RNA–Protein interactions for RNA: ENST00000559214.1

AC087477.3-201, humanhuman

TSL 4 BASIC

Gene AC087477.3, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.3-201ENST00000559214 MYMXA0A1B0GTQ4 84 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST1H2BKO60814 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 DPM2O94777 84 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST1H2BJP06899 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST1H2BOP23527 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST1H2BBP33778 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST1H2BDP58876 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST1H2BCP62807 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HERV-K104P63124 156 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST2H2BEQ16778 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 KRTAP13-2Q52LG2 175 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 SFTA2Q6UW10 78 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 TYMSOSQ8TAI1 123 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST1H2BHQ93079 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST1H2BNQ99877 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 HIST1H2BMQ99879 126 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 MAP1LC3CQ9BXW4 147 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 PAM16Q9Y3D7 125 aa3.09□□□□□ -1.91
AC087477.3-201ENST00000559214 LRP2P98164 4655 aa3.08□□□□□ -1.92
AC087477.3-201ENST00000559214 J3QQQ9 107 aa3.08□□□□□ -1.92
AC087477.3-201ENST00000559214 CRYGAP11844 174 aa3.08□□□□□ -1.92
AC087477.3-201ENST00000559214 PLNP26678 52 aa3.08□□□□□ -1.92
AC087477.3-201ENST00000559214 PRR4Q16378 134 aa3.08□□□□□ -1.92
AC087477.3-201ENST00000559214 ADAMTSL4-AS1Q5T5F5 129 aa3.08□□□□□ -1.92
AC087477.3-201ENST00000559214 PLEKHB2Q96CS7 222 aa3.08□□□□□ -1.92
AC087477.3-201ENST00000559214 HIGD2AQ9BW72 106 aa3.08□□□□□ -1.92
AC087477.3-201ENST00000559214 TRBV10-3A0A0K0K1G6 114 aa3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 SYS1-DBNDD2H3BUS1 97 aa3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 LGALS3P17931 250 aaKnown RBP3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 RPL13AP40429 203 aaKnown RBP3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 HERVK_113P61574 105 aa3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 SNRPEP62304 92 aaKnown RBP3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 C3orf22Q8N5N4 141 aa3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 SMCR5Q8TEV8 140 aa3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 TTTY13Q9BZ97 58 aa3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 PPDPFQ9H3Y8 114 aa3.07□□□□□ -1.92
AC087477.3-201ENST00000559214 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
AC087477.3-201ENST00000559214 IGKV2D-26A0A0A0MRZ7 120 aa3.06□□□□□ -1.92
AC087477.3-201ENST00000559214 A0A0J9YXY3 114 aa3.06□□□□□ -1.92
AC087477.3-201ENST00000559214 LINC00587B1AMM8 73 aa3.06□□□□□ -1.92
AC087477.3-201ENST00000559214 E9PLD3 99 aa3.06□□□□□ -1.92
AC087477.3-201ENST00000559214 C3orf79P0CE67 100 aa3.06□□□□□ -1.92
AC087477.3-201ENST00000559214 KRTDAPP60985 99 aa3.06□□□□□ -1.92
AC087477.3-201ENST00000559214 SOSTDC1Q6X4U4 206 aa3.06□□□□□ -1.92
AC087477.3-201ENST00000559214 LOC107984156A0A0G2JMH3 177 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 ETDCA0A1B0GVM5 59 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 A4D1N5 150 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 ERC2-IT1O76042 136 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 DDTP30046 118 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 LINC01545Q5VT33 79 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 GAGE2AQ6NT46 116 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 ARL17AQ8IVW1 177 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 ATOH7Q8N100 152 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 SPRR4Q96PI1 79 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 RETNLBQ9BQ08 111 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 KCNQ1DNQ9H478 68 aa3.05□□□□□ -1.92
AC087477.3-201ENST00000559214 KRTAP4-16G5E9R7 235 aaPredicted RBP3.04□□□□□ -1.92
AC087477.3-201ENST00000559214 SPRR1AP35321 89 aa3.04□□□□□ -1.92
AC087477.3-201ENST00000559214 NMUP48645 174 aa3.04□□□□□ -1.92
AC087477.3-201ENST00000559214 FAM229BQ4G0N7 80 aa3.04□□□□□ -1.92
AC087477.3-201ENST00000559214 S100A7L2Q5SY68 101 aa3.04□□□□□ -1.92
AC087477.3-201ENST00000559214 LINC00337Q8N6G1 96 aa3.04□□□□□ -1.92
AC087477.3-201ENST00000559214 LINC00304Q8N9R0 145 aa3.04□□□□□ -1.92
AC087477.3-201ENST00000559214 MIEN1Q9BRT3 115 aa3.04□□□□□ -1.92
AC087477.3-201ENST00000559214 ZNF815PA8K554 130 aa3.03□□□□□ -1.92
AC087477.3-201ENST00000559214 SEC61BP60468 96 aaKnown RBP3.03□□□□□ -1.92
AC087477.3-201ENST00000559214 UBE2V1Q13404 147 aa3.03□□□□□ -1.92
AC087477.3-201ENST00000559214 COA6Q5JTJ3 125 aaKnown RBP3.03□□□□□ -1.92
AC087477.3-201ENST00000559214 OR13C6PQ8NH95 151 aa3.03□□□□□ -1.92
AC087477.3-201ENST00000559214 LINC00308Q8TCZ7 52 aa3.03□□□□□ -1.92
AC087477.3-201ENST00000559214 LITAFQ99732 161 aa3.03□□□□□ -1.92
AC087477.3-201ENST00000559214 SPANXB1Q9NS25 103 aaPredicted RBP3.03□□□□□ -1.92
AC087477.3-201ENST00000559214 TRAV23DV6A0A075B6W5 121 aa3.02□□□□□ -1.93
AC087477.3-201ENST00000559214 TRBV10-2A0A0K0K1G8 114 aa3.02□□□□□ -1.93
AC087477.3-201ENST00000559214 NDUFC2O95298 119 aa3.02□□□□□ -1.93
AC087477.3-201ENST00000559214 IGLV6-57P01721 117 aa3.02□□□□□ -1.93
AC087477.3-201ENST00000559214 S100A12P80511 92 aa3.02□□□□□ -1.93
AC087477.3-201ENST00000559214 Q9BRP9 147 aa3.02□□□□□ -1.93
AC087477.3-201ENST00000559214 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
AC087477.3-201ENST00000559214 IGLV9-49A0A0B4J1Y8 123 aa3.01□□□□□ -1.93
AC087477.3-201ENST00000559214 PCP2Q8IVA1 136 aa3.01□□□□□ -1.93
AC087477.3-201ENST00000559214 ST20-AS1Q8NBB2 130 aa3.01□□□□□ -1.93
AC087477.3-201ENST00000559214 Q8NBF4 154 aa3.01□□□□□ -1.93
AC087477.3-201ENST00000559214 ZNF706Q9Y5V0 76 aaPredicted RBP3.01□□□□□ -1.93
AC087477.3-201ENST00000559214 MUC2Q02817 5179 aa3□□□□□ -1.93
AC087477.3-201ENST00000559214 ZNF73O43830 326 aaPredicted RBP3□□□□□ -1.93
AC087477.3-201ENST00000559214 TIMM17BO60830 172 aa3□□□□□ -1.93
AC087477.3-201ENST00000559214 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
AC087477.3-201ENST00000559214 SCGB1D4Q6XE38 83 aa3□□□□□ -1.93
AC087477.3-201ENST00000559214 Q6ZRX8 168 aa3□□□□□ -1.93
AC087477.3-201ENST00000559214 MUSTN1Q8IVN3 82 aa3□□□□□ -1.93
AC087477.3-201ENST00000559214 HIST3H2BBQ8N257 126 aa3□□□□□ -1.93
AC087477.3-201ENST00000559214 SPANXCQ9NY87 97 aa3□□□□□ -1.93
AC087477.3-201ENST00000559214 IGLV7-46A0A075B6I9 117 aa2.99□□□□□ -1.93
AC087477.3-201ENST00000559214 C20orf202A1L168 122 aa2.99□□□□□ -1.93
AC087477.3-201ENST00000559214 C5orf52A6NGY3 159 aa2.99□□□□□ -1.93
AC087477.3-201ENST00000559214 S100A1P23297 94 aa2.99□□□□□ -1.93
AC087477.3-201ENST00000559214 S100A2P29034 98 aa2.99□□□□□ -1.93
AC087477.3-201ENST00000559214 HINT1P49773 126 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms