP13-3Q3SY46 172 aa8.24□□□□□ -1.09
FANCA-220ENST00000566409 Q8N377 158 aa8.24□□□□□ -1.09
FANCA-220ENST00000566409 FAT4Q6V0I7 4981 aa8.24□□□□□ -1.09
FANCA-220ENST00000566409 ATOH7Q8N100 152 aa8.23□□□□□ -1.09
FANCA-220ENST00000566409 SPANXDQ9BXN6 97 aa8.23□□□□□ -1.09
FANCA-220ENST00000566409 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
FANCA-220ENST00000566409 TMA7Q9Y2S6 64 aaKnown RBP8.22□□□□□ -1.09
FANCA-220ENST00000566409 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
FANCA-220ENST00000566409 SPRR1BP22528 89 aa8.21□□□□□ -1.1
FANCA-220ENST00000566409 HINT1P49773 126 aaPredicted RBP8.21□□□□□ -1.1
FANCA-220ENST00000566409 PCP2Q8IVA1 136 aa8.21□□□□□ -1.1
FANCA-220ENST00000566409 CBY1Q9Y3M2 126 aa8.21□□□□□ -1.1
FANCA-220ENST00000566409 C9orf153Q5TBE3 101 aa8.2□□□□□ -1.1
FANCA-220ENST00000566409 LINC00518Q8N0U6 118 aa8.2□□□□□ -1.1
FANCA-220ENST00000566409 C20orf202A1L168 122 aa8.19□□□□□ -1.1
FANCA-220ENST00000566409 ELOF1P60002 83 aaKnown RBP8.19□□□□□ -1.1
FANCA-220ENST00000566409 C6orf99Q4VX62 202 aa8.19□□□□□ -1.1
FANCA-220ENST00000566409 SCGB1D4Q6XE38 83 aa8.19□□□□□ -1.1
FANCA-220ENST00000566409 DHRS4-AS1Q9P1J3 65 aa8.19□□□□□ -1.1
FANCA-220ENST00000566409 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
FANCA-220ENST00000566409 COX7BP24311 80 aa8.18□□□□□ -1.1
FANCA-220ENST00000566409 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
FANCA-220ENST00000566409 SLC25A20O43772 301 aa8.16□□□□□ -1.1
FANCA-220ENST00000566409 IFITM1P13164 125 aa8.16□□□□□ -1.1
FANCA-220ENST00000566409 MUSTN1Q8IVN3 82 aa8.16□□□□□ -1.1
FANCA-220ENST00000566409 TRBV7-6A0A0J9YX20 115 aa8.14□□□□□ -1.11
FANCA-220ENST00000566409 Q6ZVH6 145 aa8.14□□□□□ -1.11
FANCA-220ENST00000566409 HIST3H2BBQ8N257 126 aa8.14□□□□□ -1.11
FANCA-220ENST00000566409 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
FANCA-220ENST00000566409 HIST1H2BLQ99880 126 aa8.13□□□□□ -1.11
FANCA-220ENST00000566409 KRTAP4-1Q9BYQ7 146 aa8.13□□□□□ -1.11
FANCA-220ENST00000566409 A6NDN8 102 aa8.12□□□□□ -1.11
FANCA-220ENST00000566409 DEFB105AQ8NG35 78 aa8.12□□□□□ -1.11
FANCA-220ENST00000566409 COPS9Q8WXC6 57 aa8.12□□□□□ -1.11
FANCA-220ENST00000566409 AKR1D1P51857 326 aa8.11□□□□□ -1.11
FANCA-220ENST00000566409 LINC01547P58512 204 aaPredicted RBP8.11□□□□□ -1.11
FANCA-220ENST00000566409 SLC25A34Q6PIV7 304 aa8.11□□□□□ -1.11
FANCA-220ENST00000566409 HRCT1Q6UXD1 115 aa8.11□□□□□ -1.11
FANCA-220ENST00000566409 SMIM29Q86T20 159 aa8.11□□□□□ -1.11
FANCA-220ENST00000566409 LAMTOR3Q9UHA4 124 aa8.11□□□□□ -1.11
FANCA-220ENST00000566409 A0A1B0GWB2 263 aa8.1□□□□□ -1.11
FANCA-220ENST00000566409 SNRPEP62304 92 aaKnown RBP8.1□□□□□ -1.11
FANCA-220ENST00000566409 TAL2Q16559 108 aa8.1□□□□□ -1.11
FANCA-220ENST00000566409 Q1RN00 199 aa8.1□□□□□ -1.11
FANCA-220ENST00000566409 TEX49A0A1B0GTD5 131 aa8.09□□□□□ -1.11
FANCA-220ENST00000566409 TMEM238LA0A1B0GVL6 79 aa8.09□□□□□ -1.11
FANCA-220ENST00000566409 SMIM11BQ8TCY0 68 aa8.08□□□□□ -1.12
FANCA-220ENST00000566409 IGLV5-48A0A075B6I7 105 aa8.07□□□□□ -1.12
FANCA-220ENST00000566409 S100A2P29034 98 aa8.07□□□□□ -1.12
FANCA-220ENST00000566409 XP32Q5T750 250 aa8.07□□□□□ -1.12
FANCA-220ENST00000566409 TRAV13-2A0A0B4J235 113 aa8.06□□□□□ -1.12
FANCA-220ENST00000566409 A0A0G2JQZ4 141 aa8.05□□□□□ -1.12
FANCA-220ENST00000566409 S100A1P23297 94 aa8.05□□□□□ -1.12
FANCA-220ENST00000566409 SEC61BP60468 96 aaKnown RBP8.05□□□□□ -1.12
FANCA-220ENST00000566409 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
FANCA-220ENST00000566409 CD164Q04900 197 aa8.04□□□□□ -1.12
FANCA-220ENST00000566409 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
FANCA-220ENST00000566409 A4D1N5 150 aa8.03□□□□□ -1.12
FANCA-220ENST00000566409 H7C2G1 150 aa8.02□□□□□ -1.13
FANCA-220ENST00000566409 HSBP1L1C9JCN9 74 aa8.01□□□□□ -1.13
FANCA-220ENST00000566409 GHRHP01286 108 aa8.01□□□□□ -1.13
FANCA-220ENST00000566409 S100A6P06703 90 aa8.01□□□□□ -1.13
FANCA-220ENST00000566409 Q5XG85 94 aa7.99□□□□□ -1.13
FANCA-220ENST00000566409 LINC00575Q6W349 94 aa7.99□□□□□ -1.13
FANCA-220ENST00000566409 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
FANCA-220ENST00000566409 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
FANCA-220ENST00000566409 NHP2Q9NX24 153 aaKnown RBP7.98□□□□□ -1.13
FANCA-220ENST00000566409 SCGB1D1O95968 90 aa7.97□□□□□ -1.13
FANCA-220ENST00000566409 C1orf195Q5TG92 126 aa7.97□□□□□ -1.13
FANCA-220ENST00000566409 C12orf57Q99622 126 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms