RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 F8W1H4 67 aa2.84□□□□□ -1.95
TMOD3-207ENST00000560549 SCGB1C2P0DMR2 95 aa2.84□□□□□ -1.95
TMOD3-207ENST00000560549 IFITM1P13164 125 aa2.84□□□□□ -1.95
TMOD3-207ENST00000560549 SS18Q15532 418 aa2.84□□□□□ -1.95
TMOD3-207ENST00000560549 LELP1Q5T871 98 aa2.84□□□□□ -1.95
TMOD3-207ENST00000560549 ENHOQ6UWT2 76 aa2.84□□□□□ -1.95
TMOD3-207ENST00000560549 CARD19Q96LW7 228 aa2.84□□□□□ -1.95
TMOD3-207ENST00000560549 C11orf68Q9H3H3 251 aaKnown RBP2.84□□□□□ -1.95
TMOD3-207ENST00000560549 ICOSQ9Y6W8 199 aa2.84□□□□□ -1.95
TMOD3-207ENST00000560549 HERC1Q15751 4861 aa2.84□□□□□ -1.95
TMOD3-207ENST00000560549 IGKV2-28A0A075B6P5 120 aa2.84□□□□□ -1.96
TMOD3-207ENST00000560549 TRBV30A0A0K0K1B3 111 aa2.84□□□□□ -1.96
TMOD3-207ENST00000560549 IGKV2D-28P01615 120 aa2.84□□□□□ -1.96
TMOD3-207ENST00000560549 ANGP03950 147 aaKnown RBP2.84□□□□□ -1.96
TMOD3-207ENST00000560549 CIRBPQ14011 172 aaKnown RBP2.84□□□□□ -1.96
TMOD3-207ENST00000560549 ETDBQ3ZM63 59 aa2.84□□□□□ -1.96
TMOD3-207ENST00000560549 MEIG1Q5JSS6 88 aa2.84□□□□□ -1.96
TMOD3-207ENST00000560549 MIR7-3HGQ8N6C7 128 aa2.84□□□□□ -1.96
TMOD3-207ENST00000560549 CLEC2BQ92478 149 aa2.84□□□□□ -1.96
TMOD3-207ENST00000560549 B9D2Q9BPU9 175 aa2.84□□□□□ -1.96
TMOD3-207ENST00000560549 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 A0A1B0GV72 72 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 CCL18P55774 89 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 LINC00158P58513 81 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 ESRGQ1W209 222 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 C9orf116Q5BN46 136 aaPredicted RBP2.83□□□□□ -1.96
TMOD3-207ENST00000560549 KRTAP26-1Q6PEX3 210 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 WFDC10BQ8IUB3 73 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 Q8NDZ9 215 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 LINC00526Q96FQ7 95 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 PRR34Q9NV39 138 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 KLK12Q9UKR0 248 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 CSMD3Q7Z407 3707 aa2.83□□□□□ -1.96
TMOD3-207ENST00000560549 DNAH3Q8TD57 4116 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 TRBV20-1A0A075B6N2 111 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 IBA57-AS1B1ANH7 110 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 C9JAW5 83 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 COX7A2LO14548 114 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 Q8IZM0 81 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 ANKRD29Q8N6D5 301 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 SIGMAR1Q99720 223 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 STAB2Q8WWQ8 2551 aa2.82□□□□□ -1.96
TMOD3-207ENST00000560549 KIAA1109Q2LD37 5005 aa2.81□□□□□ -1.96
TMOD3-207ENST00000560549 H3BNG1 76 aa2.81□□□□□ -1.96
TMOD3-207ENST00000560549 ATXN8Q156A1 80 aa2.81□□□□□ -1.96
TMOD3-207ENST00000560549 UNQ6190/PRO20217Q6UXQ8 127 aa2.81□□□□□ -1.96
TMOD3-207ENST00000560549 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
TMOD3-207ENST00000560549 LINC01600Q96MT4 127 aa2.81□□□□□ -1.96
TMOD3-207ENST00000560549 SND1-IT1Q9HBX3 110 aa2.81□□□□□ -1.96
TMOD3-207ENST00000560549 KLK5Q9Y337 293 aaPredicted RBP2.81□□□□□ -1.96
TMOD3-207ENST00000560549 DEFB131BA0A096LNP1 70 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 TRBV10-2A0A0K0K1G8 114 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 LST1O00453 97 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 SLC25A20O43772 301 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 LYRM7Q5U5X0 104 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 Q6ZRU5 148 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 SMIM11BQ8TCY0 68 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 UBE2WQ96B02 151 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 TM2D3Q9BRN9 247 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 C22orf24Q9Y442 160 aa2.8□□□□□ -1.96
TMOD3-207ENST00000560549 J3QR89 54 aa2.79□□□□□ -1.96
TMOD3-207ENST00000560549 RPL28P46779 137 aaKnown RBP2.79□□□□□ -1.96
TMOD3-207ENST00000560549 CKS1BP61024 79 aa2.79□□□□□ -1.96
TMOD3-207ENST00000560549 SPAG11BQ08648 103 aa2.79□□□□□ -1.96
TMOD3-207ENST00000560549 TEN1Q86WV5 123 aa2.79□□□□□ -1.96
TMOD3-207ENST00000560549 PPDPFLQ8WWR9 84 aa2.79□□□□□ -1.96
TMOD3-207ENST00000560549 LYSTQ99698 3801 aa2.79□□□□□ -1.96
TMOD3-207ENST00000560549 DNAH9Q9NYC9 4486 aa2.79□□□□□ -1.96
TMOD3-207ENST00000560549 HUWE1Q7Z6Z7 4374 aaKnown RBP2.78□□□□□ -1.96
TMOD3-207ENST00000560549 TRAV13-2A0A0B4J235 113 aa2.78□□□□□ -1.96
TMOD3-207ENST00000560549 NDUFC2-KCTD14E9PQ53 114 aa2.78□□□□□ -1.96
TMOD3-207ENST00000560549 CXCL5P42830 114 aa2.78□□□□□ -1.96
TMOD3-207ENST00000560549 PMAIP1Q13794 54 aa2.78□□□□□ -1.96
TMOD3-207ENST00000560549 COPS9Q8WXC6 57 aa2.78□□□□□ -1.96
TMOD3-207ENST00000560549 C6orf48Q9UBA6 75 aa2.78□□□□□ -1.96
TMOD3-207ENST00000560549 LINC00588Q9Y4M8 146 aa2.78□□□□□ -1.96
TMOD3-207ENST00000560549 IGLV1-50A0A075B6I6 118 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 TEX49A0A1B0GTD5 131 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 FAM168BA1KXE4 195 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 NCR3O14931 201 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 CRPP02741 224 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 COX6CP09669 75 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 LINC01556Q5JQF7 62 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 C15orf56Q8N910 161 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 OR13C6PQ8NH95 151 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 FRAS1Q86XX4 4008 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 GVQW2A0A096LPI5 108 aaPredicted RBP2.77□□□□□ -1.97
TMOD3-207ENST00000560549 TRAV10A0A0B4J240 114 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 BAALC-AS2P0C853 105 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 MP68P56378 58 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 COX17Q14061 63 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 C9orf129Q5T035 196 aaKnown RBP2.77□□□□□ -1.97
TMOD3-207ENST00000560549 SMIM20Q8N5G0 67 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 CAMK2N2Q96S95 79 aa2.77□□□□□ -1.97
TMOD3-207ENST00000560549 H3BT86 120 aa2.76□□□□□ -1.97
TMOD3-207ENST00000560549 NDUFC2O95298 119 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms