RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
ZEB1-219ENST00000560721 SETD2Q9BYW2 2564 aaPredicted RBP3.56□□□□□ -1.84
ZEB1-219ENST00000560721 CDK2AP2O75956 126 aa3.56□□□□□ -1.84
ZEB1-219ENST00000560721 NANOS2P60321 138 aaKnown RBP3.56□□□□□ -1.84
ZEB1-219ENST00000560721 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
ZEB1-219ENST00000560721 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
ZEB1-219ENST00000560721 C6orf223Q8N319 242 aa3.56□□□□□ -1.84
ZEB1-219ENST00000560721 LINC00846Q9NV44 126 aa3.56□□□□□ -1.84
ZEB1-219ENST00000560721 IGKV3D-7A0A0C4DH55 119 aa3.55□□□□□ -1.84
ZEB1-219ENST00000560721 DNAL4O96015 105 aa3.55□□□□□ -1.84
ZEB1-219ENST00000560721 RPL18AQ02543 176 aaKnown RBP3.55□□□□□ -1.84
ZEB1-219ENST00000560721 CD164Q04900 197 aa3.55□□□□□ -1.84
ZEB1-219ENST00000560721 CCKP06307 115 aa3.55□□□□□ -1.84
ZEB1-219ENST00000560721 LINC00158P58513 81 aa3.55□□□□□ -1.84
ZEB1-219ENST00000560721 JMJD7-PLA2G4BH0Y9G9 81 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 C14orf132Q9NPU4 83 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 ORMDL1Q9P0S3 153 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 STARD9Q9P2P6 4700 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 RYR2Q92736 4967 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 LECT2O14960 151 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 RPL37AP61513 92 aaKnown RBP3.54□□□□□ -1.84
ZEB1-219ENST00000560721 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 Q8N814 137 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 TMEM256-PLSCR3K7ERE1 68 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 PLAC8Q9NZF1 115 aa3.54□□□□□ -1.84
ZEB1-219ENST00000560721 KMT2AQ03164 3969 aa3.53□□□□□ -1.84
ZEB1-219ENST00000560721 C15orf56Q8N910 161 aa3.53□□□□□ -1.84
ZEB1-219ENST00000560721 M0R2N4 97 aa3.53□□□□□ -1.84
ZEB1-219ENST00000560721 SPRR1AP35321 89 aa3.53□□□□□ -1.84
ZEB1-219ENST00000560721 C20orf197Q8N268 126 aa3.53□□□□□ -1.84
ZEB1-219ENST00000560721 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
ZEB1-219ENST00000560721 C9orf163Q8N9P6 203 aa3.53□□□□□ -1.84
ZEB1-219ENST00000560721 TOMM7Q9P0U1 55 aa3.53□□□□□ -1.84
ZEB1-219ENST00000560721 DMBT1Q9UGM3 2413 aaPredicted RBP3.53□□□□□ -1.84
ZEB1-219ENST00000560721 NCR3O14931 201 aa3.52□□□□□ -1.85
ZEB1-219ENST00000560721 NIPBLQ6KC79 2804 aaeCLIP3.52□□□□□ -1.85
ZEB1-219ENST00000560721 LOC110117498A0A087WWA1 95 aa3.52□□□□□ -1.85
ZEB1-219ENST00000560721 BCE1O60756 84 aa3.52□□□□□ -1.85
ZEB1-219ENST00000560721 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
ZEB1-219ENST00000560721 PSPHP1O15172 72 aa3.51□□□□□ -1.85
ZEB1-219ENST00000560721 TMEM258P61165 79 aa3.51□□□□□ -1.85
ZEB1-219ENST00000560721 RPS29P62273 56 aaKnown RBP3.51□□□□□ -1.85
ZEB1-219ENST00000560721 PRR4Q16378 134 aa3.51□□□□□ -1.85
ZEB1-219ENST00000560721 SNURFQ9Y675 71 aa3.51□□□□□ -1.85
ZEB1-219ENST00000560721 A0A087WVE0 104 aa3.51□□□□□ -1.85
ZEB1-219ENST00000560721 A0A1B0GW54 56 aa3.51□□□□□ -1.85
ZEB1-219ENST00000560721 C16orf90A8MZG2 172 aa3.51□□□□□ -1.85
ZEB1-219ENST00000560721 Q8NDZ9 215 aa3.51□□□□□ -1.85
ZEB1-219ENST00000560721 SMIM26A0A096LP01 95 aa3.5□□□□□ -1.85
ZEB1-219ENST00000560721 IGLV6-57P01721 117 aa3.5□□□□□ -1.85
ZEB1-219ENST00000560721 SLPIP03973 132 aa3.5□□□□□ -1.85
ZEB1-219ENST00000560721 LINC00575Q6W349 94 aa3.5□□□□□ -1.85
ZEB1-219ENST00000560721 JMJD1CQ15652 2540 aa3.5□□□□□ -1.85
ZEB1-219ENST00000560721 A0A087WTM6 91 aa3.5□□□□□ -1.85
ZEB1-219ENST00000560721 RPL37AP8A6NKH3 93 aa3.5□□□□□ -1.85
ZEB1-219ENST00000560721 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
ZEB1-219ENST00000560721 Q6ZQT0 140 aa3.5□□□□□ -1.85
ZEB1-219ENST00000560721 SPRR1BP22528 89 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 XCL1P47992 114 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 SPACA4Q8TDM5 124 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 DPH3Q96FX2 82 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 IGKV3OR2-268A0A0C4DH90 116 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 RTL8CO15255 209 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 C1orf134Q5TEV5 83 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 CHCHD10Q8WYQ3 142 aaPredicted RBP3.49□□□□□ -1.85
ZEB1-219ENST00000560721 ZNF706Q9Y5V0 76 aaPredicted RBP3.49□□□□□ -1.85
ZEB1-219ENST00000560721 FBN3Q75N90 2809 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 TENM1Q9UKZ4 2725 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 NOTCH2Q04721 2471 aa3.49□□□□□ -1.85
ZEB1-219ENST00000560721 PRR3P79522 188 aaKnown RBP3.48□□□□□ -1.85
ZEB1-219ENST00000560721 KRTAP13-1Q8IUC0 172 aa3.48□□□□□ -1.85
ZEB1-219ENST00000560721 CSMD3Q7Z407 3707 aa3.48□□□□□ -1.85
ZEB1-219ENST00000560721 DEFB130BP0DP73 79 aa3.48□□□□□ -1.85
ZEB1-219ENST00000560721 DEFB130AP0DP74 79 aa3.48□□□□□ -1.85
ZEB1-219ENST00000560721 MEGF8Q7Z7M0 2845 aa3.48□□□□□ -1.85
ZEB1-219ENST00000560721 TRAV23DV6A0A075B6W5 121 aa3.48□□□□□ -1.85
ZEB1-219ENST00000560721 WFDC10BQ8IUB3 73 aa3.48□□□□□ -1.85
ZEB1-219ENST00000560721 LINC00269Q8N2A0 174 aa3.48□□□□□ -1.85
ZEB1-219ENST00000560721 RBM12B-AS1Q9P1G2 102 aa3.48□□□□□ -1.85
ZEB1-219ENST00000560721 PDE6GP18545 87 aa3.47□□□□□ -1.85
ZEB1-219ENST00000560721 C6orf99Q4VX62 202 aa3.47□□□□□ -1.85
ZEB1-219ENST00000560721 KRTAP4-16G5E9R7 235 aaPredicted RBP3.47□□□□□ -1.85
ZEB1-219ENST00000560721 CXCL6P80162 114 aa3.47□□□□□ -1.85
ZEB1-219ENST00000560721 Q5XG85 94 aa3.47□□□□□ -1.85
ZEB1-219ENST00000560721 KRTAP1-5Q9BYS1 174 aa3.47□□□□□ -1.85
ZEB1-219ENST00000560721 C8orf87E5RJ46 101 aa3.46□□□□□ -1.85
ZEB1-219ENST00000560721 LINC00483Q53H64 154 aa3.46□□□□□ -1.85
ZEB1-219ENST00000560721 UBL5Q9BZL1 73 aa3.46□□□□□ -1.85
ZEB1-219ENST00000560721 KCNQ1DNQ9H478 68 aa3.46□□□□□ -1.85
ZEB1-219ENST00000560721 FAT1Q14517 4588 aa3.46□□□□□ -1.86
ZEB1-219ENST00000560721 FAT3Q8TDW7 4589 aa3.46□□□□□ -1.86
ZEB1-219ENST00000560721 KRTAP10-4P60372 401 aaPredicted RBP3.46□□□□□ -1.86
ZEB1-219ENST00000560721 FAM229BQ4G0N7 80 aa3.46□□□□□ -1.86
ZEB1-219ENST00000560721 TRBV7-4A0A0J9YYF1 115 aa3.46□□□□□ -1.86
ZEB1-219ENST00000560721 C9orf116Q5BN46 136 aaPredicted RBP3.46□□□□□ -1.86
ZEB1-219ENST00000560721 IGLV8-61A0A075B6I0 122 aa3.45□□□□□ -1.86
ZEB1-219ENST00000560721 KLKP1Q107X0 134 aa3.45□□□□□ -1.86
ZEB1-219ENST00000560721 C10orf25Q5T742 122 aa3.45□□□□□ -1.86
ZEB1-219ENST00000560721 LINC01547P58512 204 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms