RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 DEFB121Q5J5C9 76 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 FAM167A-AS1Q96KT0 104 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 AQP10Q96PS8 301 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 PDCD10Q9BUL8 212 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 PSENENQ9NZ42 101 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 HLA-DRB4X5D2U9 266 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 HERC2O95714 4834 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 MUC4Q99102 2169 aa0.9□□□□□ -2.26
SYNE2-210ENST00000553455 TRBV6-1A0A0K0K1D8 114 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 TMEM189A5PLL7 270 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 CEBPZOSA8MTT3 80 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 H3BQ15 152 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 K7EP13 123 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 NBEAP1P0C6P0 100 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 APELAP0DMC3 54 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 SNRPD3P62318 126 aaKnown RBP0.9□□□□□ -2.27
SYNE2-210ENST00000553455 Q56UQ5 140 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 CASC2Q6XLA1 102 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 CYP2G1PQ6ZSU1 146 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.9□□□□□ -2.27
SYNE2-210ENST00000553455 PPP1R1CQ8WVI7 109 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 PFDN5Q99471 154 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 MGST2Q99735 147 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 PSMG3Q9BT73 122 aaPredicted RBP0.9□□□□□ -2.27
SYNE2-210ENST00000553455 RPRMQ9NS64 109 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 RABAC1Q9UI14 185 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 APLNQ9ULZ1 77 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 ARL2-SNX15V9GYD0 113 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 TNXBP22105 4242 aa0.9□□□□□ -2.27
SYNE2-210ENST00000553455 ABCA13Q86UQ4 5058 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 LOC107984640A0A0U1RRK4 108 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 LCE6AA0A183 80 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 FAM24AA6NFZ4 105 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 UMAD1C9J7I0 102 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 SPINK4O60575 86 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 DEFB131AP59861 70 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 RRAS2P62070 204 aaPredicted RBP0.89□□□□□ -2.27
SYNE2-210ENST00000553455 Q5BKY6 102 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 C10orf113Q5VZT2 155 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 MIC13Q5XKP0 118 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 Q6AWC8 147 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 SMIM15Q7Z3B0 74 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 TCTE3Q8IZS6 198 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 OR8I2Q8N0Y5 310 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 KCNRGQ8N5I3 272 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 TCEAL7Q9BRU2 100 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 AGPAT4-IT1Q9H0P7 198 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 GSKIPQ9P0R6 139 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 HIGD1AQ9Y241 93 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 HSPB11Q9Y547 144 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
SYNE2-210ENST00000553455 FAT1Q14517 4588 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 FAT3Q8TDW7 4589 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 NUPR2A6NF83 97 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 ZNF727A8MUV8 499 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 SSSCA1O60232 199 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 SIX6O95475 246 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 SPART-AS1P0CW21 52 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 IAPPP10997 89 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 CRIP1P50238 77 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 DEFA5Q01523 94 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 SPINK9Q5DT21 86 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 PSMG4Q5JS54 123 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 C5orf17Q8NAS9 161 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 DYNLRB2Q8TF09 96 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 TMEM263Q8WUH6 116 aaKnown RBP0.88□□□□□ -2.27
SYNE2-210ENST00000553455 TMEM167BQ9NRX6 74 aa0.88□□□□□ -2.27
SYNE2-210ENST00000553455 TIMM8BQ9Y5J9 83 aaPredicted RBP0.88□□□□□ -2.27
SYNE2-210ENST00000553455 SRRM2Q9UQ35 2752 aaKnown RBP0.88□□□□□ -2.27
SYNE2-210ENST00000553455 KIAA1109Q2LD37 5005 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 PCLOQ9Y6V0 5065 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 BORCS7-ASMTA0A0B4J1R7 106 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 TRAV21A0A0B4J279 112 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 CTXND1A0A1B0GTU2 59 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 IGHV3-30P01768 117 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 TCRAP04437 139 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 LINC00694P0DN24 101 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 IGHV3-30-5P0DP03 117 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 FGF7P21781 194 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 HIST1H1AQ02539 215 aaPredicted RBP0.87□□□□□ -2.27
SYNE2-210ENST00000553455 DEFB135Q30KP9 77 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 RPL7L1Q6DKI1 246 aaKnown RBP0.87□□□□□ -2.27
SYNE2-210ENST00000553455 LYPD5Q6UWN5 251 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 C9orf62Q8N4C0 152 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 CNFNQ9BYD5 112 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 SLC35B3Q9H1N7 401 aa0.87□□□□□ -2.27
SYNE2-210ENST00000553455 DEFB131BA0A096LNP1 70 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 A0A096LPF7 62 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 TRAV12-3A0A0B4J271 114 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 TRBV10-1A0A0K0K1A3 114 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 TRBV30A0A0K0K1B3 111 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 A6NN06 94 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 F2Z2F3 143 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 F6UZH7 168 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 M0R2P5 195 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 M0R3E3 92 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 IGLC6P0CF74 106 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 PYYP10082 97 aa0.86□□□□□ -2.27
SYNE2-210ENST00000553455 GCHFRP30047 84 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms