RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PDE6GP18545 87 aa4.52□□□□□ -1.69
LINC-ROR-201ENST00000553704 CXCL6P80162 114 aa4.52□□□□□ -1.69
LINC-ROR-201ENST00000553704 SYCNQ0VAF6 134 aa4.52□□□□□ -1.69
LINC-ROR-201ENST00000553704 LYSTQ99698 3801 aa4.52□□□□□ -1.69
LINC-ROR-201ENST00000553704 F8P00451 2351 aa4.51□□□□□ -1.69
LINC-ROR-201ENST00000553704 J3QL48 77 aa4.51□□□□□ -1.69
LINC-ROR-201ENST00000553704 Q8N9L7 120 aa4.51□□□□□ -1.69
LINC-ROR-201ENST00000553704 MRAPQ8TCY5 172 aa4.51□□□□□ -1.69
LINC-ROR-201ENST00000553704 C7orf33Q8WU49 177 aa4.51□□□□□ -1.69
LINC-ROR-201ENST00000553704 NOTCH1P46531 2555 aa4.51□□□□□ -1.69
LINC-ROR-201ENST00000553704 MAST4O15021 2626 aa4.51□□□□□ -1.69
LINC-ROR-201ENST00000553704 FAM168BA1KXE4 195 aa4.51□□□□□ -1.69
LINC-ROR-201ENST00000553704 H3BQ85 93 aa4.51□□□□□ -1.69
LINC-ROR-201ENST00000553704 V9GYY9 64 aa4.5□□□□□ -1.69
LINC-ROR-201ENST00000553704 DNAH10Q8IVF4 4471 aa4.5□□□□□ -1.69
LINC-ROR-201ENST00000553704 TRAV7A0A075B6U4 112 aa4.5□□□□□ -1.69
LINC-ROR-201ENST00000553704 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
LINC-ROR-201ENST00000553704 KRTAP24-1Q3LI83 254 aa4.5□□□□□ -1.69
LINC-ROR-201ENST00000553704 DEFB105AQ8NG35 78 aa4.5□□□□□ -1.69
LINC-ROR-201ENST00000553704 C11orf45Q8TAV5 145 aa4.5□□□□□ -1.69
LINC-ROR-201ENST00000553704 TM2D3Q9BRN9 247 aa4.5□□□□□ -1.69
LINC-ROR-201ENST00000553704 RPL37AP8A6NKH3 93 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 C3orf84H3BNL1 204 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 KRTAP7-1Q8IUC3 87 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 NKAPP1Q8N9T2 125 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 KCNQ1DNQ9H478 68 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 SNURFQ9Y675 71 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 H7BZZ5 65 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 Q8N377 158 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 RMI2Q96E14 147 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 BAHCC1Q9P281 2608 aa4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 HUWE1Q7Z6Z7 4374 aaKnown RBP4.49□□□□□ -1.69
LINC-ROR-201ENST00000553704 BPY2O14599 106 aa4.48□□□□□ -1.69
LINC-ROR-201ENST00000553704 PRB2P02812 416 aaPredicted RBP4.48□□□□□ -1.69
LINC-ROR-201ENST00000553704 DNAH10OSP0CZ25 163 aa4.48□□□□□ -1.69
LINC-ROR-201ENST00000553704 Q9BRP9 147 aa4.48□□□□□ -1.69
LINC-ROR-201ENST00000553704 LINC00588Q9Y4M8 146 aa4.48□□□□□ -1.69
LINC-ROR-201ENST00000553704 IGKV4-1P06312 121 aa4.47□□□□□ -1.69
LINC-ROR-201ENST00000553704 FAM236DA0A1B0GTK5 79 aa4.47□□□□□ -1.69
LINC-ROR-201ENST00000553704 KRTAP4-16G5E9R7 235 aaPredicted RBP4.47□□□□□ -1.69
LINC-ROR-201ENST00000553704 FAM236CP0DP71 79 aa4.47□□□□□ -1.69
LINC-ROR-201ENST00000553704 ST20-AS1Q8NBB2 130 aa4.47□□□□□ -1.69
LINC-ROR-201ENST00000553704 NBEAL1Q6ZS30 2694 aa4.47□□□□□ -1.69
LINC-ROR-201ENST00000553704 BCE1O60756 84 aa4.46□□□□□ -1.69
LINC-ROR-201ENST00000553704 KLKP1Q107X0 134 aa4.46□□□□□ -1.69
LINC-ROR-201ENST00000553704 Q6ZRX8 168 aa4.46□□□□□ -1.69
LINC-ROR-201ENST00000553704 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
LINC-ROR-201ENST00000553704 Q5XG85 94 aa4.45□□□□□ -1.7
LINC-ROR-201ENST00000553704 DNAH9Q9NYC9 4486 aa4.45□□□□□ -1.7
LINC-ROR-201ENST00000553704 IGLV1-50A0A075B6I6 118 aa4.45□□□□□ -1.7
LINC-ROR-201ENST00000553704 IGLV5-48A0A075B6I7 105 aa4.45□□□□□ -1.7
LINC-ROR-201ENST00000553704 F8WEM9 126 aa4.45□□□□□ -1.7
LINC-ROR-201ENST00000553704 ERC2-IT1O76042 136 aa4.45□□□□□ -1.7
LINC-ROR-201ENST00000553704 NREPQ16612 68 aa4.45□□□□□ -1.7
LINC-ROR-201ENST00000553704 A0A1W2PNM2 257 aa4.44□□□□□ -1.7
LINC-ROR-201ENST00000553704 SPRR1AP35321 89 aa4.44□□□□□ -1.7
LINC-ROR-201ENST00000553704 TNP2Q05952 138 aa4.44□□□□□ -1.7
LINC-ROR-201ENST00000553704 C4orf26Q17RF5 130 aa4.44□□□□□ -1.7
LINC-ROR-201ENST00000553704 PLA2G2DQ9UNK4 145 aa4.44□□□□□ -1.7
LINC-ROR-201ENST00000553704 IGLV5-37A0A075B6J1 123 aa4.43□□□□□ -1.7
LINC-ROR-201ENST00000553704 PRYO14603 147 aa4.43□□□□□ -1.7
LINC-ROR-201ENST00000553704 ETDCA0A1B0GVM5 59 aa4.43□□□□□ -1.7
LINC-ROR-201ENST00000553704 DHRS4-AS1Q9P1J3 65 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 COL6A5A8TX70 2615 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 A0A0G2JQZ4 141 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 A0A1W2PNN7 141 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 EPM2AB3EWF7 344 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 C1orf137Q5JT78 98 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 MRPL55Q7Z7F7 128 aaKnown RBP4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 OCR1Q9BZK8 76 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 COL7A1Q02388 2944 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 DNAH7Q8WXX0 4024 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 TMEM254Q8TBM7 123 aa4.42□□□□□ -1.7
LINC-ROR-201ENST00000553704 HRCT1Q6UXD1 115 aa4.41□□□□□ -1.7
LINC-ROR-201ENST00000553704 KRTAP1-5Q9BYS1 174 aa4.41□□□□□ -1.7
LINC-ROR-201ENST00000553704 H3BS24 57 aa4.41□□□□□ -1.7
LINC-ROR-201ENST00000553704 Q8NBF4 154 aa4.41□□□□□ -1.7
LINC-ROR-201ENST00000553704 CSMD3Q7Z407 3707 aa4.4□□□□□ -1.7
LINC-ROR-201ENST00000553704 FUSP35637 526 aaKnown RBP eCLIP4.4□□□□□ -1.7
LINC-ROR-201ENST00000553704 UBE2BP63146 152 aa4.4□□□□□ -1.7
LINC-ROR-201ENST00000553704 SMIM29Q86T20 159 aa4.4□□□□□ -1.7
LINC-ROR-201ENST00000553704 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.7
LINC-ROR-201ENST00000553704 K7EIL1 84 aa4.4□□□□□ -1.71
LINC-ROR-201ENST00000553704 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
LINC-ROR-201ENST00000553704 A0A096LNI7 61 aa4.39□□□□□ -1.71
LINC-ROR-201ENST00000553704 A0A0U1RQV1 116 aa4.39□□□□□ -1.71
LINC-ROR-201ENST00000553704 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
LINC-ROR-201ENST00000553704 DSCR10P59022 87 aa4.39□□□□□ -1.71
LINC-ROR-201ENST00000553704 PRLHP81277 87 aa4.39□□□□□ -1.71
LINC-ROR-201ENST00000553704 REG3GQ6UW15 175 aa4.39□□□□□ -1.71
LINC-ROR-201ENST00000553704 LINC00336Q6ZUF6 198 aa4.39□□□□□ -1.71
LINC-ROR-201ENST00000553704 FAM30AQ9NZY2 134 aa4.39□□□□□ -1.71
LINC-ROR-201ENST00000553704 IGKV2-24A0A0C4DH68 120 aa4.38□□□□□ -1.71
LINC-ROR-201ENST00000553704 LINC00476Q8WZB0 136 aa4.38□□□□□ -1.71
LINC-ROR-201ENST00000553704 SPRR4Q96PI1 79 aa4.38□□□□□ -1.71
LINC-ROR-201ENST00000553704 HIGD2AQ9BW72 106 aa4.38□□□□□ -1.71
LINC-ROR-201ENST00000553704 SRRM2Q9UQ35 2752 aaKnown RBP4.38□□□□□ -1.71
LINC-ROR-201ENST00000553704 K7EQZ3 153 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms