RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 C9orf129Q5T035 196 aaKnown RBP6.37□□□□□ -1.39
RTF1-206ENST00000560447 STAB1Q9NY15 2570 aa6.37□□□□□ -1.39
RTF1-206ENST00000560447 Q6ZRP5 223 aa6.36□□□□□ -1.39
RTF1-206ENST00000560447 KCNQ1DNQ9H478 68 aa6.36□□□□□ -1.39
RTF1-206ENST00000560447 DNAH1Q9P2D7 4330 aa6.36□□□□□ -1.39
RTF1-206ENST00000560447 USP17L23D6RBM5 183 aa6.35□□□□□ -1.39
RTF1-206ENST00000560447 NHLRC4P0CG21 123 aaPredicted RBP6.35□□□□□ -1.39
RTF1-206ENST00000560447 Q6ZQY7 126 aa6.35□□□□□ -1.39
RTF1-206ENST00000560447 NKAPP1Q8N9T2 125 aa6.35□□□□□ -1.39
RTF1-206ENST00000560447 PKD1L1Q8TDX9 2849 aa6.35□□□□□ -1.39
RTF1-206ENST00000560447 PRYO14603 147 aa6.34□□□□□ -1.39
RTF1-206ENST00000560447 Q6ZQT0 140 aa6.34□□□□□ -1.39
RTF1-206ENST00000560447 LINC00846Q9NV44 126 aa6.34□□□□□ -1.39
RTF1-206ENST00000560447 LAMTOR3Q9UHA4 124 aa6.34□□□□□ -1.39
RTF1-206ENST00000560447 TENM3Q9P273 2699 aa6.33□□□□□ -1.4
RTF1-206ENST00000560447 FLNBO75369 2602 aaKnown RBP6.33□□□□□ -1.4
RTF1-206ENST00000560447 LOC107984640A0A0U1RRK4 108 aa6.33□□□□□ -1.4
RTF1-206ENST00000560447 DSCR8Q96T75 97 aa6.33□□□□□ -1.4
RTF1-206ENST00000560447 B9D2Q9BPU9 175 aa6.33□□□□□ -1.4
RTF1-206ENST00000560447 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
RTF1-206ENST00000560447 UBL5Q9BZL1 73 aa6.33□□□□□ -1.4
RTF1-206ENST00000560447 PKIGQ9Y2B9 76 aa6.33□□□□□ -1.4
RTF1-206ENST00000560447 DYNC2H1Q8NCM8 4307 aaKnown RBP6.33□□□□□ -1.4
RTF1-206ENST00000560447 HIST1H4AP62805 103 aaKnown RBP6.32□□□□□ -1.4
RTF1-206ENST00000560447 TRBV7-4A0A0J9YYF1 115 aa6.31□□□□□ -1.4
RTF1-206ENST00000560447 FAM236AA0A1B0GUQ0 79 aa6.31□□□□□ -1.4
RTF1-206ENST00000560447 FAM236BA0A1B0GV22 79 aa6.31□□□□□ -1.4
RTF1-206ENST00000560447 ATOX1O00244 68 aa6.31□□□□□ -1.4
RTF1-206ENST00000560447 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
RTF1-206ENST00000560447 DHRS4-AS1Q9P1J3 65 aa6.31□□□□□ -1.4
RTF1-206ENST00000560447 A0A1B0GW54 56 aa6.3□□□□□ -1.4
RTF1-206ENST00000560447 SPRR1AP35321 89 aa6.3□□□□□ -1.4
RTF1-206ENST00000560447 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
RTF1-206ENST00000560447 C7orf33Q8WU49 177 aa6.3□□□□□ -1.4
RTF1-206ENST00000560447 DNAH9Q9NYC9 4486 aa6.3□□□□□ -1.4
RTF1-206ENST00000560447 PRB2P02812 416 aaPredicted RBP6.29□□□□□ -1.4
RTF1-206ENST00000560447 APLNQ9ULZ1 77 aa6.29□□□□□ -1.4
RTF1-206ENST00000560447 IGLV1-50A0A075B6I6 118 aa6.28□□□□□ -1.4
RTF1-206ENST00000560447 BCE1O60756 84 aa6.28□□□□□ -1.4
RTF1-206ENST00000560447 SERTAD4-AS1Q5TG53 156 aa6.28□□□□□ -1.4
RTF1-206ENST00000560447 KRTAP4-16G5E9R7 235 aaPredicted RBP6.27□□□□□ -1.41
RTF1-206ENST00000560447 Q6ZRX8 168 aa6.27□□□□□ -1.41
RTF1-206ENST00000560447 COL6A5A8TX70 2615 aa6.27□□□□□ -1.41
RTF1-206ENST00000560447 NUPR2A6NF83 97 aa6.26□□□□□ -1.41
RTF1-206ENST00000560447 UQCRQO14949 82 aa6.26□□□□□ -1.41
RTF1-206ENST00000560447 CXCL6P80162 114 aa6.26□□□□□ -1.41
RTF1-206ENST00000560447 UBE2DNLQ8IWF7 75 aa6.26□□□□□ -1.41
RTF1-206ENST00000560447 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
RTF1-206ENST00000560447 IGKV3D-7A0A0C4DH55 119 aa6.25□□□□□ -1.41
RTF1-206ENST00000560447 ETDCA0A1B0GVM5 59 aa6.25□□□□□ -1.41
RTF1-206ENST00000560447 B5MCH6 92 aa6.25□□□□□ -1.41
RTF1-206ENST00000560447 CASC10Q5T4H9 136 aa6.25□□□□□ -1.41
RTF1-206ENST00000560447 MRPL55Q7Z7F7 128 aaKnown RBP6.25□□□□□ -1.41
RTF1-206ENST00000560447 IGLV5-48A0A075B6I7 105 aa6.24□□□□□ -1.41
RTF1-206ENST00000560447 C16orf90A8MZG2 172 aa6.24□□□□□ -1.41
RTF1-206ENST00000560447 C3orf22Q8N5N4 141 aa6.24□□□□□ -1.41
RTF1-206ENST00000560447 NBEAL1Q6ZS30 2694 aa6.24□□□□□ -1.41
RTF1-206ENST00000560447 NOTCH1P46531 2555 aa6.24□□□□□ -1.41
RTF1-206ENST00000560447 CCDC179H3BU77 68 aa6.23□□□□□ -1.41
RTF1-206ENST00000560447 PSCAO43653 123 aa6.23□□□□□ -1.41
RTF1-206ENST00000560447 COX7CP15954 63 aa6.23□□□□□ -1.41
RTF1-206ENST00000560447 Q6ZVQ6 151 aa6.23□□□□□ -1.41
RTF1-206ENST00000560447 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
RTF1-206ENST00000560447 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
RTF1-206ENST00000560447 REG3GQ6UW15 175 aa6.21□□□□□ -1.42
RTF1-206ENST00000560447 KRTAP7-1Q8IUC3 87 aa6.21□□□□□ -1.42
RTF1-206ENST00000560447 Q8N377 158 aa6.21□□□□□ -1.42
RTF1-206ENST00000560447 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.42
RTF1-206ENST00000560447 SERP2Q8N6R1 65 aa6.21□□□□□ -1.42
RTF1-206ENST00000560447 CRYGAP11844 174 aa6.2□□□□□ -1.42
RTF1-206ENST00000560447 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
RTF1-206ENST00000560447 KRTAP1-5Q9BYS1 174 aa6.2□□□□□ -1.42
RTF1-206ENST00000560447 NBDYA0A0U1RRE5 68 aa6.19□□□□□ -1.42
RTF1-206ENST00000560447 FAM168BA1KXE4 195 aa6.19□□□□□ -1.42
RTF1-206ENST00000560447 FAM19A5Q7Z5A7 132 aaPredicted RBP6.19□□□□□ -1.42
RTF1-206ENST00000560447 Q9BRP9 147 aa6.19□□□□□ -1.42
RTF1-206ENST00000560447 LINC00474Q9P2X8 69 aa6.19□□□□□ -1.42
RTF1-206ENST00000560447 RPL37AP8A6NKH3 93 aa6.18□□□□□ -1.42
RTF1-206ENST00000560447 H0Y9J4 135 aa6.18□□□□□ -1.42
RTF1-206ENST00000560447 C9orf153Q5TBE3 101 aa6.18□□□□□ -1.42
RTF1-206ENST00000560447 A0A096LNI7 61 aa6.17□□□□□ -1.42
RTF1-206ENST00000560447 M0R2N4 97 aa6.17□□□□□ -1.42
RTF1-206ENST00000560447 FUSP35637 526 aaKnown RBP eCLIP6.17□□□□□ -1.42
RTF1-206ENST00000560447 HAMPP81172 84 aa6.17□□□□□ -1.42
RTF1-206ENST00000560447 C9orf163Q8N9P6 203 aa6.17□□□□□ -1.42
RTF1-206ENST00000560447 A0A087WVE0 104 aa6.16□□□□□ -1.42
RTF1-206ENST00000560447 UBE2BP63146 152 aa6.16□□□□□ -1.42
RTF1-206ENST00000560447 VPS13DQ5THJ4 4388 aa6.15□□□□□ -1.42
RTF1-206ENST00000560447 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.42
RTF1-206ENST00000560447 FAM19A1Q7Z5A9 133 aa6.15□□□□□ -1.42
RTF1-206ENST00000560447 MGAM2Q2M2H8 2515 aa6.15□□□□□ -1.43
RTF1-206ENST00000560447 PLECQ15149 4684 aaKnown RBP6.14□□□□□ -1.43
RTF1-206ENST00000560447 IGLV8-61A0A075B6I0 122 aa6.14□□□□□ -1.43
RTF1-206ENST00000560447 NREPQ16612 68 aa6.14□□□□□ -1.43
RTF1-206ENST00000560447 Q6ZRN7 208 aaPredicted RBP6.14□□□□□ -1.43
RTF1-206ENST00000560447 Q8NBF4 154 aa6.14□□□□□ -1.43
RTF1-206ENST00000560447 SPRR4Q96PI1 79 aa6.14□□□□□ -1.43
RTF1-206ENST00000560447 TRAV7A0A075B6U4 112 aa6.13□□□□□ -1.43
RTF1-206ENST00000560447 F8WEM9 126 aa6.13□□□□□ -1.43
RTF1-206ENST00000560447 C1orf137Q5JT78 98 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms