RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 A0A1W2PNN7 141 aa11.32□□□□□ -0.6
PTPN21-208ENST00000556564 C7orf65Q6ZTY9 151 aa11.31□□□□□ -0.6
PTPN21-208ENST00000556564 AKAP13Q12802 2813 aa11.31□□□□□ -0.6
PTPN21-208ENST00000556564 CFAP46Q8IYW2 2715 aa11.31□□□□□ -0.6
PTPN21-208ENST00000556564 C1orf64Q8NEQ6 169 aa11.31□□□□□ -0.6
PTPN21-208ENST00000556564 ZNF861PO60384 105 aa11.31□□□□□ -0.6
PTPN21-208ENST00000556564 TNP2Q05952 138 aa11.3□□□□□ -0.6
PTPN21-208ENST00000556564 ANAPC11Q9NYG5 84 aa11.3□□□□□ -0.6
PTPN21-208ENST00000556564 ZNF292O60281 2723 aa11.29□□□□□ -0.6
PTPN21-208ENST00000556564 V9GYY9 64 aa11.28□□□□□ -0.6
PTPN21-208ENST00000556564 SMCPP49901 116 aaPredicted RBP11.28□□□□□ -0.6
PTPN21-208ENST00000556564 LINC00304Q8N9R0 145 aa11.28□□□□□ -0.6
PTPN21-208ENST00000556564 TRBV7-7A0A0K0K1E9 115 aa11.28□□□□□ -0.6
PTPN21-208ENST00000556564 EIF4EBP3O60516 100 aaPredicted RBP11.28□□□□□ -0.6
PTPN21-208ENST00000556564 LINC00528Q8N1L1 170 aa11.27□□□□□ -0.61
PTPN21-208ENST00000556564 TLX1NBP0CAT3 122 aa11.26□□□□□ -0.61
PTPN21-208ENST00000556564 LOC110117498A0A087WWA1 95 aa11.26□□□□□ -0.61
PTPN21-208ENST00000556564 A6NED7 52 aa11.26□□□□□ -0.61
PTPN21-208ENST00000556564 PSORS1C2Q9UIG4 136 aa11.25□□□□□ -0.61
PTPN21-208ENST00000556564 ATP11AUNQ6ZP68 121 aa11.25□□□□□ -0.61
PTPN21-208ENST00000556564 IGLV7-43P04211 117 aa11.24□□□□□ -0.61
PTPN21-208ENST00000556564 WDFY4Q6ZS81 3184 aa11.24□□□□□ -0.61
PTPN21-208ENST00000556564 WIPF1O43516 503 aa11.24□□□□□ -0.61
PTPN21-208ENST00000556564 CNBPP62633 177 aaKnown RBP11.24□□□□□ -0.61
PTPN21-208ENST00000556564 USP24Q9UPU5 2620 aa11.23□□□□□ -0.61
PTPN21-208ENST00000556564 C9orf92A6NGG3 77 aa11.22□□□□□ -0.61
PTPN21-208ENST00000556564 TMEM254Q8TBM7 123 aa11.22□□□□□ -0.61
PTPN21-208ENST00000556564 SVIPQ8NHG7 77 aa11.21□□□□□ -0.61
PTPN21-208ENST00000556564 A0A0G2JQZ4 141 aa11.21□□□□□ -0.61
PTPN21-208ENST00000556564 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
PTPN21-208ENST00000556564 TP53AIP1Q9HCN2 124 aa11.2□□□□□ -0.62
PTPN21-208ENST00000556564 A0A1B0GW54 56 aa11.19□□□□□ -0.62
PTPN21-208ENST00000556564 TRBV7-4A0A0J9YYF1 115 aa11.19□□□□□ -0.62
PTPN21-208ENST00000556564 IGFL1Q6UW32 110 aa11.19□□□□□ -0.62
PTPN21-208ENST00000556564 A0A0C4DFX4 3053 aa11.18□□□□□ -0.62
PTPN21-208ENST00000556564 CFAP54Q96N23 3096 aa11.17□□□□□ -0.62
PTPN21-208ENST00000556564 CDIP1Q9H305 208 aa11.17□□□□□ -0.62
PTPN21-208ENST00000556564 DSCR10P59022 87 aa11.16□□□□□ -0.62
PTPN21-208ENST00000556564 PRO0461Q9UI25 63 aa11.16□□□□□ -0.62
PTPN21-208ENST00000556564 MGAM2Q2M2H8 2515 aa11.15□□□□□ -0.62
PTPN21-208ENST00000556564 Q8N377 158 aa11.13□□□□□ -0.63
PTPN21-208ENST00000556564 SPAG11AQ6PDA7 123 aa11.13□□□□□ -0.63
PTPN21-208ENST00000556564 A8MWP4 228 aa11.12□□□□□ -0.63
PTPN21-208ENST00000556564 TRIOO75962 3097 aa11.12□□□□□ -0.63
PTPN21-208ENST00000556564 OBSCN-AS1Q96MR7 158 aa11.12□□□□□ -0.63
PTPN21-208ENST00000556564 SSBP3-AS1Q7Z2R9 100 aa11.11□□□□□ -0.63
PTPN21-208ENST00000556564 K7EQZ3 153 aa11.1□□□□□ -0.63
PTPN21-208ENST00000556564 COX6B2Q6YFQ2 88 aa11.1□□□□□ -0.63
PTPN21-208ENST00000556564 ERC2-IT1O76042 136 aa11.1□□□□□ -0.63
PTPN21-208ENST00000556564 C8orf87E5RJ46 101 aa11.1□□□□□ -0.63
PTPN21-208ENST00000556564 A0A0U1RQV1 116 aa11.09□□□□□ -0.63
PTPN21-208ENST00000556564 DNAH14Q0VDD8 3507 aa11.09□□□□□ -0.63
PTPN21-208ENST00000556564 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.09□□□□□ -0.63
PTPN21-208ENST00000556564 SPTBN5Q9NRC6 3674 aaKnown RBP11.08□□□□□ -0.64
PTPN21-208ENST00000556564 SPRR4Q96PI1 79 aa11.08□□□□□ -0.64
PTPN21-208ENST00000556564 TNRC18O15417 2968 aaPredicted RBP11.07□□□□□ -0.64
PTPN21-208ENST00000556564 ATRQ13535 2644 aa11.07□□□□□ -0.64
PTPN21-208ENST00000556564 MRPL34Q9BQ48 92 aaKnown RBP11.06□□□□□ -0.64
PTPN21-208ENST00000556564 TRAV22A0A0B4J277 110 aa11.05□□□□□ -0.64
PTPN21-208ENST00000556564 ACYP2P14621 99 aa11.03□□□□□ -0.64
PTPN21-208ENST00000556564 SMIM26A0A096LP01 95 aa11.03□□□□□ -0.64
PTPN21-208ENST00000556564 PSPHP1O15172 72 aa11.03□□□□□ -0.64
PTPN21-208ENST00000556564 DSPP15924 2871 aaKnown RBP11.03□□□□□ -0.64
PTPN21-208ENST00000556564 CENPEQ02224 2701 aa11.03□□□□□ -0.64
PTPN21-208ENST00000556564 MAST4O15021 2626 aa11.02□□□□□ -0.65
PTPN21-208ENST00000556564 COL6A3P12111 3177 aa11.02□□□□□ -0.65
PTPN21-208ENST00000556564 CELSR3Q9NYQ7 3312 aa11.01□□□□□ -0.65
PTPN21-208ENST00000556564 C8orf17Q9NRJ1 99 aa10.98□□□□□ -0.65
PTPN21-208ENST00000556564 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
PTPN21-208ENST00000556564 IGSF10Q6WRI0 2623 aa10.97□□□□□ -0.65
PTPN21-208ENST00000556564 A0A1B0GVX0 72 aa10.97□□□□□ -0.65
PTPN21-208ENST00000556564 VPS13AQ96RL7 3174 aa10.95□□□□□ -0.66
PTPN21-208ENST00000556564 PRR26Q8N8Z3 221 aa10.94□□□□□ -0.66
PTPN21-208ENST00000556564 VCANP13611 3396 aa10.94□□□□□ -0.66
PTPN21-208ENST00000556564 LAMA1P25391 3075 aa10.93□□□□□ -0.66
PTPN21-208ENST00000556564 PRR15Q8IV56 129 aa10.93□□□□□ -0.66
PTPN21-208ENST00000556564 FAM104AQ969W3 186 aa10.93□□□□□ -0.66
PTPN21-208ENST00000556564 A0A1B0GU69 56 aa10.92□□□□□ -0.66
PTPN21-208ENST00000556564 LOC101927531A0A1B0GV80 90 aa10.91□□□□□ -0.66
PTPN21-208ENST00000556564 H3BPC8 53 aa10.91□□□□□ -0.66
PTPN21-208ENST00000556564 BAHCC1Q9P281 2608 aa10.9□□□□□ -0.66
PTPN21-208ENST00000556564 KRTAP1-5Q9BYS1 174 aa10.9□□□□□ -0.66
PTPN21-208ENST00000556564 LCE6AA0A183 80 aa10.9□□□□□ -0.66
PTPN21-208ENST00000556564 TEP1Q99973 2627 aaKnown RBP10.86□□□□□ -0.67
PTPN21-208ENST00000556564 IGLV8-61A0A075B6I0 122 aa10.85□□□□□ -0.67
PTPN21-208ENST00000556564 PLAC8Q9NZF1 115 aa10.85□□□□□ -0.67
PTPN21-208ENST00000556564 A0A1W2PNM2 257 aa10.84□□□□□ -0.67
PTPN21-208ENST00000556564 IGLV7-46A0A075B6I9 117 aa10.79□□□□□ -0.68
PTPN21-208ENST00000556564 EYSQ5T1H1 3165 aa10.79□□□□□ -0.68
PTPN21-208ENST00000556564 KRTAP10-2P60368 255 aa10.79□□□□□ -0.68
PTPN21-208ENST00000556564 RBM12B-AS1Q9P1G2 102 aa10.78□□□□□ -0.68
PTPN21-208ENST00000556564 Q5VSD8 79 aa10.77□□□□□ -0.69
PTPN21-208ENST00000556564 TEX15Q9BXT5 2789 aa10.76□□□□□ -0.69
PTPN21-208ENST00000556564 KRTAP10-1P60331 282 aa10.76□□□□□ -0.69
PTPN21-208ENST00000556564 Q8NDZ9 215 aa10.72□□□□□ -0.69
PTPN21-208ENST00000556564 PMAIP1Q13794 54 aa10.72□□□□□ -0.69
PTPN21-208ENST00000556564 UNC79Q9P2D8 2635 aa10.72□□□□□ -0.69
PTPN21-208ENST00000556564 IGLV5-48A0A075B6I7 105 aa10.71□□□□□ -0.7
PTPN21-208ENST00000556564 CD164Q04900 197 aa10.7□□□□□ -0.7
PTPN21-208ENST00000556564 Q6ZSA8 131 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms